RNA–Protein interactions for RNA: ENST00000610738.5

COLCA2-204, Transcript of colorectal cancer associated 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLCA2, Length 975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-204ENST00000610738 ZEB1P37275 1124 aaPredicted RBP21.35■■□□□ 1.01
COLCA2-204ENST00000610738 APLP1P51693 650 aa21.35■■□□□ 1.01
COLCA2-204ENST00000610738 ARFGEF2Q9Y6D5 1785 aa21.35■■□□□ 1.01
COLCA2-204ENST00000610738 DDNO94850 711 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-204ENST00000610738 HCLS1P14317 486 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-204ENST00000610738 C16orf71Q8IYS4 520 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-204ENST00000610738 SNED1Q8TER0 1413 aa21.34■■□□□ 1.01
COLCA2-204ENST00000610738 IBTKQ9P2D0 1353 aaPredicted RBP21.34■■□□□ 1.01
COLCA2-204ENST00000610738 NLRP10Q86W26 655 aa21.33■■□□□ 1.01
COLCA2-204ENST00000610738 C8orf58Q8NAV2 365 aa21.33■■□□□ 1.01
COLCA2-204ENST00000610738 UTP14AQ9BVJ6 771 aaKnown RBP21.33■■□□□ 1.01
COLCA2-204ENST00000610738 FKBP4Q02790 459 aaKnown RBP eCLIP21.32■■□□□ 1
COLCA2-204ENST00000610738 RPGRQ92834 1020 aaKnown RBP21.32■■□□□ 1
COLCA2-204ENST00000610738 ZNF541Q9H0D2 1346 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 COL4A5P29400 1685 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 ATP5J2-PTCD1G3V325 749 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 POTEIP0CG38 1075 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 POTEJP0CG39 1038 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 FSTL1Q12841 308 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 TCIRG1Q13488 830 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 PARP10Q53GL7 1025 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 PPP1R42Q7Z4L9 355 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 TSPYL6Q8N831 410 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
COLCA2-204ENST00000610738 IFT57Q9NWB7 429 aa21.31■■□□□ 1
COLCA2-204ENST00000610738 RIC1Q4ADV7 1423 aa21.3■■□□□ 1
COLCA2-204ENST00000610738 SOGA3Q5TF21 947 aa21.3■■□□□ 1
COLCA2-204ENST00000610738 PHAXQ9H814 394 aaKnown RBP21.3■■□□□ 1
COLCA2-204ENST00000610738 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
COLCA2-204ENST00000610738 ALDH1B1P30837 517 aa21.29■■□□□ 1
COLCA2-204ENST00000610738 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
COLCA2-204ENST00000610738 MRS2Q9HD23 443 aa21.29■■□□□ 1
COLCA2-204ENST00000610738 HOXB7P09629 217 aa21.28■■□□□ 1
COLCA2-204ENST00000610738 RTL5Q5HYW3 569 aaPredicted RBP21.28■■□□□ 1
COLCA2-204ENST00000610738 DBF4Q9UBU7 674 aaPredicted RBP21.28■■□□□ 1
COLCA2-204ENST00000610738 TRMT112Q9UI30 125 aaKnown RBP21.28■■□□□ 1
COLCA2-204ENST00000610738 PPEF1O14829 653 aaPredicted RBP21.27■■□□□ 1
COLCA2-204ENST00000610738 GNAI1P63096 354 aa21.27■■□□□ 1
COLCA2-204ENST00000610738 PLBD2Q8NHP8 589 aa21.27■■□□□ 1
COLCA2-204ENST00000610738 SALL2Q9Y467 1007 aaPredicted RBP21.27■■□□□ 1
COLCA2-204ENST00000610738 DICER1Q9UPY3 1922 aaKnown RBP21.27■■□□□ 1
COLCA2-204ENST00000610738 ABCC4O15439 1325 aa21.27■□□□□ 0.99
COLCA2-204ENST00000610738 WDR90Q96KV7 1748 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 COL4A1P02462 1669 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
COLCA2-204ENST00000610738 SLC10A5Q5PT55 438 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 DPY19L2Q6NUT2 758 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 ANKRD13DQ6ZTN6 518 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 RBM17Q96I25 401 aaKnown RBP21.26■□□□□ 0.99
COLCA2-204ENST00000610738 NLRP3Q96P20 1036 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 CRAMP1Q96RY5 1269 aa21.26■□□□□ 0.99
COLCA2-204ENST00000610738 RTKN2Q8IZC4 609 aa21.25■□□□□ 0.99
COLCA2-204ENST00000610738 FAM89AQ96GI7 184 aa21.25■□□□□ 0.99
COLCA2-204ENST00000610738 ISCA1Q9BUE6 129 aa21.25■□□□□ 0.99
COLCA2-204ENST00000610738 ANKRD36CQ5JPF3 1778 aa21.25■□□□□ 0.99
COLCA2-204ENST00000610738 ANP32CO43423 234 aa21.24■□□□□ 0.99
COLCA2-204ENST00000610738 HSP90AB3PQ58FF7 597 aa21.24■□□□□ 0.99
COLCA2-204ENST00000610738 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
COLCA2-204ENST00000610738 JARID2Q92833 1246 aaPredicted RBP21.24■□□□□ 0.99
COLCA2-204ENST00000610738 WWC1Q8IX03 1113 aa21.23■□□□□ 0.99
COLCA2-204ENST00000610738 SMC1BQ8NDV3 1235 aa21.23■□□□□ 0.99
COLCA2-204ENST00000610738 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
COLCA2-204ENST00000610738 SH3TC1Q8TE82 1336 aa21.23■□□□□ 0.99
COLCA2-204ENST00000610738 LAMB2P55268 1798 aa21.21■□□□□ 0.99
COLCA2-204ENST00000610738 PSMD1Q99460 953 aa21.21■□□□□ 0.99
COLCA2-204ENST00000610738 FZD9O00144 591 aa21.2■□□□□ 0.98
COLCA2-204ENST00000610738 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
COLCA2-204ENST00000610738 RIC3Q7Z5B4 369 aa21.2■□□□□ 0.98
COLCA2-204ENST00000610738 MYD88Q99836 296 aa21.2■□□□□ 0.98
COLCA2-204ENST00000610738 RNF123Q5XPI4 1314 aa21.2■□□□□ 0.98
COLCA2-204ENST00000610738 AOC3Q16853 763 aa21.19■□□□□ 0.98
COLCA2-204ENST00000610738 ATP6V0A2Q9Y487 856 aa21.19■□□□□ 0.98
COLCA2-204ENST00000610738 G2E3Q7L622 706 aa21.18■□□□□ 0.98
COLCA2-204ENST00000610738 L3MBTL3Q96JM7 780 aaPredicted RBP21.18■□□□□ 0.98
COLCA2-204ENST00000610738 TAF1DQ9H5J8 278 aaPredicted RBP21.18■□□□□ 0.98
COLCA2-204ENST00000610738 DDX60Q8IY21 1712 aaKnown RBP21.18■□□□□ 0.98
COLCA2-204ENST00000610738 TAF1P21675 1872 aa21.18■□□□□ 0.98
COLCA2-204ENST00000610738 GOLGA2Q08379 1002 aa21.17■□□□□ 0.98
COLCA2-204ENST00000610738 IFFO2Q5TF58 517 aa21.17■□□□□ 0.98
COLCA2-204ENST00000610738 LARGE2Q8N3Y3 721 aa21.17■□□□□ 0.98
COLCA2-204ENST00000610738 CELF1Q92879 486 aaKnown RBP21.17■□□□□ 0.98
COLCA2-204ENST00000610738 SPINK5Q9NQ38 1064 aaPredicted RBP21.17■□□□□ 0.98
COLCA2-204ENST00000610738 GJA3Q9Y6H8 435 aa21.17■□□□□ 0.98
COLCA2-204ENST00000610738 GRAPQ13588 217 aa21.16■□□□□ 0.98
COLCA2-204ENST00000610738 CCDC27Q2M243 656 aa21.16■□□□□ 0.98
COLCA2-204ENST00000610738 CC2D2BQ6DHV5 1058 aa21.16■□□□□ 0.98
COLCA2-204ENST00000610738 GRAPLQ8TC17 118 aaPredicted RBP21.16■□□□□ 0.98
COLCA2-204ENST00000610738 IRS4O14654 1257 aaPredicted RBP21.15■□□□□ 0.98
COLCA2-204ENST00000610738 PPIP5K2O43314 1243 aa21.15■□□□□ 0.98
COLCA2-204ENST00000610738 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
COLCA2-204ENST00000610738 DDX46Q7L014 1031 aaKnown RBP21.15■□□□□ 0.98
COLCA2-204ENST00000610738 FAM9BQ8IZU0 186 aa21.15■□□□□ 0.98
COLCA2-204ENST00000610738 FANCIQ9NVI1 1328 aa21.14■□□□□ 0.97
COLCA2-204ENST00000610738 CCDC30Q5VVM6 783 aa21.14■□□□□ 0.97
COLCA2-204ENST00000610738 JDP2Q8WYK2 163 aa21.14■□□□□ 0.97
COLCA2-204ENST00000610738 KLRG1Q96E93 195 aa21.14■□□□□ 0.97
COLCA2-204ENST00000610738 CCDC85AQ96PX6 553 aaPredicted RBP21.14■□□□□ 0.97
COLCA2-204ENST00000610738 MAP3K2Q9Y2U5 619 aa21.14■□□□□ 0.97
COLCA2-204ENST00000610738 LTBP1Q14766 1721 aa21.13■□□□□ 0.97
COLCA2-204ENST00000610738 TRIM28Q13263 835 aaKnown RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms