RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 CCDC12Q8WUD4 166 aaPredicted RBP10.53□□□□□ -0.72
COL25A1-208ENST00000610288 LRP2BPQ9P2M1 347 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 ATP6V1AP38606 617 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 LRCH2Q5VUJ6 765 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 SPINK5Q9NQ38 1064 aaPredicted RBP10.53□□□□□ -0.72
COL25A1-208ENST00000610288 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.53□□□□□ -0.72
COL25A1-208ENST00000610288 MRVI1Q9Y6F6 885 aa10.53□□□□□ -0.72
COL25A1-208ENST00000610288 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.72
COL25A1-208ENST00000610288 MAP2K2P36507 400 aa10.52□□□□□ -0.72
COL25A1-208ENST00000610288 DNM1Q05193 864 aaKnown RBP10.52□□□□□ -0.72
COL25A1-208ENST00000610288 SOGA3Q5TF21 947 aa10.52□□□□□ -0.72
COL25A1-208ENST00000610288 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.52□□□□□ -0.72
COL25A1-208ENST00000610288 PPM1EQ8WY54 764 aa10.52□□□□□ -0.72
COL25A1-208ENST00000610288 SPA17Q15506 151 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 DNAJC25Q9H1X3 360 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 TCOF1Q13428 1488 aaKnown RBP10.52□□□□□ -0.73
COL25A1-208ENST00000610288 BLMP54132 1417 aaPredicted RBP10.52□□□□□ -0.73
COL25A1-208ENST00000610288 STARD3NLO95772 234 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 PAFAH1B1P43034 410 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 AMOTQ4VCS5 1084 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 METTL24Q5JXM2 366 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 PLEKHM2Q8IWE5 1019 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 CNNM3Q8NE01 707 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 TAF4BQ92750 862 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 AIDAQ96BJ3 306 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 DRC1Q96MC2 740 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 LMBRD1Q9NUN5 540 aa10.52□□□□□ -0.73
COL25A1-208ENST00000610288 MRPL50Q8N5N7 158 aaKnown RBP10.52□□□□□ -0.73
COL25A1-208ENST00000610288 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.73
COL25A1-208ENST00000610288 FAM135AQ9P2D6 1515 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 KIF14Q15058 1648 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 BIN1O00499 593 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 IGHMBP2P38935 993 aaKnown RBP10.51□□□□□ -0.73
COL25A1-208ENST00000610288 FLIIQ13045 1269 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 FMNL3Q8IVF7 1028 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 MYD88Q99836 296 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 TUBBP07437 444 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 GRIN2AQ12879 1464 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 GOLGA6L10A0A0M3HER8 536 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 YEATS4O95619 227 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 IBSPP21815 317 aaPredicted RBP10.51□□□□□ -0.73
COL25A1-208ENST00000610288 U2AF2P26368 475 aaKnown RBP eCLIP10.51□□□□□ -0.73
COL25A1-208ENST00000610288 MPRIPQ6WCQ1 1025 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 ZHX3Q9H4I2 956 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 PHF8Q9UPP1 1060 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 AMOTL2Q9Y2J4 779 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
COL25A1-208ENST00000610288 NOS1P29475 1434 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 UBASH3AP57075 661 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 GUCY1B3Q02153 619 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 C14orf93Q9H972 538 aaKnown RBP10.5□□□□□ -0.73
COL25A1-208ENST00000610288 CAPN2P17655 700 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 CCDC8Q9H0W5 538 aaPredicted RBP10.5□□□□□ -0.73
COL25A1-208ENST00000610288 CFAP43Q8NDM7 1665 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 RNF187Q5TA31 235 aaPredicted RBP10.5□□□□□ -0.73
COL25A1-208ENST00000610288 AKAP2Q9Y2D5 859 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 PEG3Q9GZU2 1588 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 USO1O60763 962 aaKnown RBP10.5□□□□□ -0.73
COL25A1-208ENST00000610288 KLHL10Q6JEL2 608 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 BICDL1Q6ZP65 573 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 GOLGA1Q92805 767 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 MEIS3Q99687 375 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 UHRF1BP1Q6BDS2 1440 aa10.5□□□□□ -0.73
COL25A1-208ENST00000610288 IFIT1P09914 478 aaKnown RBP10.49□□□□□ -0.73
COL25A1-208ENST00000610288 MCM6Q14566 821 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 KRBA2Q6ZNG9 492 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 NEK1Q96PY6 1258 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 DBF4Q9UBU7 674 aaPredicted RBP10.49□□□□□ -0.73
COL25A1-208ENST00000610288 HSPA2P54652 639 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 TSHZ3Q63HK5 1081 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 CEP112Q8N8E3 955 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 MRPS27Q92552 414 aaKnown RBP10.49□□□□□ -0.73
COL25A1-208ENST00000610288 COL17A1Q9UMD9 1497 aaPredicted RBP10.49□□□□□ -0.73
COL25A1-208ENST00000610288 LAMC3Q9Y6N6 1575 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 CTAGE15A4D2H0 777 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 CTAGE8P0CG41 777 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 CTAGE6Q86UF2 777 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 CTAGE4Q8IX94 777 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 AOPEPQ8N6M6 819 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 NECAB1Q8N987 351 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 SYCP1Q15431 976 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 TEX2Q8IWB9 1127 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 RHPN1Q8TCX5 695 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 KCNG4Q8TDN1 519 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 TANGO6Q9C0B7 1094 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 ZSWIM4Q9H7M6 989 aa10.49□□□□□ -0.73
COL25A1-208ENST00000610288 PHAXQ9H814 394 aaKnown RBP10.49□□□□□ -0.73
COL25A1-208ENST00000610288 ZNF608Q9ULD9 1512 aaPredicted RBP10.49□□□□□ -0.73
COL25A1-208ENST00000610288 TAX1BP1Q86VP1 789 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 EHBP1Q8NDI1 1231 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 CPLX3Q8WVH0 158 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 NUP88Q99567 741 aaPredicted RBP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 BCL2L12Q9HB09 334 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 SSBP05455 408 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL25A1-208ENST00000610288 SYT1P21579 422 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 KANK3Q6NY19 840 aa10.48□□□□□ -0.73
COL25A1-208ENST00000610288 C16orf71Q8IYS4 520 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms