RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 BBXQ8WY36 941 aaPredicted RBP15□□□□□ -0.01
USP6NL-205ENST00000609104 TSNARE1Q96NA8 513 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
USP6NL-205ENST00000609104 IARSP41252 1262 aaKnown RBP15□□□□□ -0.01
USP6NL-205ENST00000609104 KIAA0753Q2KHM9 967 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 SAMM50Q9Y512 469 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 UBA7P41226 1012 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 TSHZ3Q63HK5 1081 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 HCLS1P14317 486 aaPredicted RBP15□□□□□ -0.01
USP6NL-205ENST00000609104 MICU3Q86XE3 530 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 FBF1Q8TES7 1133 aa15□□□□□ -0.01
USP6NL-205ENST00000609104 METAP2P50579 478 aaKnown RBP eCLIP14.99□□□□□ -0.01
USP6NL-205ENST00000609104 IFI16Q16666 785 aaKnown RBP14.99□□□□□ -0.01
USP6NL-205ENST00000609104 ATAD2Q6PL18 1390 aa14.99□□□□□ -0.01
USP6NL-205ENST00000609104 ANO6Q4KMQ2 910 aa14.99□□□□□ -0.01
USP6NL-205ENST00000609104 HSPA4P34932 840 aa14.99□□□□□ -0.01
USP6NL-205ENST00000609104 EXOC1Q9NV70 894 aa14.99□□□□□ -0.01
USP6NL-205ENST00000609104 MCM5P33992 734 aa14.99□□□□□ -0.01
USP6NL-205ENST00000609104 CKAP4Q07065 602 aaKnown RBP14.99□□□□□ -0.01
USP6NL-205ENST00000609104 MPRIPQ6WCQ1 1025 aa14.99□□□□□ -0.01
USP6NL-205ENST00000609104 PLEKHH2Q8IVE3 1493 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 NEK1Q96PY6 1258 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 CCDC102BQ68D86 513 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 ARFGAP3Q9NP61 516 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 HECW1Q76N89 1606 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 N4BP3O15049 544 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 AFMP43652 599 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 MXRA7P84157 204 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 TBC1D5Q92609 795 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 SYKP43405 635 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 CCDC171Q6TFL3 1326 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 TERF1P54274 439 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 TRIM47Q96LD4 638 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 ORC3Q9UBD5 711 aaPredicted RBP14.98□□□□□ -0.01
USP6NL-205ENST00000609104 CCDC160A6NGH7 325 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 CCDC6Q16204 474 aa14.98□□□□□ -0.01
USP6NL-205ENST00000609104 TRMT112Q9UI30 125 aaKnown RBP14.98□□□□□ -0.01
USP6NL-205ENST00000609104 LRSAM1Q6UWE0 723 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 PRIMPOLQ96LW4 560 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 MAP3K2Q9Y2U5 619 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 KAT14Q9H8E8 782 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 PTGS1P23219 599 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 SELENOOQ9BVL4 669 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 KRT222Q8N1A0 295 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 TSPY2A6NKD2 308 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 STXBP4Q6ZWJ1 553 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 AQRO60306 1485 aaKnown RBP eCLIP14.97□□□□□ -0.013e-7■■■■□ 24.7
USP6NL-205ENST00000609104 KIF5BP33176 963 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 RSPH14Q9UHP6 348 aa14.97□□□□□ -0.01
USP6NL-205ENST00000609104 KIF4AO95239 1232 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 GPTP24298 496 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 TMEM87AQ8NBN3 555 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 APBB1IPQ7Z5R6 666 aaPredicted RBP14.96□□□□□ -0.01
USP6NL-205ENST00000609104 NECAB1Q8N987 351 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 MFSD6Q6ZSS7 791 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
USP6NL-205ENST00000609104 PYM1Q9BRP8 204 aaKnown RBP14.96□□□□□ -0.01
USP6NL-205ENST00000609104 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 WAPLQ7Z5K2 1190 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 PTPRCP08575 1304 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 FERMT1Q9BQL6 677 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 BICD1Q96G01 975 aa14.96□□□□□ -0.01
USP6NL-205ENST00000609104 EHBP1Q8NDI1 1231 aa14.96□□□□□ -0.02
USP6NL-205ENST00000609104 TTLL12Q14166 644 aaPredicted RBP14.96□□□□□ -0.02
USP6NL-205ENST00000609104 TTC21AQ8NDW8 1320 aa14.96□□□□□ -0.02
USP6NL-205ENST00000609104 FEZ1Q99689 392 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 ZSCAN16Q9H4T2 348 aaPredicted RBP14.95□□□□□ -0.02
USP6NL-205ENST00000609104 DNAI1Q9UI46 699 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 ACTN2P35609 894 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 KCNH5Q8NCM2 988 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 TRIM27P14373 513 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 STAT6P42226 847 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 RGS22Q8NE09 1264 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.95□□□□□ -0.02
USP6NL-205ENST00000609104 SLF2Q8IX21 1173 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 DAAM2Q86T65 1068 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 CNPY2Q9Y2B0 182 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 ATRIPQ8WXE1 791 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 SYNCQ9H7C4 482 aa14.95□□□□□ -0.02
USP6NL-205ENST00000609104 TMEM110-MUSTN1A8MSY1 372 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 SLC52A1Q9NWF4 448 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 CCDC61Q9Y6R9 512 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 SNRKQ9NRH2 765 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 CTAGE9A4FU28 777 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 ZSCAN22P10073 491 aaPredicted RBP14.94□□□□□ -0.02
USP6NL-205ENST00000609104 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 NCOA7Q8NI08 942 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 SREK1Q8WXA9 508 aaKnown RBP14.94□□□□□ -0.02
USP6NL-205ENST00000609104 CYLC1P35663 651 aaPredicted RBP14.94□□□□□ -0.02
USP6NL-205ENST00000609104 NOLC1Q14978 699 aaKnown RBP eCLIP14.94□□□□□ -0.02
USP6NL-205ENST00000609104 AKR1B10O60218 316 aa14.94□□□□□ -0.02
USP6NL-205ENST00000609104 NSRP1Q9H0G5 558 aaKnown RBP14.94□□□□□ -0.02
USP6NL-205ENST00000609104 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
USP6NL-205ENST00000609104 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
USP6NL-205ENST00000609104 TTF1Q15361 905 aaPredicted RBP14.93□□□□□ -0.02
USP6NL-205ENST00000609104 USP48Q86UV5 1035 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 PDE4BQ07343 736 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 MSL1Q68DK7 614 aa14.93□□□□□ -0.02
USP6NL-205ENST00000609104 CFAP57Q96MR6 1250 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms