RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 LTBP3Q9NS15 1303 aa18.59■□□□□ 0.57
PKNOX1-210ENST00000607049 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
PKNOX1-210ENST00000607049 NTSR2O95665 410 aa18.59■□□□□ 0.57
PKNOX1-210ENST00000607049 CRY2Q49AN0 593 aa18.59■□□□□ 0.57
PKNOX1-210ENST00000607049 RIC1Q4ADV7 1423 aa18.58■□□□□ 0.57
PKNOX1-210ENST00000607049 IL16Q14005 1332 aa18.58■□□□□ 0.57
PKNOX1-210ENST00000607049 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.56
PKNOX1-210ENST00000607049 GRIPAP1Q4V328 841 aa18.58■□□□□ 0.56
PKNOX1-210ENST00000607049 CC2D2BQ6DHV5 1058 aa18.58■□□□□ 0.56
PKNOX1-210ENST00000607049 TRMT112Q9UI30 125 aaKnown RBP18.58■□□□□ 0.56
PKNOX1-210ENST00000607049 ABCC12Q96J65 1359 aa18.57■□□□□ 0.56
PKNOX1-210ENST00000607049 RIC3Q7Z5B4 369 aa18.57■□□□□ 0.56
PKNOX1-210ENST00000607049 NLRP10Q86W26 655 aa18.57■□□□□ 0.56
PKNOX1-210ENST00000607049 FAM9BQ8IZU0 186 aa18.57■□□□□ 0.56
PKNOX1-210ENST00000607049 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
PKNOX1-210ENST00000607049 NUP98P52948 1817 aa18.57■□□□□ 0.56
PKNOX1-210ENST00000607049 SH3TC1Q8TE82 1336 aa18.56■□□□□ 0.56
PKNOX1-210ENST00000607049 KIF3CO14782 793 aa18.56■□□□□ 0.56
PKNOX1-210ENST00000607049 TOMM70O94826 608 aa18.56■□□□□ 0.56
PKNOX1-210ENST00000607049 HOXA10P31260 410 aaPredicted RBP18.56■□□□□ 0.56
PKNOX1-210ENST00000607049 SLC10A5Q5PT55 438 aa18.56■□□□□ 0.56
PKNOX1-210ENST00000607049 COL11A2P13942 1736 aaPredicted RBP18.56■□□□□ 0.56
PKNOX1-210ENST00000607049 GLTPD2A6NH11 291 aa18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 FKBP4Q02790 459 aaKnown RBP eCLIP18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 WDR63Q8IWG1 891 aa18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 C7orf43Q8WVR3 580 aa18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 NMRK2Q9NPI5 230 aa18.55■□□□□ 0.56
PKNOX1-210ENST00000607049 TSR2Q969E8 191 aaKnown RBP18.54■□□□□ 0.56
PKNOX1-210ENST00000607049 SALL2Q9Y467 1007 aaPredicted RBP18.54■□□□□ 0.56
PKNOX1-210ENST00000607049 RRAGCQ9HB90 399 aa18.53■□□□□ 0.56
PKNOX1-210ENST00000607049 PPEF1O14829 653 aaPredicted RBP18.52■□□□□ 0.56
PKNOX1-210ENST00000607049 VEGFAP15692 232 aaPredicted RBP18.52■□□□□ 0.56
PKNOX1-210ENST00000607049 TWISTNBQ3B726 338 aaPredicted RBP18.52■□□□□ 0.56
PKNOX1-210ENST00000607049 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.56
PKNOX1-210ENST00000607049 TRIM28Q13263 835 aaKnown RBP18.51■□□□□ 0.55
PKNOX1-210ENST00000607049 ISCA1Q9BUE6 129 aa18.51■□□□□ 0.55
PKNOX1-210ENST00000607049 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
PKNOX1-210ENST00000607049 ATP5J2-PTCD1G3V325 749 aa18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 BBOX1O75936 387 aa18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 HCLS1P14317 486 aaPredicted RBP18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 PRELPP51888 382 aa18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 RBM46Q8TBY0 533 aaKnown RBP18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 JDP2Q8WYK2 163 aa18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 PSMD1Q99460 953 aa18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 PHAXQ9H814 394 aaKnown RBP18.5■□□□□ 0.55
PKNOX1-210ENST00000607049 HSPA6P17066 643 aa18.49■□□□□ 0.55
PKNOX1-210ENST00000607049 NEXNQ0ZGT2 675 aa18.49■□□□□ 0.55
PKNOX1-210ENST00000607049 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
PKNOX1-210ENST00000607049 TSPYL6Q8N831 410 aa18.49■□□□□ 0.55
PKNOX1-210ENST00000607049 ZNF277Q9NRM2 450 aaPredicted RBP18.49■□□□□ 0.55
PKNOX1-210ENST00000607049 SBF1O95248 1867 aa18.49■□□□□ 0.55
PKNOX1-210ENST00000607049 ARFGEF2Q9Y6D5 1785 aa18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 FSTL1Q12841 308 aa18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 TMC4Q7Z404 712 aa18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 CCDC191Q8NCU4 936 aa18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 FAM89AQ96GI7 184 aa18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 MYD88Q99836 296 aa18.48■□□□□ 0.55
PKNOX1-210ENST00000607049 OLFM4Q6UX06 510 aa18.47■□□□□ 0.55
PKNOX1-210ENST00000607049 C3orf67Q6ZVT6 689 aa18.47■□□□□ 0.55
PKNOX1-210ENST00000607049 SUPT20HQ8NEM7 779 aa18.47■□□□□ 0.55
PKNOX1-210ENST00000607049 ATP6V0A2Q9Y487 856 aa18.47■□□□□ 0.55
PKNOX1-210ENST00000607049 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
PKNOX1-210ENST00000607049 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 KSR2Q6VAB6 950 aa18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 ZBTB38Q8NAP3 1195 aaPredicted RBP18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 SMC1BQ8NDV3 1235 aa18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 METTL22Q9BUU2 404 aaPredicted RBP18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 CWC25Q9NXE8 425 aaPredicted RBP18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 TNRC6CQ9HCJ0 1690 aaKnown RBP18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 ABCC4O15439 1325 aa18.46■□□□□ 0.55
PKNOX1-210ENST00000607049 IQCA1LA6NCM1 817 aa18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 IRS4O14654 1257 aaPredicted RBP18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 GRAPQ13588 217 aa18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 RTL5Q5HYW3 569 aaPredicted RBP18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 GRAPLQ8TC17 118 aaPredicted RBP18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 VPS33BQ9H267 617 aa18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 MAP3K2Q9Y2U5 619 aa18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 CACNA1SQ13698 1873 aa18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 ANKRD36CQ5JPF3 1778 aa18.45■□□□□ 0.54
PKNOX1-210ENST00000607049 PI4KAP2A4QPH2 592 aa18.44■□□□□ 0.54
PKNOX1-210ENST00000607049 APLP1P51693 650 aa18.44■□□□□ 0.54
PKNOX1-210ENST00000607049 EIF6P56537 245 aaKnown RBP18.44■□□□□ 0.54
PKNOX1-210ENST00000607049 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
PKNOX1-210ENST00000607049 LARGE2Q8N3Y3 721 aa18.44■□□□□ 0.54
PKNOX1-210ENST00000607049 PI4KAP1Q8N8J0 262 aa18.44■□□□□ 0.54
PKNOX1-210ENST00000607049 DDNO94850 711 aaPredicted RBP18.43■□□□□ 0.54
PKNOX1-210ENST00000607049 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
PKNOX1-210ENST00000607049 DPP8Q6V1X1 898 aaPredicted RBP18.43■□□□□ 0.54
PKNOX1-210ENST00000607049 ZNF428Q96B54 188 aa18.43■□□□□ 0.54
PKNOX1-210ENST00000607049 TIAM2Q8IVF5 1701 aa18.43■□□□□ 0.54
PKNOX1-210ENST00000607049 PCCAP05165 728 aaPredicted RBP18.42■□□□□ 0.54
PKNOX1-210ENST00000607049 EXOSC9Q06265 439 aaKnown RBP18.42■□□□□ 0.54
PKNOX1-210ENST00000607049 MPNDQ8N594 471 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms