RNA–Protein interactions for RNA: ENST00000606394.5

CTSA-212, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-212ENST00000606394 SCNN1DP51172 638 aa17.83■□□□□ 0.44
CTSA-212ENST00000606394 NBPF10Q6P3W6 841 aaKnown RBP17.83■□□□□ 0.44
CTSA-212ENST00000606394 NBPF15Q8N660 670 aa17.83■□□□□ 0.44
CTSA-212ENST00000606394 PHACTR3Q96KR7 559 aa17.83■□□□□ 0.44
CTSA-212ENST00000606394 GJA3Q9Y6H8 435 aa17.83■□□□□ 0.44
CTSA-212ENST00000606394 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
CTSA-212ENST00000606394 TRPM7Q96QT4 1865 aa17.82■□□□□ 0.44
CTSA-212ENST00000606394 CCDC85CA6NKD9 419 aa17.82■□□□□ 0.44
CTSA-212ENST00000606394 PRKAR2BP31323 418 aa17.82■□□□□ 0.44
CTSA-212ENST00000606394 RTF1Q92541 710 aaKnown RBP17.82■□□□□ 0.44
CTSA-212ENST00000606394 RSPH6AQ9H0K4 717 aa17.82■□□□□ 0.44
CTSA-212ENST00000606394 TLL2Q9Y6L7 1015 aa17.82■□□□□ 0.44
CTSA-212ENST00000606394 LTBP1Q14766 1721 aa17.81■□□□□ 0.44
CTSA-212ENST00000606394 ERVV-1B6SEH8 477 aa17.81■□□□□ 0.44
CTSA-212ENST00000606394 CST9Q5W186 159 aa17.81■□□□□ 0.44
CTSA-212ENST00000606394 CYP4F22Q6NT55 531 aa17.81■□□□□ 0.44
CTSA-212ENST00000606394 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
CTSA-212ENST00000606394 LARGE2Q8N3Y3 721 aa17.81■□□□□ 0.44
CTSA-212ENST00000606394 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
CTSA-212ENST00000606394 FAM177BA6PVY3 158 aa17.8■□□□□ 0.44
CTSA-212ENST00000606394 HTATSF1O43719 755 aaKnown RBP17.8■□□□□ 0.44
CTSA-212ENST00000606394 EPS15P42566 896 aa17.8■□□□□ 0.44
CTSA-212ENST00000606394 HLFQ16534 295 aa17.8■□□□□ 0.44
CTSA-212ENST00000606394 RPGRQ92834 1020 aaKnown RBP17.8■□□□□ 0.44
CTSA-212ENST00000606394 HHIPL1Q96JK4 782 aa17.8■□□□□ 0.44
CTSA-212ENST00000606394 VPS33BQ9H267 617 aa17.8■□□□□ 0.44
CTSA-212ENST00000606394 COL4A5P29400 1685 aa17.8■□□□□ 0.44
CTSA-212ENST00000606394 CRAMP1Q96RY5 1269 aa17.79■□□□□ 0.44
CTSA-212ENST00000606394 ABCC12Q96J65 1359 aa17.79■□□□□ 0.44
CTSA-212ENST00000606394 NIM1KQ8IY84 436 aa17.78■□□□□ 0.44
CTSA-212ENST00000606394 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
CTSA-212ENST00000606394 ADARB2Q9NS39 739 aaKnown RBP17.78■□□□□ 0.44
CTSA-212ENST00000606394 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
CTSA-212ENST00000606394 BRPF1P55201 1214 aaPredicted RBP17.77■□□□□ 0.44
CTSA-212ENST00000606394 MCM10Q7L590 875 aa17.77■□□□□ 0.44
CTSA-212ENST00000606394 SAPCD2Q86UD0 394 aa17.77■□□□□ 0.44
CTSA-212ENST00000606394 PDE4DIPQ5VU43 2346 aa17.77■□□□□ 0.43
CTSA-212ENST00000606394 TNRC18O15417 2968 aaPredicted RBP17.76■□□□□ 0.43
CTSA-212ENST00000606394 TRAF5O00463 557 aa17.76■□□□□ 0.43
CTSA-212ENST00000606394 FMR1Q06787 632 aaKnown RBP eCLIP17.76■□□□□ 0.43
CTSA-212ENST00000606394 GRM1Q13255 1194 aa17.76■□□□□ 0.43
CTSA-212ENST00000606394 TAF7Q15545 349 aaPredicted RBP17.76■□□□□ 0.43
CTSA-212ENST00000606394 NUTM1Q86Y26 1132 aa17.76■□□□□ 0.43
CTSA-212ENST00000606394 RBM17Q96I25 401 aaKnown RBP17.76■□□□□ 0.43
CTSA-212ENST00000606394 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
CTSA-212ENST00000606394 GPRC5DQ9NZD1 345 aa17.76■□□□□ 0.43
CTSA-212ENST00000606394 LAMB4A4D0S4 1761 aa17.76■□□□□ 0.43
CTSA-212ENST00000606394 MAP3K15Q6ZN16 1313 aa17.75■□□□□ 0.43
CTSA-212ENST00000606394 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
CTSA-212ENST00000606394 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
CTSA-212ENST00000606394 NUP98P52948 1817 aa17.75■□□□□ 0.43
CTSA-212ENST00000606394 AOC2O75106 756 aa17.74■□□□□ 0.43
CTSA-212ENST00000606394 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
CTSA-212ENST00000606394 ZC3H15Q8WU90 426 aaKnown RBP17.74■□□□□ 0.43
CTSA-212ENST00000606394 MCOLN1Q9GZU1 580 aa17.74■□□□□ 0.43
CTSA-212ENST00000606394 PGAP2Q9UHJ9 254 aa17.74■□□□□ 0.43
CTSA-212ENST00000606394 PPIP5K2O43314 1243 aa17.73■□□□□ 0.43
CTSA-212ENST00000606394 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
CTSA-212ENST00000606394 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
CTSA-212ENST00000606394 ZNRF3Q9ULT6 936 aa17.73■□□□□ 0.43
CTSA-212ENST00000606394 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
CTSA-212ENST00000606394 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
CTSA-212ENST00000606394 UBN2Q6ZU65 1347 aa17.72■□□□□ 0.43
CTSA-212ENST00000606394 U2AF1L5P0DN76 240 aaPredicted RBP17.71■□□□□ 0.43
CTSA-212ENST00000606394 U2AF1Q01081 240 aaKnown RBP eCLIP17.71■□□□□ 0.43
CTSA-212ENST00000606394 RTFDC1Q9BY42 306 aaPredicted RBP17.71■□□□□ 0.43
CTSA-212ENST00000606394 ATP6V0A2Q9Y487 856 aa17.71■□□□□ 0.43
CTSA-212ENST00000606394 CXCL9Q07325 125 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 NOGQ13253 232 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 DCTN1Q14203 1278 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 AOC3Q16853 763 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 SUSD4Q5VX71 490 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 PPP1R42Q7Z4L9 355 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 NLRP3Q96P20 1036 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 CASP8AP2Q9UKL3 1982 aa17.7■□□□□ 0.42
CTSA-212ENST00000606394 NTSR2O95665 410 aa17.69■□□□□ 0.42
CTSA-212ENST00000606394 TNIP1Q15025 636 aa17.69■□□□□ 0.42
CTSA-212ENST00000606394 GIGYF2Q6Y7W6 1299 aaKnown RBP17.69■□□□□ 0.42
CTSA-212ENST00000606394 CDC37L1Q7L3B6 337 aa17.69■□□□□ 0.42
CTSA-212ENST00000606394 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
CTSA-212ENST00000606394 GPTP24298 496 aa17.68■□□□□ 0.42
CTSA-212ENST00000606394 GMPSP49915 693 aaPredicted RBP17.68■□□□□ 0.42
CTSA-212ENST00000606394 SLC10A5Q5PT55 438 aa17.68■□□□□ 0.42
CTSA-212ENST00000606394 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
CTSA-212ENST00000606394 CFAP44Q96MT7 982 aa17.68■□□□□ 0.42
CTSA-212ENST00000606394 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
CTSA-212ENST00000606394 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
CTSA-212ENST00000606394 TCERG1O14776 1098 aaKnown RBP17.67■□□□□ 0.42
CTSA-212ENST00000606394 BBOX1O75936 387 aa17.67■□□□□ 0.42
CTSA-212ENST00000606394 DGKZQ13574 1117 aa17.67■□□□□ 0.42
CTSA-212ENST00000606394 CIAPIN1Q6FI81 312 aa17.67■□□□□ 0.42
CTSA-212ENST00000606394 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
CTSA-212ENST00000606394 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
CTSA-212ENST00000606394 KIAA2012Q0VF49 1180 aa17.66■□□□□ 0.42
CTSA-212ENST00000606394 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
CTSA-212ENST00000606394 SP8Q8IXZ3 490 aa17.66■□□□□ 0.42
CTSA-212ENST00000606394 BCL2L13Q9BXK5 485 aa17.66■□□□□ 0.42
CTSA-212ENST00000606394 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms