RNA–Protein interactions for RNA: ENST00000606377.6

PAX6-231, Transcript of paired box 6, human

APPRIS P4 TSL 5 BASIC

Gene PAX6, Length 6,901 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-231	ENST00000606377	CPLX3	Q8WVH0	158 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	CALML4	Q96GE6	196 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	NPHP3	Q7Z494	1330 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	SFPQ	P23246	707 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	CCDC150	Q8NCX0	1101 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	ITSN2	Q9NZM3	1697 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	NUP88	Q99567	741 aa	Predicted RBP	11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	SAMM50	Q9Y512	469 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	BIVM-ERCC5	R4GMW8	1640 aa		11.53	□□□□□ -0.56
PAX6-231	ENST00000606377	SYCP2	Q9BX26	1530 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	BIN1	O00499	593 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	IL27	Q8NEV9	243 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	RHPN1	Q8TCX5	695 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	MEIS3	Q99687	375 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	CYP7A1	P22680	504 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	TBC1D2	Q9BYX2	928 aa		11.52	□□□□□ -0.56
PAX6-231	ENST00000606377	ORC3	Q9UBD5	711 aa	Predicted RBP	11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	TOM1	O60784	492 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	PRKCSH	P14314	528 aa	Predicted RBP	11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	DNA2	P51530	1060 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	TMX1	Q9H3N1	280 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	TCP11L1	Q9NUJ3	509 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	CASQ1	P31415	396 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	AKAP4	Q5JQC9	854 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	ISM2	Q6H9L7	571 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	NIP7	Q9Y221	180 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	A2M	P01023	1474 aa		11.52	□□□□□ -0.57
PAX6-231	ENST00000606377	TSPY3	P0CV98	308 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	TSPY8	P0CW00	308 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	CETN2	P41208	172 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	TNPO1	Q92973	898 aa	Known RBP	11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	ASXL1	Q8IXJ9	1541 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	STX6	O43752	255 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	CCDC102A	Q96A19	550 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	CLIP2	Q9UDT6	1046 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	SLC4A4	Q9Y6R1	1079 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	TEX14	Q8IWB6	1497 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	STX8	Q9UNK0	236 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	PLCH2	O75038	1416 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	EIF4A2	Q14240	407 aa	Known RBP	11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	DDB1	Q16531	1140 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	CTAGE5	O15320	804 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	PICALM	Q13492	652 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	CCDC178	Q5BJE1	867 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	BMP2KL	Q5H9B9	411 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	VPS36	Q86VN1	386 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	RALGAPB	Q86X10	1494 aa		11.51	□□□□□ -0.57
PAX6-231	ENST00000606377	HMG20B	Q9P0W2	317 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	IDE	P14735	1019 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	MCM5	P33992	734 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	MTIF2	P46199	727 aa	Known RBP	11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	TDRD12	Q587J7	1177 aa	Known RBP	11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	LRRC2	Q9BYS8	371 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	ATP10B	O94823	1461 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	ZSCAN12	O43309	604 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	KIF5C	O60282	957 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	KIAA0754	O94854	1291 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	AMPD3	Q01432	767 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	WTAP	Q15007	396 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	ATP2B3	Q16720	1220 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	C8orf58	Q8NAV2	365 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	SIRT1	Q96EB6	747 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	GRM8	O00222	908 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	KIF20A	O95235	890 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	TNNT1	P13805	278 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	DHX37	Q8IY37	1157 aa	Known RBP	11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	UTP14A	Q9BVJ6	771 aa	Known RBP	11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	LMBR1L	Q6UX01	489 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	NLRP3	Q96P20	1036 aa		11.5	□□□□□ -0.57
PAX6-231	ENST00000606377	NUCB1	Q02818	461 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	PTPN14	Q15678	1187 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	IFIT1B	Q5T764	474 aa	Known RBP	11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	NFATC2IP	Q8NCF5	419 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	TCERG1L	Q5VWI1	586 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	SYCP3	Q8IZU3	236 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	WWC3	Q9ULE0	1092 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	KLF18	A0A0U1RQI7	1052 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	MTHFSD	Q2M296	383 aa	Known RBP	11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	NECAB1	Q8N987	351 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	NCKAP5L	Q9HCH0	1330 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	CCDC66	A2RUB6	948 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	ANAPC15	P60006	121 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	CCDC40	Q4G0X9	1142 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	IL2RB	P14784	551 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	SDS	P20132	328 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	USP8	P40818	1118 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	DZIP3	Q86Y13	1208 aa	Known RBP	11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	UBXN4	Q92575	508 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	KRT23	Q9C075	422 aa		11.49	□□□□□ -0.57
PAX6-231	ENST00000606377	KSR2	Q6VAB6	950 aa		11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	MRPL50	Q8N5N7	158 aa	Known RBP	11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	UBA7	P41226	1012 aa		11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	ESPN	B1AK53	854 aa		11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	ZGPAT	Q8N5A5	531 aa	Known RBP	11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	SMARCC1	Q92922	1105 aa	Predicted RBP	11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	YEATS4	O95619	227 aa		11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	KIF4B	Q2VIQ3	1234 aa		11.48	□□□□□ -0.57
PAX6-231	ENST00000606377	NAA16	Q6N069	864 aa	Predicted RBP	11.48	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 324.4 ms