RNA–Protein interactions for RNA: ENST00000606173.1

AL390728.4-202, humanhuman

TSL 3 BASIC

Gene AL390728.4, Length 430 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.4-202ENST00000606173 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
AL390728.4-202ENST00000606173 NFKBIEO00221 500 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 TOMM70O94826 608 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 DDX58O95786 925 aaKnown RBP15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 ERFEQ4G0M1 354 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 SLC10A5Q5PT55 438 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
AL390728.4-202ENST00000606173 SH3TC1Q8TE82 1336 aa15.45■□□□□ 0.06
AL390728.4-202ENST00000606173 GLTPD2A6NH11 291 aa15.45■□□□□ 0.06
AL390728.4-202ENST00000606173 RASSF7Q02833 373 aa15.45■□□□□ 0.06
AL390728.4-202ENST00000606173 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
AL390728.4-202ENST00000606173 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
AL390728.4-202ENST00000606173 SENP3-EIF4A1A0A087X0R7 540 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 KIF3CO14782 793 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 ANXA1P04083 346 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 FKBP4Q02790 459 aaKnown RBP eCLIP15.44■□□□□ 0.062e-6■□□□□ 8.5
AL390728.4-202ENST00000606173 NLRP10Q86W26 655 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 WDR63Q8IWG1 891 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 C7orf43Q8WVR3 580 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 STK31Q9BXU1 1019 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 ABCC12Q96J65 1359 aa15.44■□□□□ 0.06
AL390728.4-202ENST00000606173 TRIM28Q13263 835 aaKnown RBP15.43■□□□□ 0.06
AL390728.4-202ENST00000606173 CCDC184Q52MB2 194 aa15.43■□□□□ 0.06
AL390728.4-202ENST00000606173 TMC4Q7Z404 712 aa15.43■□□□□ 0.06
AL390728.4-202ENST00000606173 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
AL390728.4-202ENST00000606173 TRMT112Q9UI30 125 aaKnown RBP15.43■□□□□ 0.06
AL390728.4-202ENST00000606173 TNRC6CQ9HCJ0 1690 aaKnown RBP15.42■□□□□ 0.06
AL390728.4-202ENST00000606173 VEGFAP15692 232 aaPredicted RBP15.42■□□□□ 0.06
AL390728.4-202ENST00000606173 RIC3Q7Z5B4 369 aa15.42■□□□□ 0.06
AL390728.4-202ENST00000606173 RBM46Q8TBY0 533 aaKnown RBP15.42■□□□□ 0.06
AL390728.4-202ENST00000606173 PSMD1Q99460 953 aa15.42■□□□□ 0.06
AL390728.4-202ENST00000606173 SBF1O95248 1867 aa15.42■□□□□ 0.06
AL390728.4-202ENST00000606173 BBOX1O75936 387 aa15.41■□□□□ 0.06
AL390728.4-202ENST00000606173 FSTL1Q12841 308 aa15.41■□□□□ 0.06
AL390728.4-202ENST00000606173 VPS33BQ9H267 617 aa15.41■□□□□ 0.06
AL390728.4-202ENST00000606173 FER1L6Q2WGJ9 1857 aa15.41■□□□□ 0.06
AL390728.4-202ENST00000606173 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
AL390728.4-202ENST00000606173 PPEF1O14829 653 aaPredicted RBP15.4■□□□□ 0.06
AL390728.4-202ENST00000606173 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
AL390728.4-202ENST00000606173 ISCA1Q9BUE6 129 aa15.4■□□□□ 0.06
AL390728.4-202ENST00000606173 MYH16Q9H6N6 1097 aa15.4■□□□□ 0.06
AL390728.4-202ENST00000606173 NMRK2Q9NPI5 230 aa15.4■□□□□ 0.06
AL390728.4-202ENST00000606173 SLX4Q8IY92 1834 aa15.4■□□□□ 0.06
AL390728.4-202ENST00000606173 IQCA1LA6NCM1 817 aa15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 ELL2O00472 640 aaPredicted RBP15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 HSPA6P17066 643 aa15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 TWISTNBQ3B726 338 aaPredicted RBP15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 C8orf58Q8NAV2 365 aa15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 SUPT20HQ8NEM7 779 aa15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 TIAM2Q8IVF5 1701 aa15.39■□□□□ 0.05
AL390728.4-202ENST00000606173 NEXNQ0ZGT2 675 aa15.38■□□□□ 0.05
AL390728.4-202ENST00000606173 CCDC191Q8NCU4 936 aa15.38■□□□□ 0.05
AL390728.4-202ENST00000606173 SMC1BQ8NDV3 1235 aa15.38■□□□□ 0.05
AL390728.4-202ENST00000606173 IARSP41252 1262 aaKnown RBP15.37■□□□□ 0.05
AL390728.4-202ENST00000606173 APLP1P51693 650 aa15.37■□□□□ 0.05
AL390728.4-202ENST00000606173 FAM9BQ8IZU0 186 aa15.37■□□□□ 0.05
AL390728.4-202ENST00000606173 TSR2Q969E8 191 aaKnown RBP15.37■□□□□ 0.05
AL390728.4-202ENST00000606173 RRAGCQ9HB90 399 aa15.37■□□□□ 0.05
AL390728.4-202ENST00000606173 ATP6V0A2Q9Y487 856 aa15.37■□□□□ 0.05
AL390728.4-202ENST00000606173 PRELPP51888 382 aa15.36■□□□□ 0.05
AL390728.4-202ENST00000606173 GRAPQ13588 217 aa15.36■□□□□ 0.05
AL390728.4-202ENST00000606173 SYNE4Q8N205 404 aa15.36■□□□□ 0.05
AL390728.4-202ENST00000606173 ZBTB38Q8NAP3 1195 aaPredicted RBP15.36■□□□□ 0.05
AL390728.4-202ENST00000606173 GRAPLQ8TC17 118 aaPredicted RBP15.36■□□□□ 0.05
AL390728.4-202ENST00000606173 DICER1Q9UPY3 1922 aaKnown RBP15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 SF3B3Q15393 1217 aaKnown RBP15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 KSR2Q6VAB6 950 aa15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 METTL22Q9BUU2 404 aaPredicted RBP15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 ZNF277Q9NRM2 450 aaPredicted RBP15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 CWC25Q9NXE8 425 aaPredicted RBP15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 ABCC4O15439 1325 aa15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 FANCIQ9NVI1 1328 aa15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 CACNA1SQ13698 1873 aa15.35■□□□□ 0.05
AL390728.4-202ENST00000606173 ATP5J2-PTCD1G3V325 749 aa15.34■□□□□ 0.05
AL390728.4-202ENST00000606173 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
AL390728.4-202ENST00000606173 TSPYL6Q8N831 410 aa15.34■□□□□ 0.05
AL390728.4-202ENST00000606173 L3MBTL3Q96JM7 780 aaPredicted RBP15.34■□□□□ 0.05
AL390728.4-202ENST00000606173 PHAXQ9H814 394 aaKnown RBP15.34■□□□□ 0.05
AL390728.4-202ENST00000606173 WDR90Q96KV7 1748 aa15.34■□□□□ 0.05
AL390728.4-202ENST00000606173 IRS4O14654 1257 aaPredicted RBP15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 EIF6P56537 245 aaKnown RBP15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 GPC2Q8N158 579 aa15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 MYD88Q99836 296 aa15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 SNED1Q8TER0 1413 aa15.33■□□□□ 0.04
AL390728.4-202ENST00000606173 FZD9O00144 591 aa15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 CCDC152Q4G0S7 254 aa15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 C3orf67Q6ZVT6 689 aa15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 LARGE2Q8N3Y3 721 aa15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 RTFDC1Q9BY42 306 aaPredicted RBP15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 MAP3K2Q9Y2U5 619 aa15.32■□□□□ 0.04
AL390728.4-202ENST00000606173 PI4KAP2A4QPH2 592 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms