RNA–Protein interactions for RNA: ENST00000602998.1

SH3YL1-227, Transcript of SH3 and SYLF domain containing 1, humanhuman

Gene SH3YL1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-227ENST00000602998 RTKN2Q8IZC4 609 aa13.2□□□□□ -0.3
SH3YL1-227ENST00000602998 PRDM10Q9NQV6 1147 aa13.2□□□□□ -0.3
SH3YL1-227ENST00000602998 TCERG1O14776 1098 aaKnown RBP13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 CTCFP49711 727 aaPredicted RBP13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 POTEHQ6S545 545 aa13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 RTF1Q92541 710 aaKnown RBP13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
SH3YL1-227ENST00000602998 UBN2Q6ZU65 1347 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 KDM3BQ7LBC6 1761 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 HSPA8P11142 646 aaKnown RBP13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 GPTP24298 496 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 EPS15P42566 896 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 CRY2Q49AN0 593 aa13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 RRP7AQ9Y3A4 280 aaKnown RBP13.18□□□□□ -0.3
SH3YL1-227ENST00000602998 TRAF5O00463 557 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 GTF2E1P29083 439 aaPredicted RBP13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 ALDH1B1P30837 517 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 SCNN1DP51172 638 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 SUSD4Q5VX71 490 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 GPC2Q8N158 579 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 CFAP53Q96M91 514 aa13.17□□□□□ -0.3
SH3YL1-227ENST00000602998 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 PSMD1Q99460 953 aa13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 ZBTB3Q9H5J0 574 aa13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 NUDCQ9Y266 331 aa13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
SH3YL1-227ENST00000602998 MAP3K15Q6ZN16 1313 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 TAF1P21675 1872 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 RGL2O15211 777 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 MYL6BP14649 208 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 EIF4A1P60842 406 aaKnown RBP13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 GRM1Q13255 1194 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 CST9Q5W186 159 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 PNMA8AQ86V59 439 aaPredicted RBP13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 JDP2Q8WYK2 163 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
SH3YL1-227ENST00000602998 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
SH3YL1-227ENST00000602998 HTATSF1O43719 755 aaKnown RBP13.14□□□□□ -0.31
SH3YL1-227ENST00000602998 HOXA10P31260 410 aaPredicted RBP13.14□□□□□ -0.31
SH3YL1-227ENST00000602998 CYP4F22Q6NT55 531 aa13.14□□□□□ -0.31
SH3YL1-227ENST00000602998 ABHD8Q96I13 439 aa13.14□□□□□ -0.31
SH3YL1-227ENST00000602998 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 NTSR2O95665 410 aa13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 ANXA1P04083 346 aa13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 EIF6P56537 245 aaKnown RBP13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 ZNF34Q8IZ26 560 aa13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 LARGE2Q8N3Y3 721 aa13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 CAPNS2Q96L46 248 aa13.13□□□□□ -0.31
SH3YL1-227ENST00000602998 AOC2O75106 756 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 AOC3Q16853 763 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 PROSER3Q2NL68 480 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 PAXIP1Q6ZW49 1069 aaPredicted RBP13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 RPGRQ92834 1020 aaKnown RBP13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 NYXQ9GZU5 481 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 LAMB2P55268 1798 aa13.12□□□□□ -0.31
SH3YL1-227ENST00000602998 THSD7BQ9C0I4 1608 aa13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 LRP10Q7Z4F1 713 aa13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 CRAMP1Q96RY5 1269 aa13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
SH3YL1-227ENST00000602998 PPIP5K2O43314 1243 aa13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 LMOD1P29536 600 aaPredicted RBP13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 CXCL9Q07325 125 aa13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 PDIA6Q15084 440 aa13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 CC2D2BQ6DHV5 1058 aa13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 KIF6Q6ZMV9 814 aa13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 RBM17Q96I25 401 aaKnown RBP13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 GPR101Q96P66 508 aaPredicted RBP13.1□□□□□ -0.31
SH3YL1-227ENST00000602998 ABCB7O75027 752 aa13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 HIRAP54198 1017 aaPredicted RBP13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 MAP2K1Q02750 393 aaPredicted RBP13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 GIGYF2Q6Y7W6 1299 aaKnown RBP13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 GLIS2Q9BZE0 524 aaPredicted RBP13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 ABCC4O15439 1325 aa13.09□□□□□ -0.31
SH3YL1-227ENST00000602998 IBTKQ9P2D0 1353 aaPredicted RBP13.08□□□□□ -0.31
SH3YL1-227ENST00000602998 EIF2S2P20042 333 aaKnown RBP13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 NFE2L2Q16236 605 aa13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 USP50Q70EL3 339 aaPredicted RBP13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 ZIC5Q96T25 663 aa13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 GPRC5DQ9NZD1 345 aa13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 ATP6V0A2Q9Y487 856 aa13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
SH3YL1-227ENST00000602998 TNRC18O15417 2968 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms