RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 PDGFAP04085 211 aa12.77□□□□□ -0.37
SGMS1-206ENST00000602565 FAM157BP0CG42 384 aa12.77□□□□□ -0.37
SGMS1-206ENST00000602565 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
SGMS1-206ENST00000602565 GTPBP3Q969Y2 492 aaKnown RBP12.77□□□□□ -0.37
SGMS1-206ENST00000602565 NUDT16Q96DE0 195 aaKnown RBP12.77□□□□□ -0.37
SGMS1-206ENST00000602565 OPLAHO14841 1288 aa12.76□□□□□ -0.37
SGMS1-206ENST00000602565 RPLP1P05386 114 aaKnown RBP12.76□□□□□ -0.37
SGMS1-206ENST00000602565 THBS1P07996 1170 aa12.76□□□□□ -0.37
SGMS1-206ENST00000602565 ZNF787Q6DD87 383 aa12.76□□□□□ -0.37
SGMS1-206ENST00000602565 CMTR1Q8N1G2 835 aaKnown RBP12.76□□□□□ -0.37
SGMS1-206ENST00000602565 TRERF1Q96PN7 1200 aa12.76□□□□□ -0.37
SGMS1-206ENST00000602565 CITED4Q96RK1 184 aa12.76□□□□□ -0.37
SGMS1-206ENST00000602565 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
SGMS1-206ENST00000602565 PDE3BQ13370 1112 aa12.75□□□□□ -0.37
SGMS1-206ENST00000602565 PHF24Q9UPV7 400 aa12.75□□□□□ -0.37
SGMS1-206ENST00000602565 USP20Q9Y2K6 914 aa12.75□□□□□ -0.37
SGMS1-206ENST00000602565 C8orf34Q49A92 452 aa12.74□□□□□ -0.37
SGMS1-206ENST00000602565 SV2AQ7L0J3 742 aa12.74□□□□□ -0.37
SGMS1-206ENST00000602565 RBCK1Q9BYM8 510 aa12.74□□□□□ -0.37
SGMS1-206ENST00000602565 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
SGMS1-206ENST00000602565 VWA5B2Q8N398 1253 aa12.73□□□□□ -0.37
SGMS1-206ENST00000602565 ABHD17AQ96GS6 310 aa12.73□□□□□ -0.37
SGMS1-206ENST00000602565 ASB16Q96NS5 453 aa12.73□□□□□ -0.37
SGMS1-206ENST00000602565 KCNH4Q9UQ05 1017 aa12.73□□□□□ -0.37
SGMS1-206ENST00000602565 FNDC3AQ9Y2H6 1198 aaKnown RBP12.73□□□□□ -0.37
SGMS1-206ENST00000602565 MAPTP10636 758 aaKnown RBP12.72□□□□□ -0.37
SGMS1-206ENST00000602565 ERCC3P19447 782 aa12.72□□□□□ -0.37
SGMS1-206ENST00000602565 UBAP2LQ14157 1087 aaKnown RBP12.72□□□□□ -0.37
SGMS1-206ENST00000602565 ATXN7L1Q9ULK2 861 aaPredicted RBP12.72□□□□□ -0.37
SGMS1-206ENST00000602565 BNIP3LO60238 219 aa12.71□□□□□ -0.37
SGMS1-206ENST00000602565 TNP2Q05952 138 aa12.71□□□□□ -0.37
SGMS1-206ENST00000602565 EHHADHQ08426 723 aa12.71□□□□□ -0.37
SGMS1-206ENST00000602565 LAMC2Q13753 1193 aa12.71□□□□□ -0.37
SGMS1-206ENST00000602565 ANKRD33BA6NCL7 494 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 UBAP1LF5GYI3 381 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 EFSO43281 561 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 VEGFBP49765 207 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 DNAJC14Q6Y2X3 702 aaPredicted RBP12.7□□□□□ -0.38
SGMS1-206ENST00000602565 TMC7Q7Z402 723 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 GJD3Q8N144 294 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 DMRTB1Q96MA1 342 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 MARK1Q9P0L2 795 aa12.7□□□□□ -0.38
SGMS1-206ENST00000602565 GPR25O00155 361 aa12.69□□□□□ -0.38
SGMS1-206ENST00000602565 SFSWAPQ12872 951 aaKnown RBP12.69□□□□□ -0.38
SGMS1-206ENST00000602565 NDFIP2Q9NV92 336 aa12.69□□□□□ -0.38
SGMS1-206ENST00000602565 XYLBO75191 536 aa12.68□□□□□ -0.38
SGMS1-206ENST00000602565 KCNQ4P56696 695 aa12.68□□□□□ -0.38
SGMS1-206ENST00000602565 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
SGMS1-206ENST00000602565 NANOS1Q8WY41 292 aaKnown RBP12.68□□□□□ -0.38
SGMS1-206ENST00000602565 FGFR3P22607 806 aa12.67□□□□□ -0.38
SGMS1-206ENST00000602565 FAM129BQ96TA1 746 aa12.67□□□□□ -0.38
SGMS1-206ENST00000602565 CFHR5Q9BXR6 569 aa12.67□□□□□ -0.38
SGMS1-206ENST00000602565 KCNMB2Q9Y691 235 aa12.67□□□□□ -0.38
SGMS1-206ENST00000602565 CD33P20138 364 aa12.66□□□□□ -0.38
SGMS1-206ENST00000602565 TRIP4Q15650 581 aaPredicted RBP12.66□□□□□ -0.38
SGMS1-206ENST00000602565 ZNF438Q7Z4V0 828 aa12.66□□□□□ -0.38
SGMS1-206ENST00000602565 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
SGMS1-206ENST00000602565 C11orf16Q9NQ32 467 aa12.66□□□□□ -0.38
SGMS1-206ENST00000602565 A6NHS1 94 aa12.65□□□□□ -0.38
SGMS1-206ENST00000602565 GRNP28799 593 aaKnown RBP12.65□□□□□ -0.38
SGMS1-206ENST00000602565 PNMA5Q96PV4 448 aa12.65□□□□□ -0.38
SGMS1-206ENST00000602565 STRN4Q9NRL3 753 aa12.65□□□□□ -0.38
SGMS1-206ENST00000602565 CCINQ13939 588 aa12.64□□□□□ -0.39
SGMS1-206ENST00000602565 SLC16A10Q8TF71 515 aa12.64□□□□□ -0.39
SGMS1-206ENST00000602565 H3BM21 787 aa12.63□□□□□ -0.39
SGMS1-206ENST00000602565 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
SGMS1-206ENST00000602565 GPR182O15218 404 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 NEFLP07196 543 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 PLCB3Q01970 1234 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 SPEM2Q0P670 501 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 KRT25Q7Z3Z0 450 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 NIF3L1Q9GZT8 377 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 TREHO43280 583 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 EGFRP00533 1210 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 NPAS4Q8IUM7 802 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 FOXD4L4Q8WXT5 416 aaPredicted RBP12.62□□□□□ -0.39
SGMS1-206ENST00000602565 PRR12Q9ULL5 1215 aa12.62□□□□□ -0.39
SGMS1-206ENST00000602565 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
SGMS1-206ENST00000602565 NLRP13Q86W25 1043 aa12.61□□□□□ -0.39
SGMS1-206ENST00000602565 ALKBH8Q96BT7 664 aaKnown RBP12.61□□□□□ -0.39
SGMS1-206ENST00000602565 GSX2Q9BZM3 304 aa12.61□□□□□ -0.39
SGMS1-206ENST00000602565 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
SGMS1-206ENST00000602565 TERTO14746 1132 aaKnown RBP12.6□□□□□ -0.39
SGMS1-206ENST00000602565 SASH3O75995 380 aa12.6□□□□□ -0.39
SGMS1-206ENST00000602565 BMP4P12644 408 aa12.6□□□□□ -0.39
SGMS1-206ENST00000602565 MX2P20592 715 aa12.6□□□□□ -0.39
SGMS1-206ENST00000602565 MAPK8P45983 427 aa12.6□□□□□ -0.39
SGMS1-206ENST00000602565 XKR5Q6UX68 686 aa12.6□□□□□ -0.39
SGMS1-206ENST00000602565 RARAP10276 462 aa12.59□□□□□ -0.39
SGMS1-206ENST00000602565 RBM25P49756 843 aaKnown RBP12.59□□□□□ -0.39
SGMS1-206ENST00000602565 CTBSQ01459 385 aa12.59□□□□□ -0.39
SGMS1-206ENST00000602565 GRIN2CQ14957 1233 aa12.59□□□□□ -0.39
SGMS1-206ENST00000602565 TTC39BQ5VTQ0 682 aaPredicted RBP12.59□□□□□ -0.39
SGMS1-206ENST00000602565 SNX29Q8TEQ0 813 aa12.59□□□□□ -0.39
SGMS1-206ENST00000602565 BHMTQ93088 406 aa12.59□□□□□ -0.39
SGMS1-206ENST00000602565 EFCC1Q9HA90 598 aa12.59□□□□□ -0.39
SGMS1-206ENST00000602565 NSFL1CQ9UNZ2 370 aaKnown RBP12.59□□□□□ -0.39
SGMS1-206ENST00000602565 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.59□□□□□ -0.39
SGMS1-206ENST00000602565 NFKB1P19838 968 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms