RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 RBM17Q96I25 401 aaKnown RBP7.35□□□□□ -1.23
HCG18-243ENST00000602498 CCDC85AQ96PX6 553 aaPredicted RBP7.35□□□□□ -1.23
HCG18-243ENST00000602498 IFT57Q9NWB7 429 aa7.35□□□□□ -1.23
HCG18-243ENST00000602498 PDZRN3Q9UPQ7 1066 aa7.35□□□□□ -1.23
HCG18-243ENST00000602498 N4BP2Q86UW6 1770 aaPredicted RBP7.35□□□□□ -1.23
HCG18-243ENST00000602498 ZNF541Q9H0D2 1346 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 POTECB2RU33 542 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 GNAI1P63096 354 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 FKBP4Q02790 459 aaKnown RBP eCLIP7.34□□□□□ -1.23
HCG18-243ENST00000602498 PARP10Q53GL7 1025 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 RIC3Q7Z5B4 369 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 WWC1Q8IX03 1113 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 FAM89AQ96GI7 184 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 NLRP3Q96P20 1036 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 MYD88Q99836 296 aa7.34□□□□□ -1.23
HCG18-243ENST00000602498 UBR2Q8IWV8 1755 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 ABCC4O15439 1325 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 KIAA1551Q9HCM1 1747 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 ALDH1B1P30837 517 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 CALD1Q05682 793 aaKnown RBP7.33□□□□□ -1.24
HCG18-243ENST00000602498 GOLGA2Q08379 1002 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 CRY2Q49AN0 593 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 EAPPQ56P03 285 aaPredicted RBP7.33□□□□□ -1.24
HCG18-243ENST00000602498 HSP90AB3PQ58FF7 597 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 SOGA3Q5TF21 947 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 DPY19L2Q6NUT2 758 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 PLBD2Q8NHP8 589 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 GPR101Q96P66 508 aaPredicted RBP7.33□□□□□ -1.24
HCG18-243ENST00000602498 SPINK5Q9NQ38 1064 aaPredicted RBP7.33□□□□□ -1.24
HCG18-243ENST00000602498 HYPKQ9NX55 129 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 DBF4Q9UBU7 674 aaPredicted RBP7.33□□□□□ -1.24
HCG18-243ENST00000602498 GJA3Q9Y6H8 435 aa7.33□□□□□ -1.24
HCG18-243ENST00000602498 SH3TC1Q8TE82 1336 aa7.32□□□□□ -1.24
HCG18-243ENST00000602498 RGL2O15211 777 aa7.32□□□□□ -1.24
HCG18-243ENST00000602498 VEGFAP15692 232 aaPredicted RBP7.32□□□□□ -1.24
HCG18-243ENST00000602498 IARSP41252 1262 aaKnown RBP7.32□□□□□ -1.24
HCG18-243ENST00000602498 AOC3Q16853 763 aa7.32□□□□□ -1.24
HCG18-243ENST00000602498 G2E3Q7L622 706 aa7.32□□□□□ -1.24
HCG18-243ENST00000602498 RTKN2Q8IZC4 609 aa7.32□□□□□ -1.24
HCG18-243ENST00000602498 LARGE2Q8N3Y3 721 aa7.32□□□□□ -1.24
HCG18-243ENST00000602498 RBM46Q8TBY0 533 aaKnown RBP7.32□□□□□ -1.24
HCG18-243ENST00000602498 RNF123Q5XPI4 1314 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 IRS4O14654 1257 aaPredicted RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 PPIP5K2O43314 1243 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 HOXB7P09629 217 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 HOXA10P31260 410 aaPredicted RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 TWISTNBQ3B726 338 aaPredicted RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 SLC10A5Q5PT55 438 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 DDX46Q7L014 1031 aaKnown RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 SMC1BQ8NDV3 1235 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 JDP2Q8WYK2 163 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 CELF1Q92879 486 aaKnown RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 CRAMP1Q96RY5 1269 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 ISCA1Q9BUE6 129 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 TMX4Q9H1E5 349 aaPredicted RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 SEC31BQ9NQW1 1179 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 CLEC11AQ9Y240 323 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 MAP3K2Q9Y2U5 619 aa7.31□□□□□ -1.24
HCG18-243ENST00000602498 SIPA1L3O60292 1781 aaPredicted RBP7.31□□□□□ -1.24
HCG18-243ENST00000602498 LTBP3Q9NS15 1303 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 SLC4A2P04920 1241 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 APLP1P51693 650 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 EXOSC9Q06265 439 aaKnown RBP7.3□□□□□ -1.24
HCG18-243ENST00000602498 GRAPQ13588 217 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 CCDC30Q5VVM6 783 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 DPP8Q6V1X1 898 aaPredicted RBP7.3□□□□□ -1.24
HCG18-243ENST00000602498 GRAPLQ8TC17 118 aaPredicted RBP7.3□□□□□ -1.24
HCG18-243ENST00000602498 ATP6V0A2Q9Y487 856 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 SCN7AQ01118 1682 aa7.3□□□□□ -1.24
HCG18-243ENST00000602498 PI4KAP2A4QPH2 592 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 FZD9O00144 591 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 ZBTB22O15209 634 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 RAD17O75943 681 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 EIF6P56537 245 aaKnown RBP7.29□□□□□ -1.24
HCG18-243ENST00000602498 FMR1Q06787 632 aaKnown RBP eCLIP7.29□□□□□ -1.24
HCG18-243ENST00000602498 FSTL1Q12841 308 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 CWF19L2Q2TBE0 894 aaKnown RBP7.29□□□□□ -1.24
HCG18-243ENST00000602498 MAP1SQ66K74 1059 aaPredicted RBP7.29□□□□□ -1.24
HCG18-243ENST00000602498 NIM1KQ8IY84 436 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 MPNDQ8N594 471 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 PI4KAP1Q8N8J0 262 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 PSMD1Q99460 953 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 STK31Q9BXU1 1019 aa7.29□□□□□ -1.24
HCG18-243ENST00000602498 TAF1DQ9H5J8 278 aaPredicted RBP7.29□□□□□ -1.24
HCG18-243ENST00000602498 NSFL1CQ9UNZ2 370 aaKnown RBP7.29□□□□□ -1.24
HCG18-243ENST00000602498 IBTKQ9P2D0 1353 aaPredicted RBP7.29□□□□□ -1.24
HCG18-243ENST00000602498 ZC3H4Q9UPT8 1303 aaKnown RBP7.28□□□□□ -1.24
HCG18-243ENST00000602498 NRXN2Q9P2S2 1712 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 SHTN1A0MZ66 631 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 F6X3S4 739 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 BBOX1O75936 387 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 DDX58O95786 925 aaKnown RBP7.28□□□□□ -1.24
HCG18-243ENST00000602498 IGKV5-2P06315 115 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 EPHX2P34913 555 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 EPS15P42566 896 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 GPSM2P81274 684 aa7.28□□□□□ -1.24
HCG18-243ENST00000602498 DOK7Q18PE1 504 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms