RNA–Protein interactions for RNA: ENST00000602230.1

BRD4-211, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-211ENST00000602230 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
BRD4-211ENST00000602230 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
BRD4-211ENST00000602230 PTPRCP08575 1304 aa16.74■□□□□ 0.27
BRD4-211ENST00000602230 RARSP54136 660 aaKnown RBP16.74■□□□□ 0.27
BRD4-211ENST00000602230 ERFEQ4G0M1 354 aa16.74■□□□□ 0.27
BRD4-211ENST00000602230 C2CD5Q86YS7 1000 aa16.74■□□□□ 0.27
BRD4-211ENST00000602230 PXDNLA1KZ92 1463 aa16.73■□□□□ 0.27
BRD4-211ENST00000602230 CHRNA5P30532 468 aa16.73■□□□□ 0.27
BRD4-211ENST00000602230 BRPF1P55201 1214 aaPredicted RBP16.73■□□□□ 0.27
BRD4-211ENST00000602230 YTHDC1Q96MU7 727 aaKnown RBP16.73■□□□□ 0.27
BRD4-211ENST00000602230 CWC25Q9NXE8 425 aaPredicted RBP16.73■□□□□ 0.27
BRD4-211ENST00000602230 N4BP2Q86UW6 1770 aaPredicted RBP16.73■□□□□ 0.27
BRD4-211ENST00000602230 SH3TC1Q8TE82 1336 aa16.72■□□□□ 0.27
BRD4-211ENST00000602230 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
BRD4-211ENST00000602230 F6X3S4 739 aa16.72■□□□□ 0.27
BRD4-211ENST00000602230 GPR162Q16538 588 aa16.72■□□□□ 0.27
BRD4-211ENST00000602230 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
BRD4-211ENST00000602230 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
BRD4-211ENST00000602230 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
BRD4-211ENST00000602230 IGKV5-2P06315 115 aa16.71■□□□□ 0.27
BRD4-211ENST00000602230 KCNA3P22001 575 aa16.71■□□□□ 0.27
BRD4-211ENST00000602230 ZBTB38Q8NAP3 1195 aaPredicted RBP16.71■□□□□ 0.27
BRD4-211ENST00000602230 LINS1Q8NG48 757 aa16.71■□□□□ 0.27
BRD4-211ENST00000602230 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
BRD4-211ENST00000602230 KLRG2A4D1S0 409 aaPredicted RBP16.7■□□□□ 0.26
BRD4-211ENST00000602230 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
BRD4-211ENST00000602230 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
BRD4-211ENST00000602230 SLC4A10Q6U841 1118 aa16.7■□□□□ 0.26
BRD4-211ENST00000602230 ZNF622Q969S3 477 aaKnown RBP eCLIP16.7■□□□□ 0.261e-18■□□□□ 11
BRD4-211ENST00000602230 FAM89AQ96GI7 184 aa16.7■□□□□ 0.26
BRD4-211ENST00000602230 NLRP3Q96P20 1036 aa16.7■□□□□ 0.26
BRD4-211ENST00000602230 NOB1Q9ULX3 412 aaKnown RBP16.7■□□□□ 0.26
BRD4-211ENST00000602230 KIF16BQ96L93 1317 aa16.7■□□□□ 0.26
BRD4-211ENST00000602230 ABCC12Q96J65 1359 aa16.69■□□□□ 0.26
BRD4-211ENST00000602230 SRGNP10124 158 aa16.69■□□□□ 0.26
BRD4-211ENST00000602230 CWF19L2Q2TBE0 894 aaKnown RBP16.69■□□□□ 0.26
BRD4-211ENST00000602230 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
BRD4-211ENST00000602230 SYNE4Q8N205 404 aa16.69■□□□□ 0.26
BRD4-211ENST00000602230 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
BRD4-211ENST00000602230 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
BRD4-211ENST00000602230 IPO8O15397 1037 aaKnown RBP16.68■□□□□ 0.26
BRD4-211ENST00000602230 PCCAP05165 728 aaPredicted RBP16.68■□□□□ 0.26
BRD4-211ENST00000602230 HCLS1P14317 486 aaPredicted RBP16.68■□□□□ 0.26
BRD4-211ENST00000602230 NPR1P16066 1061 aa16.68■□□□□ 0.26
BRD4-211ENST00000602230 RTL5Q5HYW3 569 aaPredicted RBP16.68■□□□□ 0.26
BRD4-211ENST00000602230 BEND3Q5T5X7 828 aa16.68■□□□□ 0.26
BRD4-211ENST00000602230 STYK1Q6J9G0 422 aa16.68■□□□□ 0.26
BRD4-211ENST00000602230 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
BRD4-211ENST00000602230 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
BRD4-211ENST00000602230 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
BRD4-211ENST00000602230 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
BRD4-211ENST00000602230 IRS4O14654 1257 aaPredicted RBP16.67■□□□□ 0.26
BRD4-211ENST00000602230 GRIN3BO60391 1043 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 BCAR3O75815 825 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 GCKRQ14397 625 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 ARHGAP45Q92619 1136 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 RPGRQ92834 1020 aaKnown RBP16.67■□□□□ 0.26
BRD4-211ENST00000602230 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
BRD4-211ENST00000602230 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
BRD4-211ENST00000602230 ALDH1B1P30837 517 aa16.66■□□□□ 0.26
BRD4-211ENST00000602230 BRCA1P38398 1863 aaKnown RBP16.66■□□□□ 0.26
BRD4-211ENST00000602230 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
BRD4-211ENST00000602230 H7C1W4 665 aa16.65■□□□□ 0.26
BRD4-211ENST00000602230 YBX3P16989 372 aaKnown RBP eCLIP16.65■□□□□ 0.26
BRD4-211ENST00000602230 JARID2Q92833 1246 aaPredicted RBP16.65■□□□□ 0.26
BRD4-211ENST00000602230 FRAT1Q92837 279 aaPredicted RBP16.65■□□□□ 0.26
BRD4-211ENST00000602230 CDHR2Q9BYE9 1310 aa16.65■□□□□ 0.26
BRD4-211ENST00000602230 PDE8AO60658 829 aa16.64■□□□□ 0.25
BRD4-211ENST00000602230 HOXA10P31260 410 aaPredicted RBP16.64■□□□□ 0.25
BRD4-211ENST00000602230 UBE3BQ7Z3V4 1068 aa16.64■□□□□ 0.25
BRD4-211ENST00000602230 RBM17Q96I25 401 aaKnown RBP16.64■□□□□ 0.25
BRD4-211ENST00000602230 C9orf78Q9NZ63 289 aaPredicted RBP16.64■□□□□ 0.25
BRD4-211ENST00000602230 TNRC6CQ9HCJ0 1690 aaKnown RBP16.64■□□□□ 0.25
BRD4-211ENST00000602230 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
BRD4-211ENST00000602230 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
BRD4-211ENST00000602230 SF3B3Q15393 1217 aaKnown RBP16.63■□□□□ 0.25
BRD4-211ENST00000602230 C3orf67Q6ZVT6 689 aa16.63■□□□□ 0.25
BRD4-211ENST00000602230 CRAMP1Q96RY5 1269 aa16.63■□□□□ 0.25
BRD4-211ENST00000602230 DDX60Q8IY21 1712 aaKnown RBP16.62■□□□□ 0.25
BRD4-211ENST00000602230 GRM8O00222 908 aa16.62■□□□□ 0.25
BRD4-211ENST00000602230 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
BRD4-211ENST00000602230 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
BRD4-211ENST00000602230 DDX46Q7L014 1031 aaKnown RBP16.62■□□□□ 0.25
BRD4-211ENST00000602230 RCAN3Q9UKA8 241 aa16.62■□□□□ 0.25
BRD4-211ENST00000602230 ARFGEF1Q9Y6D6 1849 aa16.61■□□□□ 0.25
BRD4-211ENST00000602230 PRPF40BQ6NWY9 871 aaKnown RBP16.61■□□□□ 0.25
BRD4-211ENST00000602230 LAMB2P55268 1798 aa16.61■□□□□ 0.25
BRD4-211ENST00000602230 TRIM27P14373 513 aa16.6■□□□□ 0.25
BRD4-211ENST00000602230 CASP7P55210 303 aa16.6■□□□□ 0.25
BRD4-211ENST00000602230 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
BRD4-211ENST00000602230 PLA2G12BQ9BX93 195 aa16.6■□□□□ 0.25
BRD4-211ENST00000602230 CACNA1SQ13698 1873 aa16.6■□□□□ 0.25
BRD4-211ENST00000602230 SLX4Q8IY92 1834 aa16.59■□□□□ 0.25
BRD4-211ENST00000602230 C21orf2O43822 256 aa16.59■□□□□ 0.25
BRD4-211ENST00000602230 SOGA3Q5TF21 947 aa16.59■□□□□ 0.25
BRD4-211ENST00000602230 ARHGAP27Q6ZUM4 889 aa16.59■□□□□ 0.25
BRD4-211ENST00000602230 ZNF219Q9P2Y4 722 aaPredicted RBP16.59■□□□□ 0.25
BRD4-211ENST00000602230 BBOX1O75936 387 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms