RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 ZNF219Q9P2Y4 722 aaPredicted RBP20.66■□□□□ 0.9
CCDC61-208ENST00000601763 CACNA1SQ13698 1873 aa20.66■□□□□ 0.9
CCDC61-208ENST00000601763 SLX4Q8IY92 1834 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 IBTKQ9P2D0 1353 aaPredicted RBP20.65■□□□□ 0.9
CCDC61-208ENST00000601763 E9PSI1 815 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 YY1P25490 414 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 PARP10Q53GL7 1025 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 JARID2Q92833 1246 aaPredicted RBP20.65■□□□□ 0.9
CCDC61-208ENST00000601763 UTP14AQ9BVJ6 771 aaKnown RBP20.65■□□□□ 0.9
CCDC61-208ENST00000601763 NYXQ9GZU5 481 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 MAP3K2Q9Y2U5 619 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 CHD4Q14839 1912 aa20.65■□□□□ 0.9
CCDC61-208ENST00000601763 PI4KAP2A4QPH2 592 aa20.64■□□□□ 0.89
CCDC61-208ENST00000601763 HCLS1P14317 486 aaPredicted RBP20.64■□□□□ 0.89
CCDC61-208ENST00000601763 HSP90AB3PQ58FF7 597 aa20.64■□□□□ 0.89
CCDC61-208ENST00000601763 RTL5Q5HYW3 569 aaPredicted RBP20.64■□□□□ 0.89
CCDC61-208ENST00000601763 ARHGAP27Q6ZUM4 889 aa20.64■□□□□ 0.89
CCDC61-208ENST00000601763 PI4KAP1Q8N8J0 262 aa20.64■□□□□ 0.89
CCDC61-208ENST00000601763 HNRNPUQ00839 825 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCDC61-208ENST00000601763 FLIIQ13045 1269 aa20.63■□□□□ 0.89
CCDC61-208ENST00000601763 OLFM4Q6UX06 510 aa20.63■□□□□ 0.89
CCDC61-208ENST00000601763 PPP1R42Q7Z4L9 355 aa20.63■□□□□ 0.89
CCDC61-208ENST00000601763 TTLL6Q8N841 843 aa20.63■□□□□ 0.89
CCDC61-208ENST00000601763 TRMT112Q9UI30 125 aaKnown RBP20.63■□□□□ 0.89
CCDC61-208ENST00000601763 LAMB2P55268 1798 aa20.62■□□□□ 0.89
CCDC61-208ENST00000601763 KSR2Q6VAB6 950 aa20.62■□□□□ 0.89
CCDC61-208ENST00000601763 FAM89AQ96GI7 184 aa20.62■□□□□ 0.89
CCDC61-208ENST00000601763 METTL22Q9BUU2 404 aaPredicted RBP20.62■□□□□ 0.89
CCDC61-208ENST00000601763 IGKV5-2P06315 115 aa20.61■□□□□ 0.89
CCDC61-208ENST00000601763 PRELPP51888 382 aa20.61■□□□□ 0.89
CCDC61-208ENST00000601763 RASSF7Q02833 373 aa20.61■□□□□ 0.89
CCDC61-208ENST00000601763 CRY2Q49AN0 593 aa20.61■□□□□ 0.89
CCDC61-208ENST00000601763 STYK1Q6J9G0 422 aa20.61■□□□□ 0.89
CCDC61-208ENST00000601763 MASTLQ96GX5 879 aa20.61■□□□□ 0.89
CCDC61-208ENST00000601763 DDX60Q8IY21 1712 aaKnown RBP20.61■□□□□ 0.89
CCDC61-208ENST00000601763 F6X3S4 739 aa20.6■□□□□ 0.89
CCDC61-208ENST00000601763 C21orf2O43822 256 aa20.6■□□□□ 0.89
CCDC61-208ENST00000601763 SLC10A5Q5PT55 438 aa20.6■□□□□ 0.89
CCDC61-208ENST00000601763 PRPF40BQ6NWY9 871 aaKnown RBP20.6■□□□□ 0.89
CCDC61-208ENST00000601763 COL4A1P02462 1669 aa20.6■□□□□ 0.89
CCDC61-208ENST00000601763 RIC1Q4ADV7 1423 aa20.6■□□□□ 0.89
CCDC61-208ENST00000601763 NPR1P16066 1061 aa20.59■□□□□ 0.89
CCDC61-208ENST00000601763 TRIM28Q13263 835 aaKnown RBP20.59■□□□□ 0.89
CCDC61-208ENST00000601763 CWF19L2Q2TBE0 894 aaKnown RBP20.59■□□□□ 0.89
CCDC61-208ENST00000601763 BCL2L13Q9BXK5 485 aa20.59■□□□□ 0.89
CCDC61-208ENST00000601763 DDX58O95786 925 aaKnown RBP20.58■□□□□ 0.89
CCDC61-208ENST00000601763 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.89
CCDC61-208ENST00000601763 C7orf43Q8WVR3 580 aa20.58■□□□□ 0.89
CCDC61-208ENST00000601763 CHMP4AQ9BY43 222 aa20.58■□□□□ 0.89
CCDC61-208ENST00000601763 SH3TC1Q8TE82 1336 aa20.57■□□□□ 0.88
CCDC61-208ENST00000601763 NFKBIEO00221 500 aa20.57■□□□□ 0.88
CCDC61-208ENST00000601763 MRPL50Q8N5N7 158 aaKnown RBP20.57■□□□□ 0.88
CCDC61-208ENST00000601763 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
CCDC61-208ENST00000601763 PDZRN3Q9UPQ7 1066 aa20.57■□□□□ 0.88
CCDC61-208ENST00000601763 TAF1P21675 1872 aa20.56■□□□□ 0.88
CCDC61-208ENST00000601763 CNKSR1Q969H4 720 aa20.56■□□□□ 0.88
CCDC61-208ENST00000601763 CACNA1FO60840 1977 aa20.55■□□□□ 0.88
CCDC61-208ENST00000601763 NEURL1BA8MQ27 555 aa20.54■□□□□ 0.88
CCDC61-208ENST00000601763 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
CCDC61-208ENST00000601763 CCDC191Q8NCU4 936 aa20.54■□□□□ 0.88
CCDC61-208ENST00000601763 DNAAF4Q8WXU2 420 aa20.54■□□□□ 0.88
CCDC61-208ENST00000601763 NLRP3Q96P20 1036 aa20.54■□□□□ 0.88
CCDC61-208ENST00000601763 CWC25Q9NXE8 425 aaPredicted RBP20.54■□□□□ 0.88
CCDC61-208ENST00000601763 SBF1O95248 1867 aa20.54■□□□□ 0.88
CCDC61-208ENST00000601763 RNF123Q5XPI4 1314 aa20.53■□□□□ 0.88
CCDC61-208ENST00000601763 IRS4O14654 1257 aaPredicted RBP20.53■□□□□ 0.88
CCDC61-208ENST00000601763 ZBTB38Q8NAP3 1195 aaPredicted RBP20.53■□□□□ 0.88
CCDC61-208ENST00000601763 RPGRQ92834 1020 aaKnown RBP20.53■□□□□ 0.88
CCDC61-208ENST00000601763 FER1L6Q2WGJ9 1857 aa20.52■□□□□ 0.88
CCDC61-208ENST00000601763 PCCAP05165 728 aaPredicted RBP20.52■□□□□ 0.88
CCDC61-208ENST00000601763 C9orf131Q5VYM1 1079 aa20.52■□□□□ 0.88
CCDC61-208ENST00000601763 ZNF784Q8NCA9 323 aaPredicted RBP20.52■□□□□ 0.88
CCDC61-208ENST00000601763 ABCC4O15439 1325 aa20.52■□□□□ 0.87
CCDC61-208ENST00000601763 SNED1Q8TER0 1413 aa20.51■□□□□ 0.87
CCDC61-208ENST00000601763 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
CCDC61-208ENST00000601763 RBM17Q96I25 401 aaKnown RBP20.5■□□□□ 0.87
CCDC61-208ENST00000601763 CRAMP1Q96RY5 1269 aa20.5■□□□□ 0.87
CCDC61-208ENST00000601763 CCDC88AQ3V6T2 1871 aa20.5■□□□□ 0.87
CCDC61-208ENST00000601763 ALDH1B1P30837 517 aa20.49■□□□□ 0.87
CCDC61-208ENST00000601763 NEXNQ0ZGT2 675 aa20.49■□□□□ 0.87
CCDC61-208ENST00000601763 GCKRQ14397 625 aa20.49■□□□□ 0.87
CCDC61-208ENST00000601763 CCDC85AQ96PX6 553 aaPredicted RBP20.49■□□□□ 0.87
CCDC61-208ENST00000601763 RNF181Q9P0P0 153 aa20.49■□□□□ 0.87
CCDC61-208ENST00000601763 H7C1W4 665 aa20.48■□□□□ 0.87
CCDC61-208ENST00000601763 CASP7P55210 303 aa20.48■□□□□ 0.87
CCDC61-208ENST00000601763 SF3B3Q15393 1217 aaKnown RBP20.48■□□□□ 0.87
CCDC61-208ENST00000601763 UBE3BQ7Z3V4 1068 aa20.48■□□□□ 0.87
CCDC61-208ENST00000601763 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
CCDC61-208ENST00000601763 ZNF526Q8TF50 670 aaPredicted RBP20.48■□□□□ 0.87
CCDC61-208ENST00000601763 SEC31BQ9NQW1 1179 aa20.48■□□□□ 0.87
CCDC61-208ENST00000601763 SMC4Q9NTJ3 1288 aa20.48■□□□□ 0.87
CCDC61-208ENST00000601763 PPEF1O14829 653 aaPredicted RBP20.47■□□□□ 0.87
CCDC61-208ENST00000601763 SLC4A10Q6U841 1118 aa20.47■□□□□ 0.87
CCDC61-208ENST00000601763 CELF1Q92879 486 aaKnown RBP20.47■□□□□ 0.87
CCDC61-208ENST00000601763 ZBED9Q6R2W3 1325 aa20.47■□□□□ 0.87
CCDC61-208ENST00000601763 RARSP54136 660 aaKnown RBP20.46■□□□□ 0.87
CCDC61-208ENST00000601763 ALDH1L2Q3SY69 923 aa20.46■□□□□ 0.87
CCDC61-208ENST00000601763 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
CCDC61-208ENST00000601763 CDHR2Q9BYE9 1310 aa20.46■□□□□ 0.87
CCDC61-208ENST00000601763 DDX46Q7L014 1031 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms