RNA–Protein interactions for RNA: ENST00000601538.5

SHANK2-218, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHANK2, Length 9,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-218ENST00000601538 LRRC27Q9C0I9 530 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 ZNF76P36508 570 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 TMC6Q7Z403 805 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 GBP7Q8N8V2 638 aaPredicted RBP13.97□□□□□ -0.17
SHANK2-218ENST00000601538 CIB2O75838 187 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 KIAA1524Q8TCG1 905 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 PPFIA2O75334 1257 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 C10orf67Q8IYJ2 551 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 GOLGA5Q8TBA6 731 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 MACROD2A1Z1Q3 448 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 GMNNO75496 209 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 ERCC6LQ2NKX8 1250 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 CPLX4Q7Z7G2 160 aa13.97□□□□□ -0.17
SHANK2-218ENST00000601538 PHLDB2Q86SQ0 1253 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 CYLC1P35663 651 aaPredicted RBP13.96□□□□□ -0.17
SHANK2-218ENST00000601538 FAM76AQ8TAV0 307 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 RAB3GAP1Q15042 981 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 CNNM3Q8NE01 707 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 A0A087WZG4 1122 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 BUB1BO60566 1050 aaPredicted RBP13.96□□□□□ -0.17
SHANK2-218ENST00000601538 RAB11FIP3O75154 756 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 BAG4O95429 457 aaKnown RBP13.96□□□□□ -0.17
SHANK2-218ENST00000601538 MCM6Q14566 821 aa13.96□□□□□ -0.17
SHANK2-218ENST00000601538 TRMT1Q9NXH9 659 aaKnown RBP13.96□□□□□ -0.18
SHANK2-218ENST00000601538 AKAP2Q9Y2D5 859 aa13.96□□□□□ -0.18
SHANK2-218ENST00000601538 CFAP58Q5T655 872 aa13.96□□□□□ -0.18
SHANK2-218ENST00000601538 RMND1Q9NWS8 449 aa13.96□□□□□ -0.18
SHANK2-218ENST00000601538 C8orf76Q96K31 380 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.95□□□□□ -0.182e-7■■■□□ 16.3
SHANK2-218ENST00000601538 NOB1Q9ULX3 412 aaKnown RBP13.95□□□□□ -0.18
SHANK2-218ENST00000601538 YY1AP1Q9H869 796 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 TPD52P55327 224 aaPredicted RBP13.95□□□□□ -0.18
SHANK2-218ENST00000601538 KLHL10Q6JEL2 608 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 TBC1D5Q92609 795 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 CNNM1Q9NRU3 951 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 MTMR7Q9Y216 660 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 PUS7Q96PZ0 661 aaKnown RBP13.95□□□□□ -0.18
SHANK2-218ENST00000601538 ATP2A2P16615 1042 aaKnown RBP13.95□□□□□ -0.18
SHANK2-218ENST00000601538 ZNF165P49910 485 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 TSGA10Q9BZW7 698 aa13.95□□□□□ -0.18
SHANK2-218ENST00000601538 ABCA5Q8WWZ7 1642 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 LMBR1Q8WVP7 490 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 NCAPD3P42695 1498 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 CNGA1P29973 690 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 DAPK1P53355 1430 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 TWISTNBQ3B726 338 aaPredicted RBP13.94□□□□□ -0.18
SHANK2-218ENST00000601538 SF3B2Q13435 895 aaKnown RBP13.94□□□□□ -0.18
SHANK2-218ENST00000601538 WHAMMP3Q1A5X7 153 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 KIF5AQ12840 1032 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 CCDC14Q49A88 953 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 DCAF8L1A6NGE4 600 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 DZIP1Q86YF9 867 aaKnown RBP13.94□□□□□ -0.18
SHANK2-218ENST00000601538 NOP2P46087 812 aaKnown RBP13.94□□□□□ -0.18
SHANK2-218ENST00000601538 ARHGAP24Q8N264 748 aa13.94□□□□□ -0.18
SHANK2-218ENST00000601538 MED4Q9NPJ6 270 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 PSME1Q06323 249 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 ZSCAN16Q9H4T2 348 aaPredicted RBP13.93□□□□□ -0.18
SHANK2-218ENST00000601538 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 VAV2P52735 878 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 PRPF4BQ13523 1007 aaKnown RBP13.93□□□□□ -0.18
SHANK2-218ENST00000601538 ADGBQ8N7X0 1667 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 CECR2Q9BXF3 1484 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 PCK1P35558 622 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 USP37Q86T82 979 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 ARHGEF12Q9NZN5 1544 aa13.93□□□□□ -0.18
SHANK2-218ENST00000601538 ZKSCAN8Q15776 578 aaPredicted RBP13.93□□□□□ -0.18
SHANK2-218ENST00000601538 MTIF2P46199 727 aaKnown RBP13.93□□□□□ -0.18
SHANK2-218ENST00000601538 PRC1O43663 620 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 PSMC4P43686 418 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 STRN4Q9NRL3 753 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 MAP7Q14244 749 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 EFCAB13Q8IY85 973 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 EHMT1Q9H9B1 1298 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 HMGB2P26583 209 aaKnown RBP13.92□□□□□ -0.18
SHANK2-218ENST00000601538 LIMCH1Q9UPQ0 1083 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 KRT86O43790 486 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-218ENST00000601538 SPAG1Q07617 926 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 ZNF526Q8TF50 670 aaPredicted RBP13.92□□□□□ -0.18
SHANK2-218ENST00000601538 CLNS1AP54105 237 aaKnown RBP13.92□□□□□ -0.18
SHANK2-218ENST00000601538 KRT83P78385 493 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 SMC1BQ8NDV3 1235 aa13.92□□□□□ -0.18
SHANK2-218ENST00000601538 PPP1R9BQ96SB3 815 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 CWC27Q6UX04 472 aaKnown RBP13.91□□□□□ -0.18
SHANK2-218ENST00000601538 HNRNPMP52272 730 aaKnown RBP eCLIP13.91□□□□□ -0.185e-7■■■■■ 33.3
SHANK2-218ENST00000601538 CROCCP2Q86T23 111 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 IRX4P78413 519 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
SHANK2-218ENST00000601538 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 TCP11L2Q8N4U5 519 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 KDM4AO75164 1064 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 MX1P20591 662 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 AACSQ86V21 672 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 RPAP2Q8IXW5 612 aaPredicted RBP13.91□□□□□ -0.18
SHANK2-218ENST00000601538 CALML4Q96GE6 196 aa13.91□□□□□ -0.18
SHANK2-218ENST00000601538 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms