RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
CHMP2A-207ENST00000600804 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
CHMP2A-207ENST00000600804 PTPRCP08575 1304 aa14.86□□□□□ -0.03
CHMP2A-207ENST00000600804 ADAMTSL1Q8N6G6 1762 aa14.85□□□□□ -0.03
CHMP2A-207ENST00000600804 VEGFAP15692 232 aaPredicted RBP14.85□□□□□ -0.03
CHMP2A-207ENST00000600804 FLIIQ13045 1269 aa14.85□□□□□ -0.03
CHMP2A-207ENST00000600804 PRR5LQ6MZQ0 368 aa14.85□□□□□ -0.03
CHMP2A-207ENST00000600804 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
CHMP2A-207ENST00000600804 IPO8O15397 1037 aaKnown RBP14.84□□□□□ -0.03
CHMP2A-207ENST00000600804 CAPN15O75808 1086 aa14.84□□□□□ -0.03
CHMP2A-207ENST00000600804 BCAR3O75815 825 aa14.84□□□□□ -0.03
CHMP2A-207ENST00000600804 NPM2Q86SE8 214 aaKnown RBP14.84□□□□□ -0.03
CHMP2A-207ENST00000600804 RNF123Q5XPI4 1314 aa14.84□□□□□ -0.03
CHMP2A-207ENST00000600804 H0YIN7 160 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 ANXA1P04083 346 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 POTEIP0CG38 1075 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 POTEJP0CG39 1038 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 HSPA1AP0DMV8 641 aaKnown RBP14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 HSPA1BP0DMV9 641 aaKnown RBP14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 MYL6BP14649 208 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 COPS6Q7L5N1 327 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 G2E3Q7L622 706 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 XAGE3Q8WTP9 111 aa14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 PHAXQ9H814 394 aaKnown RBP14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 ZNF219Q9P2Y4 722 aaPredicted RBP14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 IBTKQ9P2D0 1353 aaPredicted RBP14.83□□□□□ -0.04
CHMP2A-207ENST00000600804 NUP98P52948 1817 aa14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 C21orf2O43822 256 aa14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 DDX58O95786 925 aaKnown RBP14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 PIP4K2AP48426 406 aaPredicted RBP14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 CLEC4GQ6UXB4 293 aa14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 PLBD2Q8NHP8 589 aa14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 BCL2L13Q9BXK5 485 aa14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 TBC1D2BQ9UPU7 963 aa14.82□□□□□ -0.04
CHMP2A-207ENST00000600804 KSR2Q6VAB6 950 aa14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 KIF6Q6ZMV9 814 aa14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 ANKRD13DQ6ZTN6 518 aa14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 DZIP3Q86Y13 1208 aaKnown RBP14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 TNS4Q8IZW8 715 aa14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 API5Q9BZZ5 524 aaKnown RBP14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 NOB1Q9ULX3 412 aaKnown RBP14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 MAP3K15Q6ZN16 1313 aa14.81□□□□□ -0.04
CHMP2A-207ENST00000600804 CAMTA2O94983 1202 aa14.8□□□□□ -0.04
CHMP2A-207ENST00000600804 FKBP5Q13451 457 aaPredicted RBP14.8□□□□□ -0.04
CHMP2A-207ENST00000600804 ZKSCAN2Q63HK3 967 aa14.8□□□□□ -0.04
CHMP2A-207ENST00000600804 ATF7IPQ6VMQ6 1270 aa14.8□□□□□ -0.04
CHMP2A-207ENST00000600804 TTLL7Q6ZT98 887 aa14.8□□□□□ -0.04
CHMP2A-207ENST00000600804 ZNF622Q969S3 477 aaKnown RBP eCLIP14.8□□□□□ -0.048e-8■□□□□ 10.7
CHMP2A-207ENST00000600804 BRIP1Q9BX63 1249 aa14.8□□□□□ -0.04
CHMP2A-207ENST00000600804 MS4A1P11836 297 aa14.79□□□□□ -0.04
CHMP2A-207ENST00000600804 HSP90AB3PQ58FF7 597 aa14.79□□□□□ -0.04
CHMP2A-207ENST00000600804 LTBP3Q9NS15 1303 aa14.79□□□□□ -0.04
CHMP2A-207ENST00000600804 ANKRD36CQ5JPF3 1778 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 LTBP1Q14766 1721 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 PI4KAP2A4QPH2 592 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 DDNO94850 711 aaPredicted RBP14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 TRIM27P14373 513 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 AIMP1Q12904 312 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 TRIM28Q13263 835 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 ERFEQ4G0M1 354 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 GIGYF2Q6Y7W6 1299 aaKnown RBP14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 PI4KAP1Q8N8J0 262 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 DNAAF4Q8WXU2 420 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 ZNF652Q9Y2D9 606 aa14.78□□□□□ -0.04
CHMP2A-207ENST00000600804 ABCC4O15439 1325 aa14.77□□□□□ -0.04
CHMP2A-207ENST00000600804 PDE6BP35913 854 aa14.77□□□□□ -0.05
CHMP2A-207ENST00000600804 RRP1P56182 461 aaKnown RBP14.77□□□□□ -0.05
CHMP2A-207ENST00000600804 PDE3AQ14432 1141 aa14.77□□□□□ -0.05
CHMP2A-207ENST00000600804 METTL22Q9BUU2 404 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-207ENST00000600804 ZNF330Q9Y3S2 320 aaPredicted RBP14.77□□□□□ -0.05
CHMP2A-207ENST00000600804 COL4A5P29400 1685 aa14.77□□□□□ -0.05
CHMP2A-207ENST00000600804 SRGNP10124 158 aa14.76□□□□□ -0.05
CHMP2A-207ENST00000600804 PRPF40BQ6NWY9 871 aaKnown RBP14.76□□□□□ -0.05
CHMP2A-207ENST00000600804 RIC3Q7Z5B4 369 aa14.76□□□□□ -0.05
CHMP2A-207ENST00000600804 C7orf43Q8WVR3 580 aa14.76□□□□□ -0.05
CHMP2A-207ENST00000600804 TAOK3Q9H2K8 898 aa14.76□□□□□ -0.05
CHMP2A-207ENST00000600804 MAP3K2Q9Y2U5 619 aa14.76□□□□□ -0.05
CHMP2A-207ENST00000600804 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 PASKQ96RG2 1323 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 TCIRG1Q13488 830 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 OLFM4Q6UX06 510 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 CNBD1Q8NA66 436 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 FRAT1Q92837 279 aaPredicted RBP14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 ISCA1Q9BUE6 129 aa14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 MKRN1Q9UHC7 482 aaKnown RBP14.75□□□□□ -0.05
CHMP2A-207ENST00000600804 TRPM7Q96QT4 1865 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 CCT4P50991 539 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 NEXNQ0ZGT2 675 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 HLFQ16534 295 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 INTS3Q68E01 1043 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 STYK1Q6J9G0 422 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 DPY19L2Q6NUT2 758 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 ZNF34Q8IZ26 560 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 LINS1Q8NG48 757 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 ZBTB3Q9H5J0 574 aa14.74□□□□□ -0.05
CHMP2A-207ENST00000600804 PDZRN3Q9UPQ7 1066 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms