RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 XAGE3Q8WTP9 111 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 NECTIN2Q92692 538 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 NMRK2Q9NPI5 230 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 CHPF2Q9P2E5 772 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 CACNA1FO60840 1977 aa14.18□□□□□ -0.14
SIN3B-210ENST00000599880 DDX60Q8IY21 1712 aaKnown RBP14.18□□□□□ -0.14
SIN3B-210ENST00000599880 SNED1Q8TER0 1413 aa14.17□□□□□ -0.14
SIN3B-210ENST00000599880 TOMM70O94826 608 aa14.17□□□□□ -0.14
SIN3B-210ENST00000599880 MRS2Q9HD23 443 aa14.17□□□□□ -0.14
SIN3B-210ENST00000599880 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
SIN3B-210ENST00000599880 GLTPD2A6NH11 291 aa14.16□□□□□ -0.14
SIN3B-210ENST00000599880 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
SIN3B-210ENST00000599880 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
SIN3B-210ENST00000599880 UTP14AQ9BVJ6 771 aaKnown RBP14.16□□□□□ -0.14
SIN3B-210ENST00000599880 CHMP4AQ9BY43 222 aa14.16□□□□□ -0.14
SIN3B-210ENST00000599880 HYPKQ9NX55 129 aa14.16□□□□□ -0.14
SIN3B-210ENST00000599880 CEP350Q5VT06 3117 aa14.16□□□□□ -0.14
SIN3B-210ENST00000599880 AIMP1Q12904 312 aaKnown RBP14.15□□□□□ -0.14
SIN3B-210ENST00000599880 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
SIN3B-210ENST00000599880 SLC10A5Q5PT55 438 aa14.15□□□□□ -0.14
SIN3B-210ENST00000599880 RTKN2Q8IZC4 609 aa14.15□□□□□ -0.14
SIN3B-210ENST00000599880 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.14
SIN3B-210ENST00000599880 SCN4AP35499 1836 aa14.15□□□□□ -0.14
SIN3B-210ENST00000599880 HSPA6P17066 643 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 FKBP4Q02790 459 aaKnown RBP eCLIP14.14□□□□□ -0.15
SIN3B-210ENST00000599880 GRIPAP1Q4V328 841 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 CC2D2BQ6DHV5 1058 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 NLRP10Q86W26 655 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 RBM46Q8TBY0 533 aaKnown RBP14.14□□□□□ -0.15
SIN3B-210ENST00000599880 NLRP3Q96P20 1036 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 CRAMP1Q96RY5 1269 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 IL16Q14005 1332 aa14.14□□□□□ -0.15
SIN3B-210ENST00000599880 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
SIN3B-210ENST00000599880 WWC1Q8IX03 1113 aa14.13□□□□□ -0.15
SIN3B-210ENST00000599880 C16orf71Q8IYS4 520 aaPredicted RBP14.13□□□□□ -0.15
SIN3B-210ENST00000599880 RBM17Q96I25 401 aaKnown RBP14.13□□□□□ -0.15
SIN3B-210ENST00000599880 SH3TC1Q8TE82 1336 aa14.13□□□□□ -0.15
SIN3B-210ENST00000599880 LRRC37AA6NMS7 1700 aa14.12□□□□□ -0.15
SIN3B-210ENST00000599880 PSMD1Q99460 953 aa14.12□□□□□ -0.15
SIN3B-210ENST00000599880 RRAGCQ9HB90 399 aa14.12□□□□□ -0.15
SIN3B-210ENST00000599880 VEGFAP15692 232 aaPredicted RBP14.11□□□□□ -0.15
SIN3B-210ENST00000599880 TAF1P21675 1872 aa14.11□□□□□ -0.15
SIN3B-210ENST00000599880 FSTL1Q12841 308 aa14.11□□□□□ -0.15
SIN3B-210ENST00000599880 C8orf58Q8NAV2 365 aa14.11□□□□□ -0.15
SIN3B-210ENST00000599880 ISCA1Q9BUE6 129 aa14.11□□□□□ -0.15
SIN3B-210ENST00000599880 TRMT112Q9UI30 125 aaKnown RBP14.11□□□□□ -0.15
SIN3B-210ENST00000599880 GOLGA2Q08379 1002 aa14.1□□□□□ -0.15
SIN3B-210ENST00000599880 TRIM28Q13263 835 aaKnown RBP14.1□□□□□ -0.15
SIN3B-210ENST00000599880 CCDC30Q5VVM6 783 aa14.1□□□□□ -0.15
SIN3B-210ENST00000599880 C3orf67Q6ZVT6 689 aa14.1□□□□□ -0.15
SIN3B-210ENST00000599880 MYH3P11055 1940 aa14.09□□□□□ -0.15
SIN3B-210ENST00000599880 ELL2O00472 640 aaPredicted RBP14.09□□□□□ -0.15
SIN3B-210ENST00000599880 PPEF1O14829 653 aaPredicted RBP14.09□□□□□ -0.15
SIN3B-210ENST00000599880 OLFM4Q6UX06 510 aa14.09□□□□□ -0.15
SIN3B-210ENST00000599880 IARSP41252 1262 aaKnown RBP14.08□□□□□ -0.16
SIN3B-210ENST00000599880 APLP1P51693 650 aa14.08□□□□□ -0.16
SIN3B-210ENST00000599880 SMC1BQ8NDV3 1235 aa14.08□□□□□ -0.16
SIN3B-210ENST00000599880 TSR2Q969E8 191 aaKnown RBP14.08□□□□□ -0.16
SIN3B-210ENST00000599880 PHAXQ9H814 394 aaKnown RBP14.08□□□□□ -0.16
SIN3B-210ENST00000599880 ZNF277Q9NRM2 450 aaPredicted RBP14.08□□□□□ -0.16
SIN3B-210ENST00000599880 ABCC4O15439 1325 aa14.08□□□□□ -0.16
SIN3B-210ENST00000599880 POTECB2RU33 542 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
SIN3B-210ENST00000599880 HCLS1P14317 486 aaPredicted RBP14.07□□□□□ -0.16
SIN3B-210ENST00000599880 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 SYNE4Q8N205 404 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 TSPYL6Q8N831 410 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 L3MBTL3Q96JM7 780 aaPredicted RBP14.07□□□□□ -0.16
SIN3B-210ENST00000599880 TMX4Q9H1E5 349 aaPredicted RBP14.07□□□□□ -0.16
SIN3B-210ENST00000599880 ATP6V0A2Q9Y487 856 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 COL4A5P29400 1685 aa14.07□□□□□ -0.16
SIN3B-210ENST00000599880 ATP5J2-PTCD1G3V325 749 aa14.06□□□□□ -0.16
SIN3B-210ENST00000599880 FZD9O00144 591 aa14.06□□□□□ -0.16
SIN3B-210ENST00000599880 BBOX1O75936 387 aa14.06□□□□□ -0.16
SIN3B-210ENST00000599880 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
SIN3B-210ENST00000599880 DDX46Q7L014 1031 aaKnown RBP14.06□□□□□ -0.16
SIN3B-210ENST00000599880 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
SIN3B-210ENST00000599880 STK31Q9BXU1 1019 aa14.06□□□□□ -0.16
SIN3B-210ENST00000599880 VPS33BQ9H267 617 aa14.06□□□□□ -0.16
SIN3B-210ENST00000599880 LTBP1Q14766 1721 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 ADAMTSL1Q8N6G6 1762 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 IQCA1LA6NCM1 817 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 DDNO94850 711 aaPredicted RBP14.05□□□□□ -0.16
SIN3B-210ENST00000599880 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
SIN3B-210ENST00000599880 GRAPQ13588 217 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 SF3B3Q15393 1217 aaKnown RBP14.05□□□□□ -0.16
SIN3B-210ENST00000599880 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 GRAPLQ8TC17 118 aaPredicted RBP14.05□□□□□ -0.16
SIN3B-210ENST00000599880 JDP2Q8WYK2 163 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 FAM89AQ96GI7 184 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
SIN3B-210ENST00000599880 SP8Q8IXZ3 490 aa14.04□□□□□ -0.16
SIN3B-210ENST00000599880 ZBTB38Q8NAP3 1195 aaPredicted RBP14.04□□□□□ -0.16
SIN3B-210ENST00000599880 METTL22Q9BUU2 404 aaPredicted RBP14.04□□□□□ -0.16
SIN3B-210ENST00000599880 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
SIN3B-210ENST00000599880 ZNF541Q9H0D2 1346 aa14.04□□□□□ -0.16
SIN3B-210ENST00000599880 IRS4O14654 1257 aaPredicted RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms