RNA–Protein interactions for RNA: ENST00000599839.5

CALM3-212, Transcript of calmodulin 3, humanhuman

TSL 1 (best) BASIC

Gene CALM3, Length 1,355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-212ENST00000599839 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
CALM3-212ENST00000599839 SMC4Q9NTJ3 1288 aa20.12■□□□□ 0.81
CALM3-212ENST00000599839 ARFGEF1Q9Y6D6 1849 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 UTRNP46939 3433 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 NPHP1O15259 732 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 IGKV5-2P06315 115 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 KCNA3P22001 575 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 RARSP54136 660 aaKnown RBP20.11■□□□□ 0.81
CALM3-212ENST00000599839 ST5P78524 1137 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 TPTE2Q6XPS3 522 aa20.11■□□□□ 0.81
CALM3-212ENST00000599839 TGFB2P61812 414 aa20.1■□□□□ 0.81
CALM3-212ENST00000599839 RIC1Q4ADV7 1423 aa20.09■□□□□ 0.81
CALM3-212ENST00000599839 CWF19L2Q2TBE0 894 aaKnown RBP20.09■□□□□ 0.81
CALM3-212ENST00000599839 C3orf67Q6ZVT6 689 aa20.09■□□□□ 0.81
CALM3-212ENST00000599839 DNAAF4Q8WXU2 420 aa20.09■□□□□ 0.81
CALM3-212ENST00000599839 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
CALM3-212ENST00000599839 BRIP1Q9BX63 1249 aa20.09■□□□□ 0.81
CALM3-212ENST00000599839 NYXQ9GZU5 481 aa20.09■□□□□ 0.81
CALM3-212ENST00000599839 TAF1P21675 1872 aa20.09■□□□□ 0.81
CALM3-212ENST00000599839 PPP1R42Q7Z4L9 355 aa20.08■□□□□ 0.81
CALM3-212ENST00000599839 MYH3P11055 1940 aa20.08■□□□□ 0.8
CALM3-212ENST00000599839 SLX4Q8IY92 1834 aa20.08■□□□□ 0.8
CALM3-212ENST00000599839 YBX3P16989 372 aaKnown RBP eCLIP20.08■□□□□ 0.81e-19■□□□□ 8.1
CALM3-212ENST00000599839 GTF2E1P29083 439 aaPredicted RBP20.08■□□□□ 0.8
CALM3-212ENST00000599839 TRIM28Q13263 835 aaKnown RBP20.08■□□□□ 0.8
CALM3-212ENST00000599839 C2CD5Q86YS7 1000 aa20.08■□□□□ 0.8
CALM3-212ENST00000599839 COL4A1P02462 1669 aa20.07■□□□□ 0.8
CALM3-212ENST00000599839 NEURL1BA8MQ27 555 aa20.07■□□□□ 0.8
CALM3-212ENST00000599839 BCAR3O75815 825 aa20.07■□□□□ 0.8
CALM3-212ENST00000599839 RTL5Q5HYW3 569 aaPredicted RBP20.07■□□□□ 0.8
CALM3-212ENST00000599839 JARID2Q92833 1246 aaPredicted RBP20.07■□□□□ 0.8
CALM3-212ENST00000599839 FAM89AQ96GI7 184 aa20.07■□□□□ 0.8
CALM3-212ENST00000599839 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
CALM3-212ENST00000599839 SH3TC1Q8TE82 1336 aa20.06■□□□□ 0.8
CALM3-212ENST00000599839 PDE6BP35913 854 aa20.06■□□□□ 0.8
CALM3-212ENST00000599839 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
CALM3-212ENST00000599839 CCDC191Q8NCU4 936 aa20.06■□□□□ 0.8
CALM3-212ENST00000599839 PTPRCP08575 1304 aa20.05■□□□□ 0.8
CALM3-212ENST00000599839 RNF123Q5XPI4 1314 aa20.05■□□□□ 0.8
CALM3-212ENST00000599839 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
CALM3-212ENST00000599839 HCLS1P14317 486 aaPredicted RBP20.05■□□□□ 0.8
CALM3-212ENST00000599839 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
CALM3-212ENST00000599839 BEND3Q5T5X7 828 aa20.05■□□□□ 0.8
CALM3-212ENST00000599839 CWC25Q9NXE8 425 aaPredicted RBP20.05■□□□□ 0.8
CALM3-212ENST00000599839 NOB1Q9ULX3 412 aaKnown RBP20.05■□□□□ 0.8
CALM3-212ENST00000599839 SRGNP10124 158 aa20.04■□□□□ 0.8
CALM3-212ENST00000599839 NEXNQ0ZGT2 675 aa20.04■□□□□ 0.8
CALM3-212ENST00000599839 H0YIN7 160 aa20.03■□□□□ 0.8
CALM3-212ENST00000599839 SLC10A5Q5PT55 438 aa20.03■□□□□ 0.8
CALM3-212ENST00000599839 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
CALM3-212ENST00000599839 ZBTB38Q8NAP3 1195 aaPredicted RBP20.03■□□□□ 0.8
CALM3-212ENST00000599839 LINS1Q8NG48 757 aa20.03■□□□□ 0.8
CALM3-212ENST00000599839 TNNQ9UQP3 1299 aa20.03■□□□□ 0.8
CALM3-212ENST00000599839 CRY2Q49AN0 593 aa20.02■□□□□ 0.8
CALM3-212ENST00000599839 PIM2Q9P1W9 311 aa20.02■□□□□ 0.8
CALM3-212ENST00000599839 PCCAP05165 728 aaPredicted RBP20.01■□□□□ 0.79
CALM3-212ENST00000599839 GCKRQ14397 625 aa20.01■□□□□ 0.79
CALM3-212ENST00000599839 BCS1LQ9Y276 419 aa20.01■□□□□ 0.79
CALM3-212ENST00000599839 SPEF2Q9C093 1822 aa20■□□□□ 0.79
CALM3-212ENST00000599839 IRS4O14654 1257 aaPredicted RBP20■□□□□ 0.79
CALM3-212ENST00000599839 GPR162Q16538 588 aa20■□□□□ 0.79
CALM3-212ENST00000599839 SLC51AQ86UW1 340 aa20■□□□□ 0.79
CALM3-212ENST00000599839 ZNF622Q969S3 477 aaKnown RBP eCLIP20■□□□□ 0.79
CALM3-212ENST00000599839 KIF16BQ96L93 1317 aa20■□□□□ 0.79
CALM3-212ENST00000599839 CASP7P55210 303 aa19.99■□□□□ 0.79
CALM3-212ENST00000599839 MASTLQ96GX5 879 aa19.99■□□□□ 0.79
CALM3-212ENST00000599839 DALRD3Q5D0E6 543 aaKnown RBP19.98■□□□□ 0.79
CALM3-212ENST00000599839 STYK1Q6J9G0 422 aa19.98■□□□□ 0.79
CALM3-212ENST00000599839 UBE3BQ7Z3V4 1068 aa19.98■□□□□ 0.79
CALM3-212ENST00000599839 FER1L6Q2WGJ9 1857 aa19.98■□□□□ 0.79
CALM3-212ENST00000599839 CHD4Q14839 1912 aa19.98■□□□□ 0.79
CALM3-212ENST00000599839 CDHR2Q9BYE9 1310 aa19.98■□□□□ 0.79
CALM3-212ENST00000599839 H7C1W4 665 aa19.97■□□□□ 0.79
CALM3-212ENST00000599839 NPR1P16066 1061 aa19.97■□□□□ 0.79
CALM3-212ENST00000599839 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
CALM3-212ENST00000599839 NLRP3Q96P20 1036 aa19.97■□□□□ 0.79
CALM3-212ENST00000599839 SRCIN1Q9C0H9 1055 aa19.97■□□□□ 0.79
CALM3-212ENST00000599839 PDZRN3Q9UPQ7 1066 aa19.97■□□□□ 0.79
CALM3-212ENST00000599839 TRIM27P14373 513 aa19.96■□□□□ 0.79
CALM3-212ENST00000599839 PRPF40BQ6NWY9 871 aaKnown RBP19.96■□□□□ 0.79
CALM3-212ENST00000599839 TTLL6Q8N841 843 aa19.96■□□□□ 0.79
CALM3-212ENST00000599839 ABCC4O15439 1325 aa19.96■□□□□ 0.79
CALM3-212ENST00000599839 LRRC37AA6NMS7 1700 aa19.96■□□□□ 0.79
CALM3-212ENST00000599839 CCDC88AQ3V6T2 1871 aa19.96■□□□□ 0.79
CALM3-212ENST00000599839 RPGRQ92834 1020 aaKnown RBP19.95■□□□□ 0.79
CALM3-212ENST00000599839 API5Q9BZZ5 524 aaKnown RBP19.95■□□□□ 0.79
CALM3-212ENST00000599839 SBF1O95248 1867 aa19.95■□□□□ 0.78
CALM3-212ENST00000599839 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
CALM3-212ENST00000599839 HOXA10P31260 410 aaPredicted RBP19.95■□□□□ 0.78
CALM3-212ENST00000599839 ARHGAP45Q92619 1136 aa19.95■□□□□ 0.78
CALM3-212ENST00000599839 ZNF219Q9P2Y4 722 aaPredicted RBP19.95■□□□□ 0.78
CALM3-212ENST00000599839 GRM8O00222 908 aa19.94■□□□□ 0.78
CALM3-212ENST00000599839 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
CALM3-212ENST00000599839 OLFM4Q6UX06 510 aa19.94■□□□□ 0.78
CALM3-212ENST00000599839 ATF7IPQ6VMQ6 1270 aa19.94■□□□□ 0.78
CALM3-212ENST00000599839 CNKSR1Q969H4 720 aa19.94■□□□□ 0.78
CALM3-212ENST00000599839 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
CALM3-212ENST00000599839 PDE8AO60658 829 aa19.93■□□□□ 0.78
CALM3-212ENST00000599839 NBPF7P0C2Y1 421 aaPredicted RBP19.93■□□□□ 0.78
CALM3-212ENST00000599839 RCAN3Q9UKA8 241 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms