RNA–Protein interactions for RNA: ENST00000599825.2

LSP1P1-201, Transcript of LSP1 pseudogene 1, humanhuman

BASIC

Gene LSP1P1, Length 133 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P1-201ENST00000599825 CHADLQ6NUI6 762 aa13.32□□□□□ -0.28
LSP1P1-201ENST00000599825 RTKN2Q8IZC4 609 aa13.32□□□□□ -0.28
LSP1P1-201ENST00000599825 KLRG2A4D1S0 409 aaPredicted RBP13.31□□□□□ -0.28
LSP1P1-201ENST00000599825 NTSR2O95665 410 aa13.31□□□□□ -0.28
LSP1P1-201ENST00000599825 XAGE3Q8WTP9 111 aa13.31□□□□□ -0.28
LSP1P1-201ENST00000599825 RBM17Q96I25 401 aaKnown RBP13.31□□□□□ -0.28
LSP1P1-201ENST00000599825 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
LSP1P1-201ENST00000599825 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
LSP1P1-201ENST00000599825 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
LSP1P1-201ENST00000599825 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 HCLS1P14317 486 aaPredicted RBP13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 PDIA6Q15084 440 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 CRY2Q49AN0 593 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 PPP1R42Q7Z4L9 355 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 JDP2Q8WYK2 163 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 UTP14AQ9BVJ6 771 aaKnown RBP13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 TAF1DQ9H5J8 278 aaPredicted RBP13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 CHPF2Q9P2E5 772 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 ERBB4Q15303 1308 aa13.29□□□□□ -0.28
LSP1P1-201ENST00000599825 COL4A5P29400 1685 aa13.28□□□□□ -0.28
LSP1P1-201ENST00000599825 RGL2O15211 777 aa13.28□□□□□ -0.28
LSP1P1-201ENST00000599825 EPHX2P34913 555 aa13.28□□□□□ -0.28
LSP1P1-201ENST00000599825 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
LSP1P1-201ENST00000599825 COL13A1Q5TAT6 717 aaPredicted RBP13.28□□□□□ -0.28
LSP1P1-201ENST00000599825 RUNDC1Q96C34 613 aa13.28□□□□□ -0.28
LSP1P1-201ENST00000599825 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 AOC3Q16853 763 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 PARP10Q53GL7 1025 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 HDGFL1Q5TGJ6 251 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 MAP1SQ66K74 1059 aaPredicted RBP13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 LDHDQ86WU2 507 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 JMYQ8N9B5 988 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 NLRP3Q96P20 1036 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 TRMT112Q9UI30 125 aaKnown RBP13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 ADAMTS8Q9UP79 889 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 ABCC4O15439 1325 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 IBTKQ9P2D0 1353 aaPredicted RBP13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
LSP1P1-201ENST00000599825 RIC1Q4ADV7 1423 aa13.26□□□□□ -0.29
LSP1P1-201ENST00000599825 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
LSP1P1-201ENST00000599825 NIM1KQ8IY84 436 aa13.26□□□□□ -0.29
LSP1P1-201ENST00000599825 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
LSP1P1-201ENST00000599825 SCN4AP35499 1836 aa13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 ATP5J2-PTCD1G3V325 749 aa13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 LMOD1P29536 600 aaPredicted RBP13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 GRM1Q13255 1194 aa13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 NLRP10Q86W26 655 aa13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 L3MBTL3Q96JM7 780 aaPredicted RBP13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 PSMD1Q99460 953 aa13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 LAMB2P55268 1798 aa13.25□□□□□ -0.29
LSP1P1-201ENST00000599825 SNED1Q8TER0 1413 aa13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 FZD9O00144 591 aa13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 HOXA10P31260 410 aaPredicted RBP13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 PAXIP1Q6ZW49 1069 aaPredicted RBP13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 TNS4Q8IZW8 715 aa13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 CRAMP1Q96RY5 1269 aa13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 LTBP1Q14766 1721 aa13.24□□□□□ -0.29
LSP1P1-201ENST00000599825 CHL1O00533 1208 aa13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 FMR1Q06787 632 aaKnown RBP eCLIP13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 GPC2Q8N158 579 aa13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 DDX21Q9NR30 783 aaKnown RBP eCLIP13.23□□□□□ -0.29
LSP1P1-201ENST00000599825 SH3TC1Q8TE82 1336 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 APAF1O14727 1248 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 EPS15P42566 896 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 DDX46Q7L014 1031 aaKnown RBP13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 CNTROBQ8N137 903 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 ABT1Q9ULW3 272 aaKnown RBP13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 ATP6V0A2Q9Y487 856 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 TAF1P21675 1872 aa13.22□□□□□ -0.29
LSP1P1-201ENST00000599825 PASKQ96RG2 1323 aa13.21□□□□□ -0.29
LSP1P1-201ENST00000599825 TMEM88BA6NKF7 163 aa13.21□□□□□ -0.29
LSP1P1-201ENST00000599825 SCNN1DP51172 638 aa13.21□□□□□ -0.29
LSP1P1-201ENST00000599825 PNMA8AQ86V59 439 aaPredicted RBP13.21□□□□□ -0.29
LSP1P1-201ENST00000599825 FAM89AQ96GI7 184 aa13.21□□□□□ -0.29
LSP1P1-201ENST00000599825 PRKRIP1Q9H875 184 aaPredicted RBP13.21□□□□□ -0.29
LSP1P1-201ENST00000599825 CNTNAP1P78357 1384 aa13.2□□□□□ -0.3
LSP1P1-201ENST00000599825 RAD17O75943 681 aa13.2□□□□□ -0.3
LSP1P1-201ENST00000599825 MPNDQ8N594 471 aa13.2□□□□□ -0.3
LSP1P1-201ENST00000599825 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
LSP1P1-201ENST00000599825 DBF4Q9UBU7 674 aaPredicted RBP13.2□□□□□ -0.3
LSP1P1-201ENST00000599825 ADAMTSL1Q8N6G6 1762 aa13.2□□□□□ -0.3
LSP1P1-201ENST00000599825 DDX60Q8IY21 1712 aaKnown RBP13.19□□□□□ -0.3
LSP1P1-201ENST00000599825 TRAF5O00463 557 aa13.19□□□□□ -0.3
LSP1P1-201ENST00000599825 RIMBP2O15034 1052 aa13.19□□□□□ -0.3
LSP1P1-201ENST00000599825 ITGBL1O95965 494 aaPredicted RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms