RNA–Protein interactions for RNA: ENST00000599464.1

PRKD2-213, Transcript of protein kinase D2, humanhuman

TSL 2

Gene PRKD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-213ENST00000599464 DUSP27Q5VZP5 1158 aa12.19□□□□□ -0.46
PRKD2-213ENST00000599464 SMC1BQ8NDV3 1235 aa12.19□□□□□ -0.46
PRKD2-213ENST00000599464 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
PRKD2-213ENST00000599464 IFT57Q9NWB7 429 aa12.19□□□□□ -0.46
PRKD2-213ENST00000599464 RNF123Q5XPI4 1314 aa12.18□□□□□ -0.46
PRKD2-213ENST00000599464 CRY2Q49AN0 593 aa12.18□□□□□ -0.46
PRKD2-213ENST00000599464 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
PRKD2-213ENST00000599464 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
PRKD2-213ENST00000599464 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
PRKD2-213ENST00000599464 CACNA1SQ13698 1873 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 TCERG1O14776 1098 aaKnown RBP12.17□□□□□ -0.46
PRKD2-213ENST00000599464 PPEF1O14829 653 aaPredicted RBP12.17□□□□□ -0.46
PRKD2-213ENST00000599464 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 TCIRG1Q13488 830 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 CC2D2BQ6DHV5 1058 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 LRP10Q7Z4F1 713 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 PLBD2Q8NHP8 589 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 CHMP4AQ9BY43 222 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 MRS2Q9HD23 443 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 HYPKQ9NX55 129 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 ARFGEF2Q9Y6D5 1785 aa12.17□□□□□ -0.46
PRKD2-213ENST00000599464 SLX4Q8IY92 1834 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 ELL2O00472 640 aaPredicted RBP12.16□□□□□ -0.46
PRKD2-213ENST00000599464 DDNO94850 711 aaPredicted RBP12.16□□□□□ -0.46
PRKD2-213ENST00000599464 IARSP41252 1262 aaKnown RBP12.16□□□□□ -0.46
PRKD2-213ENST00000599464 GRIPAP1Q4V328 841 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 OLFM4Q6UX06 510 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 NLRP10Q86W26 655 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 C7orf43Q8WVR3 580 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 CRAMP1Q96RY5 1269 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 SBF1O95248 1867 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 NUP98P52948 1817 aa12.16□□□□□ -0.46
PRKD2-213ENST00000599464 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
PRKD2-213ENST00000599464 IQCA1LA6NCM1 817 aa12.15□□□□□ -0.46
PRKD2-213ENST00000599464 DDX46Q7L014 1031 aaKnown RBP12.15□□□□□ -0.46
PRKD2-213ENST00000599464 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
PRKD2-213ENST00000599464 HCLS1P14317 486 aaPredicted RBP12.14□□□□□ -0.47
PRKD2-213ENST00000599464 HOXA10P31260 410 aaPredicted RBP12.14□□□□□ -0.47
PRKD2-213ENST00000599464 EIF6P56537 245 aaKnown RBP12.14□□□□□ -0.47
PRKD2-213ENST00000599464 ZNF428Q96B54 188 aa12.14□□□□□ -0.47
PRKD2-213ENST00000599464 PSMD1Q99460 953 aa12.14□□□□□ -0.47
PRKD2-213ENST00000599464 ATP5J2-PTCD1G3V325 749 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 DDX58O95786 925 aaKnown RBP12.13□□□□□ -0.47
PRKD2-213ENST00000599464 ZNF853P0CG23 659 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 CCDC184Q52MB2 194 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 SLC10A5Q5PT55 438 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 CCDC30Q5VVM6 783 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 SUPT20HQ8NEM7 779 aa12.13□□□□□ -0.47
PRKD2-213ENST00000599464 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
PRKD2-213ENST00000599464 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
PRKD2-213ENST00000599464 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
PRKD2-213ENST00000599464 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
PRKD2-213ENST00000599464 STK31Q9BXU1 1019 aa12.12□□□□□ -0.47
PRKD2-213ENST00000599464 ABCC4O15439 1325 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 BBOX1O75936 387 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 LMOD1P29536 600 aaPredicted RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 EAPPQ56P03 285 aaPredicted RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 RTL5Q5HYW3 569 aaPredicted RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 MYD88Q99836 296 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 PHAXQ9H814 394 aaKnown RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 HACL1Q9UJ83 578 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 CLEC11AQ9Y240 323 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
PRKD2-213ENST00000599464 ATP6V0A2Q9Y487 856 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 GJA3Q9Y6H8 435 aa12.11□□□□□ -0.47
PRKD2-213ENST00000599464 ANKRD36CQ5JPF3 1778 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 POTECB2RU33 542 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 HTRA3P83110 453 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 GRAPQ13588 217 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 CCDC27Q2M243 656 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 CHADLQ6NUI6 762 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 WWC1Q8IX03 1113 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 GPC2Q8N158 579 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 MPNDQ8N594 471 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 GRAPLQ8TC17 118 aaPredicted RBP12.1□□□□□ -0.47
PRKD2-213ENST00000599464 ISCA1Q9BUE6 129 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 CCDC88AQ3V6T2 1871 aa12.1□□□□□ -0.47
PRKD2-213ENST00000599464 FZD9O00144 591 aa12.09□□□□□ -0.47
PRKD2-213ENST00000599464 IRS4O14654 1257 aaPredicted RBP12.09□□□□□ -0.47
PRKD2-213ENST00000599464 AOC3Q16853 763 aa12.09□□□□□ -0.47
PRKD2-213ENST00000599464 TMC4Q7Z404 712 aa12.09□□□□□ -0.47
PRKD2-213ENST00000599464 LDHDQ86WU2 507 aa12.09□□□□□ -0.47
PRKD2-213ENST00000599464 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
PRKD2-213ENST00000599464 DICER1Q9UPY3 1922 aaKnown RBP12.08□□□□□ -0.48
PRKD2-213ENST00000599464 NEXNQ0ZGT2 675 aa12.08□□□□□ -0.48
PRKD2-213ENST00000599464 TWISTNBQ3B726 338 aaPredicted RBP12.08□□□□□ -0.48
PRKD2-213ENST00000599464 PNMA8AQ86V59 439 aaPredicted RBP12.08□□□□□ -0.48
PRKD2-213ENST00000599464 SP8Q8IXZ3 490 aa12.08□□□□□ -0.48
PRKD2-213ENST00000599464 FAM9BQ8IZU0 186 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms