RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 ALDH1B1P30837 517 aa20.05■□□□□ 0.8
PRKD2-210ENST00000597641 IQCA1LA6NCM1 817 aa20.04■□□□□ 0.8
PRKD2-210ENST00000597641 NTSR2O95665 410 aa20.04■□□□□ 0.8
PRKD2-210ENST00000597641 EAPPQ56P03 285 aaPredicted RBP20.04■□□□□ 0.8
PRKD2-210ENST00000597641 TNS4Q8IZW8 715 aa20.04■□□□□ 0.8
PRKD2-210ENST00000597641 RIC1Q4ADV7 1423 aa20.03■□□□□ 0.8
PRKD2-210ENST00000597641 HOXA10P31260 410 aaPredicted RBP20.03■□□□□ 0.8
PRKD2-210ENST00000597641 KIF6Q6ZMV9 814 aa20.03■□□□□ 0.8
PRKD2-210ENST00000597641 PSMD1Q99460 953 aa20.03■□□□□ 0.8
PRKD2-210ENST00000597641 NYXQ9GZU5 481 aa20.03■□□□□ 0.8
PRKD2-210ENST00000597641 CNTNAP1P78357 1384 aa20.03■□□□□ 0.8
PRKD2-210ENST00000597641 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
PRKD2-210ENST00000597641 EPHX2P34913 555 aa20.02■□□□□ 0.8
PRKD2-210ENST00000597641 GIGYF2Q6Y7W6 1299 aaKnown RBP20.02■□□□□ 0.8
PRKD2-210ENST00000597641 HACL1Q9UJ83 578 aa20.02■□□□□ 0.8
PRKD2-210ENST00000597641 IBTKQ9P2D0 1353 aaPredicted RBP20.02■□□□□ 0.8
PRKD2-210ENST00000597641 NEFMP07197 916 aa20.01■□□□□ 0.79
PRKD2-210ENST00000597641 MAP1SQ66K74 1059 aaPredicted RBP20.01■□□□□ 0.79
PRKD2-210ENST00000597641 TSPYL4Q9UJ04 414 aa20.01■□□□□ 0.79
PRKD2-210ENST00000597641 EIF2S2P20042 333 aaKnown RBP20■□□□□ 0.79
PRKD2-210ENST00000597641 FMR1Q06787 632 aaKnown RBP eCLIP20■□□□□ 0.79
PRKD2-210ENST00000597641 MAPK8IP3Q9UPT6 1336 aa20■□□□□ 0.79
PRKD2-210ENST00000597641 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
PRKD2-210ENST00000597641 VEGFBP49765 207 aa19.99■□□□□ 0.79
PRKD2-210ENST00000597641 RIPK4P57078 832 aa19.99■□□□□ 0.79
PRKD2-210ENST00000597641 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
PRKD2-210ENST00000597641 RPGRQ92834 1020 aaKnown RBP19.99■□□□□ 0.79
PRKD2-210ENST00000597641 CLEC11AQ9Y240 323 aa19.99■□□□□ 0.79
PRKD2-210ENST00000597641 FOXN1O15353 648 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 GPC2Q8N158 579 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 NECTIN2Q92692 538 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 ZNF428Q96B54 188 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 CRAMP1Q96RY5 1269 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 GJA3Q9Y6H8 435 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 ERBB4Q15303 1308 aa19.98■□□□□ 0.79
PRKD2-210ENST00000597641 TMEM88BA6NKF7 163 aa19.97■□□□□ 0.79
PRKD2-210ENST00000597641 PPEF1O14829 653 aaPredicted RBP19.97■□□□□ 0.79
PRKD2-210ENST00000597641 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
PRKD2-210ENST00000597641 SCNN1DP51172 638 aa19.97■□□□□ 0.79
PRKD2-210ENST00000597641 CNTROBQ8N137 903 aa19.97■□□□□ 0.79
PRKD2-210ENST00000597641 DDX60Q8IY21 1712 aaKnown RBP19.96■□□□□ 0.79
PRKD2-210ENST00000597641 EPS15P42566 896 aa19.96■□□□□ 0.79
PRKD2-210ENST00000597641 COL4A1P02462 1669 aa19.96■□□□□ 0.79
PRKD2-210ENST00000597641 SLC10A5Q5PT55 438 aa19.95■□□□□ 0.78
PRKD2-210ENST00000597641 CC2D2BQ6DHV5 1058 aa19.95■□□□□ 0.78
PRKD2-210ENST00000597641 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
PRKD2-210ENST00000597641 JDP2Q8WYK2 163 aa19.95■□□□□ 0.78
PRKD2-210ENST00000597641 RBM17Q96I25 401 aaKnown RBP19.95■□□□□ 0.78
PRKD2-210ENST00000597641 ABCC4O15439 1325 aa19.95■□□□□ 0.78
PRKD2-210ENST00000597641 COPS6Q7L5N1 327 aa19.94■□□□□ 0.78
PRKD2-210ENST00000597641 LARGE2Q8N3Y3 721 aa19.94■□□□□ 0.78
PRKD2-210ENST00000597641 HCLS1P14317 486 aaPredicted RBP19.93■□□□□ 0.78
PRKD2-210ENST00000597641 EIF6P56537 245 aaKnown RBP19.93■□□□□ 0.78
PRKD2-210ENST00000597641 AOC3Q16853 763 aa19.93■□□□□ 0.78
PRKD2-210ENST00000597641 PARP10Q53GL7 1025 aa19.93■□□□□ 0.78
PRKD2-210ENST00000597641 PPP1R42Q7Z4L9 355 aa19.93■□□□□ 0.78
PRKD2-210ENST00000597641 PNMA8AQ86V59 439 aaPredicted RBP19.93■□□□□ 0.78
PRKD2-210ENST00000597641 XAGE3Q8WTP9 111 aa19.93■□□□□ 0.78
PRKD2-210ENST00000597641 UTP14AQ9BVJ6 771 aaKnown RBP19.93■□□□□ 0.78
PRKD2-210ENST00000597641 POLR2AP24928 1970 aaKnown RBP19.93■□□□□ 0.78
PRKD2-210ENST00000597641 AIMP1Q12904 312 aaKnown RBP19.92■□□□□ 0.78
PRKD2-210ENST00000597641 NEUROD2Q15784 382 aa19.92■□□□□ 0.78
PRKD2-210ENST00000597641 NLRP10Q86W26 655 aa19.92■□□□□ 0.78
PRKD2-210ENST00000597641 NLRP3Q96P20 1036 aa19.92■□□□□ 0.78
PRKD2-210ENST00000597641 PNNQ9H307 717 aaKnown RBP19.92■□□□□ 0.78
PRKD2-210ENST00000597641 TRIM35Q9UPQ4 493 aa19.92■□□□□ 0.78
PRKD2-210ENST00000597641 ATP6V0A2Q9Y487 856 aa19.92■□□□□ 0.78
PRKD2-210ENST00000597641 DUOX1Q9NRD9 1551 aa19.91■□□□□ 0.78
PRKD2-210ENST00000597641 RASSF10A6NK89 507 aa19.9■□□□□ 0.78
PRKD2-210ENST00000597641 TRAF5O00463 557 aa19.9■□□□□ 0.78
PRKD2-210ENST00000597641 PPIP5K2O43314 1243 aa19.9■□□□□ 0.78
PRKD2-210ENST00000597641 RALBP1Q15311 655 aa19.9■□□□□ 0.78
PRKD2-210ENST00000597641 DDX21Q9NR30 783 aaKnown RBP eCLIP19.9■□□□□ 0.78
PRKD2-210ENST00000597641 LRRC37AA6NMS7 1700 aa19.9■□□□□ 0.78
PRKD2-210ENST00000597641 CHL1O00533 1208 aa19.89■□□□□ 0.77
PRKD2-210ENST00000597641 CXCL9Q07325 125 aa19.89■□□□□ 0.77
PRKD2-210ENST00000597641 NIM1KQ8IY84 436 aa19.89■□□□□ 0.77
PRKD2-210ENST00000597641 BABAM1Q9NWV8 329 aa19.89■□□□□ 0.77
PRKD2-210ENST00000597641 WBP1LQ9NX94 342 aa19.89■□□□□ 0.77
PRKD2-210ENST00000597641 DDX10Q13206 875 aaKnown RBP19.88■□□□□ 0.77
PRKD2-210ENST00000597641 TCIRG1Q13488 830 aa19.88■□□□□ 0.77
PRKD2-210ENST00000597641 DEFB115Q30KQ5 88 aa19.88■□□□□ 0.77
PRKD2-210ENST00000597641 CST9Q5W186 159 aa19.88■□□□□ 0.77
PRKD2-210ENST00000597641 RTFDC1Q9BY42 306 aaPredicted RBP19.88■□□□□ 0.77
PRKD2-210ENST00000597641 THSD7BQ9C0I4 1608 aa19.87■□□□□ 0.77
PRKD2-210ENST00000597641 LMOD1P29536 600 aaPredicted RBP19.87■□□□□ 0.77
PRKD2-210ENST00000597641 GRIPAP1Q4V328 841 aa19.87■□□□□ 0.77
PRKD2-210ENST00000597641 CHPF2Q9P2E5 772 aa19.87■□□□□ 0.77
PRKD2-210ENST00000597641 WDR33Q9C0J8 1336 aaKnown RBP19.86■□□□□ 0.77
PRKD2-210ENST00000597641 SHTN1A0MZ66 631 aa19.86■□□□□ 0.77
PRKD2-210ENST00000597641 GPRC5DQ9NZD1 345 aa19.86■□□□□ 0.77
PRKD2-210ENST00000597641 LAS1LQ9Y4W2 734 aaKnown RBP19.86■□□□□ 0.77
PRKD2-210ENST00000597641 LBX1P52954 281 aa19.85■□□□□ 0.77
PRKD2-210ENST00000597641 SP8Q8IXZ3 490 aa19.85■□□□□ 0.77
PRKD2-210ENST00000597641 PRDM10Q9NQV6 1147 aa19.85■□□□□ 0.77
PRKD2-210ENST00000597641 TRMT112Q9UI30 125 aaKnown RBP19.85■□□□□ 0.77
PRKD2-210ENST00000597641 ABT1Q9ULW3 272 aaKnown RBP19.85■□□□□ 0.77
PRKD2-210ENST00000597641 SCN9AQ15858 1988 aa19.84■□□□□ 0.77
PRKD2-210ENST00000597641 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
PRKD2-210ENST00000597641 YDJCA8MPS7 323 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms