RNA–Protein interactions for RNA: ENST00000594668.5

ZNF548-203, Transcript of zinc finger protein 548, humanhuman

TSL 5

Gene ZNF548, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-203ENST00000594668 NUTM1Q86Y26 1132 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 CCDC191Q8NCU4 936 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 LINS1Q8NG48 757 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 JARID2Q92833 1246 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-203ENST00000594668 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
ZNF548-203ENST00000594668 CWC25Q9NXE8 425 aaPredicted RBP11.78□□□□□ -0.52
ZNF548-203ENST00000594668 ABCC4O15439 1325 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 TAF1P21675 1872 aa11.78□□□□□ -0.52
ZNF548-203ENST00000594668 PXDNLA1KZ92 1463 aa11.77□□□□□ -0.52
ZNF548-203ENST00000594668 NTSR2O95665 410 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 GCKRQ14397 625 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 ERFEQ4G0M1 354 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 PRR5LQ6MZQ0 368 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 NBPF5PQ86XG9 351 aaPredicted RBP11.77□□□□□ -0.53
ZNF548-203ENST00000594668 SRCIN1Q9C0H9 1055 aa11.77□□□□□ -0.53
ZNF548-203ENST00000594668 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
ZNF548-203ENST00000594668 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 LRP5O75197 1615 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
ZNF548-203ENST00000594668 H7C1W4 665 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 ALDH1L1O75891 902 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
ZNF548-203ENST00000594668 C20orf194Q5TEA3 1177 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
ZNF548-203ENST00000594668 DZIP1LQ8IYY4 767 aaKnown RBP11.76□□□□□ -0.53
ZNF548-203ENST00000594668 TMEM57Q8N5G2 664 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 FAM89AQ96GI7 184 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 NYXQ9GZU5 481 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 SUPT16HQ9Y5B9 1047 aaKnown RBP11.76□□□□□ -0.53
ZNF548-203ENST00000594668 KIAA1551Q9HCM1 1747 aa11.76□□□□□ -0.53
ZNF548-203ENST00000594668 CCT4P50991 539 aaKnown RBP11.75□□□□□ -0.53
ZNF548-203ENST00000594668 RRP1P56182 461 aaKnown RBP11.75□□□□□ -0.53
ZNF548-203ENST00000594668 CNBD1Q8NA66 436 aa11.75□□□□□ -0.53
ZNF548-203ENST00000594668 ZBTB38Q8NAP3 1195 aaPredicted RBP11.75□□□□□ -0.53
ZNF548-203ENST00000594668 RNF123Q5XPI4 1314 aa11.75□□□□□ -0.53
ZNF548-203ENST00000594668 IBTKQ9P2D0 1353 aaPredicted RBP11.75□□□□□ -0.53
ZNF548-203ENST00000594668 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 PCCAP05165 728 aaPredicted RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 GTF2E1P29083 439 aaPredicted RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 CASP7P55210 303 aa11.74□□□□□ -0.53
ZNF548-203ENST00000594668 SLC10A5Q5PT55 438 aa11.74□□□□□ -0.53
ZNF548-203ENST00000594668 FTSJ3Q8IY81 847 aaKnown RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 USP44Q9H0E7 712 aa11.74□□□□□ -0.53
ZNF548-203ENST00000594668 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
ZNF548-203ENST00000594668 ABCC12Q96J65 1359 aa11.74□□□□□ -0.53
ZNF548-203ENST00000594668 DLEC1Q9Y238 1755 aa11.74□□□□□ -0.53
ZNF548-203ENST00000594668 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
ZNF548-203ENST00000594668 GRM8O00222 908 aa11.73□□□□□ -0.53
ZNF548-203ENST00000594668 NPHP1O15259 732 aa11.73□□□□□ -0.53
ZNF548-203ENST00000594668 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
ZNF548-203ENST00000594668 ST5P78524 1137 aa11.73□□□□□ -0.53
ZNF548-203ENST00000594668 C3orf67Q6ZVT6 689 aa11.73□□□□□ -0.53
ZNF548-203ENST00000594668 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
ZNF548-203ENST00000594668 UBE3BQ7Z3V4 1068 aa11.73□□□□□ -0.53
ZNF548-203ENST00000594668 C9orf78Q9NZ63 289 aaPredicted RBP11.73□□□□□ -0.53
ZNF548-203ENST00000594668 UTYO14607 1347 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 CDHR2Q9BYE9 1310 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 IRS4O14654 1257 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-203ENST00000594668 MS4A1P11836 297 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 PDE3AQ14432 1141 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 KLHL34Q8N239 644 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 BRIP1Q9BX63 1249 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 PPP1R1BQ9UD71 204 aaPredicted RBP11.72□□□□□ -0.53
ZNF548-203ENST00000594668 COG6Q9Y2V7 657 aa11.72□□□□□ -0.53
ZNF548-203ENST00000594668 ZBTB7BO15156 539 aaPredicted RBP11.71□□□□□ -0.53
ZNF548-203ENST00000594668 ITPRIPQ8IWB1 547 aa11.71□□□□□ -0.53
ZNF548-203ENST00000594668 KAZALD1Q96I82 304 aa11.71□□□□□ -0.53
ZNF548-203ENST00000594668 MEIS3Q99687 375 aa11.71□□□□□ -0.53
ZNF548-203ENST00000594668 FHDC1Q9C0D6 1143 aaPredicted RBP11.71□□□□□ -0.53
ZNF548-203ENST00000594668 CD2APQ9Y5K6 639 aa11.71□□□□□ -0.53
ZNF548-203ENST00000594668 SPEF2Q9C093 1822 aa11.71□□□□□ -0.54
ZNF548-203ENST00000594668 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 KLRG2A4D1S0 409 aaPredicted RBP11.7□□□□□ -0.54
ZNF548-203ENST00000594668 PDE8AO60658 829 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
ZNF548-203ENST00000594668 CHRNA5P30532 468 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 PDE6BP35913 854 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 FOXO4P98177 505 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 MVPQ14764 893 aaKnown RBP11.7□□□□□ -0.54
ZNF548-203ENST00000594668 EPHA10Q5JZY3 1008 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 NLGN2Q8NFZ4 835 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 SUCLG2Q96I99 432 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 NLRP3Q96P20 1036 aa11.7□□□□□ -0.54
ZNF548-203ENST00000594668 RIC1Q4ADV7 1423 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 COL4A1P02462 1669 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 DPEP1P16444 411 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 KCNA3P22001 575 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 TGFB2P61812 414 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 C2CD5Q86YS7 1000 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 PLA2G12BQ9BX93 195 aa11.69□□□□□ -0.54
ZNF548-203ENST00000594668 SRGNP10124 158 aa11.68□□□□□ -0.54
ZNF548-203ENST00000594668 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
ZNF548-203ENST00000594668 CRY2Q49AN0 593 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms