RNA–Protein interactions for RNA: ENST00000593932.1

SPTBN4-206, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best)

Gene SPTBN4, Length 1,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-206ENST00000593932 SMC1BQ8NDV3 1235 aa29.04■■■□□ 2.24
SPTBN4-206ENST00000593932 RPGRQ92834 1020 aaKnown RBP29.03■■■□□ 2.24
SPTBN4-206ENST00000593932 CFAP44Q96MT7 982 aa29.03■■■□□ 2.24
SPTBN4-206ENST00000593932 ZNF277Q9NRM2 450 aaPredicted RBP29.03■■■□□ 2.24
SPTBN4-206ENST00000593932 SNED1Q8TER0 1413 aa29.03■■■□□ 2.24
SPTBN4-206ENST00000593932 APAF1O14727 1248 aa29.02■■■□□ 2.24
SPTBN4-206ENST00000593932 HOXA10P31260 410 aaPredicted RBP29.02■■■□□ 2.24
SPTBN4-206ENST00000593932 CHPF2Q9P2E5 772 aa29.02■■■□□ 2.24
SPTBN4-206ENST00000593932 C3orf67Q6ZVT6 689 aa29.01■■■□□ 2.23
SPTBN4-206ENST00000593932 UTP14AQ9BVJ6 771 aaKnown RBP29.01■■■□□ 2.23
SPTBN4-206ENST00000593932 DDNO94850 711 aaPredicted RBP29■■■□□ 2.23
SPTBN4-206ENST00000593932 HOXB7P09629 217 aa29■■■□□ 2.23
SPTBN4-206ENST00000593932 HDGFL1Q5TGJ6 251 aa29■■■□□ 2.23
SPTBN4-206ENST00000593932 HSP90AB3PQ58FF7 597 aa28.99■■■□□ 2.23
SPTBN4-206ENST00000593932 DNAJC5GQ8N7S2 189 aa28.99■■■□□ 2.23
SPTBN4-206ENST00000593932 MBIPQ9NS73 344 aa28.99■■■□□ 2.23
SPTBN4-206ENST00000593932 HTRA3P83110 453 aa28.98■■■□□ 2.23
SPTBN4-206ENST00000593932 RBM17Q96I25 401 aaKnown RBP28.98■■■□□ 2.23
SPTBN4-206ENST00000593932 CRAMP1Q96RY5 1269 aa28.98■■■□□ 2.23
SPTBN4-206ENST00000593932 ZNF853P0CG23 659 aa28.97■■■□□ 2.23
SPTBN4-206ENST00000593932 SLC10A5Q5PT55 438 aa28.97■■■□□ 2.23
SPTBN4-206ENST00000593932 NLRP10Q86W26 655 aa28.97■■■□□ 2.23
SPTBN4-206ENST00000593932 SYNE4Q8N205 404 aa28.97■■■□□ 2.23
SPTBN4-206ENST00000593932 RNF123Q5XPI4 1314 aa28.96■■■□□ 2.23
SPTBN4-206ENST00000593932 IARSP41252 1262 aaKnown RBP28.96■■■□□ 2.23
SPTBN4-206ENST00000593932 TCIRG1Q13488 830 aa28.96■■■□□ 2.23
SPTBN4-206ENST00000593932 DUSP27Q5VZP5 1158 aa28.96■■■□□ 2.23
SPTBN4-206ENST00000593932 CC2D2BQ6DHV5 1058 aa28.96■■■□□ 2.23
SPTBN4-206ENST00000593932 NLRP3Q96P20 1036 aa28.96■■■□□ 2.23
SPTBN4-206ENST00000593932 ZEB1P37275 1124 aaPredicted RBP28.95■■■□□ 2.22
SPTBN4-206ENST00000593932 PSMD1Q99460 953 aa28.95■■■□□ 2.22
SPTBN4-206ENST00000593932 DBF4Q9UBU7 674 aaPredicted RBP28.95■■■□□ 2.22
SPTBN4-206ENST00000593932 LAMB2P55268 1798 aa28.95■■■□□ 2.22
SPTBN4-206ENST00000593932 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
SPTBN4-206ENST00000593932 CCDC184Q52MB2 194 aa28.94■■■□□ 2.22
SPTBN4-206ENST00000593932 SLC51AQ86UW1 340 aa28.94■■■□□ 2.22
SPTBN4-206ENST00000593932 IFT57Q9NWB7 429 aa28.94■■■□□ 2.22
SPTBN4-206ENST00000593932 PPEF1O14829 653 aaPredicted RBP28.93■■■□□ 2.22
SPTBN4-206ENST00000593932 GNAI1P63096 354 aa28.92■■■□□ 2.22
SPTBN4-206ENST00000593932 CALD1Q05682 793 aaKnown RBP28.92■■■□□ 2.22
SPTBN4-206ENST00000593932 PLBD2Q8NHP8 589 aa28.92■■■□□ 2.22
SPTBN4-206ENST00000593932 L3MBTL3Q96JM7 780 aaPredicted RBP28.92■■■□□ 2.22
SPTBN4-206ENST00000593932 TCERG1O14776 1098 aaKnown RBP28.91■■■□□ 2.22
SPTBN4-206ENST00000593932 TRMT112Q9UI30 125 aaKnown RBP28.91■■■□□ 2.22
SPTBN4-206ENST00000593932 SCN4AP35499 1836 aa28.91■■■□□ 2.22
SPTBN4-206ENST00000593932 COL4A5P29400 1685 aa28.9■■■□□ 2.22
SPTBN4-206ENST00000593932 HCLS1P14317 486 aaPredicted RBP28.9■■■□□ 2.22
SPTBN4-206ENST00000593932 ANKRD13DQ6ZTN6 518 aa28.9■■■□□ 2.22
SPTBN4-206ENST00000593932 HYPKQ9NX55 129 aa28.9■■■□□ 2.22
SPTBN4-206ENST00000593932 ABCC4O15439 1325 aa28.9■■■□□ 2.22
SPTBN4-206ENST00000593932 FZD9O00144 591 aa28.89■■■□□ 2.22
SPTBN4-206ENST00000593932 GRIPAP1Q4V328 841 aa28.89■■■□□ 2.22
SPTBN4-206ENST00000593932 SH3TC1Q8TE82 1336 aa28.89■■■□□ 2.21
SPTBN4-206ENST00000593932 IQCA1LA6NCM1 817 aa28.88■■■□□ 2.21
SPTBN4-206ENST00000593932 POTEIP0CG38 1075 aa28.88■■■□□ 2.21
SPTBN4-206ENST00000593932 POTEJP0CG39 1038 aa28.88■■■□□ 2.21
SPTBN4-206ENST00000593932 ZNF428Q96B54 188 aa28.88■■■□□ 2.21
SPTBN4-206ENST00000593932 KLRG1Q96E93 195 aa28.87■■■□□ 2.21
SPTBN4-206ENST00000593932 ISCA1Q9BUE6 129 aa28.87■■■□□ 2.21
SPTBN4-206ENST00000593932 DDX60Q8IY21 1712 aaKnown RBP28.86■■■□□ 2.21
SPTBN4-206ENST00000593932 ELL2O00472 640 aaPredicted RBP28.86■■■□□ 2.21
SPTBN4-206ENST00000593932 CHADLQ6NUI6 762 aa28.86■■■□□ 2.21
SPTBN4-206ENST00000593932 JDP2Q8WYK2 163 aa28.86■■■□□ 2.21
SPTBN4-206ENST00000593932 TAF1DQ9H5J8 278 aaPredicted RBP28.86■■■□□ 2.21
SPTBN4-206ENST00000593932 ATP6V0A2Q9Y487 856 aa28.86■■■□□ 2.21
SPTBN4-206ENST00000593932 ATP5J2-PTCD1G3V325 749 aa28.84■■■□□ 2.21
SPTBN4-206ENST00000593932 LARGE2Q8N3Y3 721 aa28.83■■■□□ 2.21
SPTBN4-206ENST00000593932 C8orf58Q8NAV2 365 aa28.83■■■□□ 2.21
SPTBN4-206ENST00000593932 GPC2Q8N158 579 aa28.82■■■□□ 2.2
SPTBN4-206ENST00000593932 TMX4Q9H1E5 349 aaPredicted RBP28.82■■■□□ 2.2
SPTBN4-206ENST00000593932 PHAXQ9H814 394 aaKnown RBP28.82■■■□□ 2.2
SPTBN4-206ENST00000593932 HACL1Q9UJ83 578 aa28.82■■■□□ 2.2
SPTBN4-206ENST00000593932 TAF1P21675 1872 aa28.82■■■□□ 2.2
SPTBN4-206ENST00000593932 BBOX1O75936 387 aa28.81■■■□□ 2.2
SPTBN4-206ENST00000593932 DDX46Q7L014 1031 aaKnown RBP28.81■■■□□ 2.2
SPTBN4-206ENST00000593932 FAM89AQ96GI7 184 aa28.81■■■□□ 2.2
SPTBN4-206ENST00000593932 ZNF316A6NFI3 1004 aaPredicted RBP28.8■■■□□ 2.2
SPTBN4-206ENST00000593932 EIF6P56537 245 aaKnown RBP28.8■■■□□ 2.2
SPTBN4-206ENST00000593932 LDHDQ86WU2 507 aa28.8■■■□□ 2.2
SPTBN4-206ENST00000593932 GOLGA2Q08379 1002 aa28.79■■■□□ 2.2
SPTBN4-206ENST00000593932 GRAPQ13588 217 aa28.79■■■□□ 2.2
SPTBN4-206ENST00000593932 SP8Q8IXZ3 490 aa28.79■■■□□ 2.2
SPTBN4-206ENST00000593932 JMYQ8N9B5 988 aa28.79■■■□□ 2.2
SPTBN4-206ENST00000593932 GRAPLQ8TC17 118 aaPredicted RBP28.79■■■□□ 2.2
SPTBN4-206ENST00000593932 ADAMTSL1Q8N6G6 1762 aa28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 PPIP5K2O43314 1243 aa28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 EPHX2P34913 555 aa28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 TRIM28Q13263 835 aaKnown RBP28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 EAPPQ56P03 285 aaPredicted RBP28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 RIC3Q7Z5B4 369 aa28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 GJA3Q9Y6H8 435 aa28.78■■■□□ 2.2
SPTBN4-206ENST00000593932 AOC3Q16853 763 aa28.77■■■□□ 2.2
SPTBN4-206ENST00000593932 CCDC27Q2M243 656 aa28.77■■■□□ 2.2
SPTBN4-206ENST00000593932 NIM1KQ8IY84 436 aa28.77■■■□□ 2.2
SPTBN4-206ENST00000593932 TSR2Q969E8 191 aaKnown RBP28.77■■■□□ 2.2
SPTBN4-206ENST00000593932 RTFDC1Q9BY42 306 aaPredicted RBP28.77■■■□□ 2.2
SPTBN4-206ENST00000593932 MRS2Q9HD23 443 aa28.77■■■□□ 2.2
SPTBN4-206ENST00000593932 RTL5Q5HYW3 569 aaPredicted RBP28.76■■■□□ 2.19
SPTBN4-206ENST00000593932 DPP8Q6V1X1 898 aaPredicted RBP28.76■■■□□ 2.19
SPTBN4-206ENST00000593932 TSPYL6Q8N831 410 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms