RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SNED1Q8TER0 1413 aa26.2■■□□□ 1.78
CIRBP-239ENST00000592467 ZC3H4Q9UPT8 1303 aaKnown RBP26.19■■□□□ 1.78
CIRBP-239ENST00000592467 PPP1R42Q7Z4L9 355 aa26.19■■□□□ 1.78
CIRBP-239ENST00000592467 NLRP10Q86W26 655 aa26.19■■□□□ 1.78
CIRBP-239ENST00000592467 NMRK2Q9NPI5 230 aa26.19■■□□□ 1.78
CIRBP-239ENST00000592467 ELL2O00472 640 aaPredicted RBP26.18■■□□□ 1.78
CIRBP-239ENST00000592467 SLC10A5Q5PT55 438 aa26.18■■□□□ 1.78
CIRBP-239ENST00000592467 TSPYL6Q8N831 410 aa26.18■■□□□ 1.78
CIRBP-239ENST00000592467 PLBD2Q8NHP8 589 aa26.18■■□□□ 1.78
CIRBP-239ENST00000592467 HOXA10P31260 410 aaPredicted RBP26.17■■□□□ 1.78
CIRBP-239ENST00000592467 HSP90AB3PQ58FF7 597 aa26.17■■□□□ 1.78
CIRBP-239ENST00000592467 TSR2Q969E8 191 aaKnown RBP26.17■■□□□ 1.78
CIRBP-239ENST00000592467 HYPKQ9NX55 129 aa26.17■■□□□ 1.78
CIRBP-239ENST00000592467 OLFM4Q6UX06 510 aa26.16■■□□□ 1.78
CIRBP-239ENST00000592467 UTP14AQ9BVJ6 771 aaKnown RBP26.16■■□□□ 1.78
CIRBP-239ENST00000592467 IL16Q14005 1332 aa26.15■■□□□ 1.78
CIRBP-239ENST00000592467 DDX60Q8IY21 1712 aaKnown RBP26.15■■□□□ 1.78
CIRBP-239ENST00000592467 SOGA3Q5TF21 947 aa26.15■■□□□ 1.78
CIRBP-239ENST00000592467 ANKRD13DQ6ZTN6 518 aa26.15■■□□□ 1.78
CIRBP-239ENST00000592467 RNF123Q5XPI4 1314 aa26.14■■□□□ 1.78
CIRBP-239ENST00000592467 ALDH1B1P30837 517 aa26.14■■□□□ 1.78
CIRBP-239ENST00000592467 SYNE4Q8N205 404 aa26.14■■□□□ 1.78
CIRBP-239ENST00000592467 ISCA1Q9BUE6 129 aa26.14■■□□□ 1.78
CIRBP-239ENST00000592467 TAOK3Q9H2K8 898 aa26.14■■□□□ 1.78
CIRBP-239ENST00000592467 PHAXQ9H814 394 aaKnown RBP26.14■■□□□ 1.78
CIRBP-239ENST00000592467 CCDC93Q567U6 631 aa26.13■■□□□ 1.77
CIRBP-239ENST00000592467 SLC51AQ86UW1 340 aa26.12■■□□□ 1.77
CIRBP-239ENST00000592467 CRAMP1Q96RY5 1269 aa26.11■■□□□ 1.77
CIRBP-239ENST00000592467 KDM2BQ8NHM5 1336 aa26.11■■□□□ 1.77
CIRBP-239ENST00000592467 GLTPD2A6NH11 291 aa26.1■■□□□ 1.77
CIRBP-239ENST00000592467 FKBP4Q02790 459 aaKnown RBP eCLIP26.09■■□□□ 1.77
CIRBP-239ENST00000592467 RPGRQ92834 1020 aaKnown RBP26.09■■□□□ 1.77
CIRBP-239ENST00000592467 NLRP3Q96P20 1036 aa26.09■■□□□ 1.77
CIRBP-239ENST00000592467 WDR90Q96KV7 1748 aa26.08■■□□□ 1.77
CIRBP-239ENST00000592467 TRIM28Q13263 835 aaKnown RBP26.08■■□□□ 1.77
CIRBP-239ENST00000592467 WDR63Q8IWG1 891 aa26.08■■□□□ 1.77
CIRBP-239ENST00000592467 FAM9BQ8IZU0 186 aa26.08■■□□□ 1.77
CIRBP-239ENST00000592467 TRMT112Q9UI30 125 aaKnown RBP26.08■■□□□ 1.77
CIRBP-239ENST00000592467 TAF1P21675 1872 aa26.08■■□□□ 1.77
CIRBP-239ENST00000592467 SH3TC1Q8TE82 1336 aa26.08■■□□□ 1.77
CIRBP-239ENST00000592467 ATP5J2-PTCD1G3V325 749 aa26.07■■□□□ 1.76
CIRBP-239ENST00000592467 HCLS1P14317 486 aaPredicted RBP26.07■■□□□ 1.76
CIRBP-239ENST00000592467 CCDC30Q5VVM6 783 aa26.07■■□□□ 1.76
CIRBP-239ENST00000592467 ZNF428Q96B54 188 aa26.07■■□□□ 1.76
CIRBP-239ENST00000592467 RBM17Q96I25 401 aaKnown RBP26.07■■□□□ 1.76
CIRBP-239ENST00000592467 RRAGCQ9HB90 399 aa26.07■■□□□ 1.76
CIRBP-239ENST00000592467 SALL2Q9Y467 1007 aaPredicted RBP26.07■■□□□ 1.76
CIRBP-239ENST00000592467 FANCIQ9NVI1 1328 aa26.07■■□□□ 1.76
CIRBP-239ENST00000592467 TOMM70O94826 608 aa26.06■■□□□ 1.76
CIRBP-239ENST00000592467 RTKN2Q8IZC4 609 aa26.06■■□□□ 1.76
CIRBP-239ENST00000592467 SPINK5Q9NQ38 1064 aaPredicted RBP26.06■■□□□ 1.76
CIRBP-239ENST00000592467 CEP350Q5VT06 3117 aa26.05■■□□□ 1.76
CIRBP-239ENST00000592467 POTECB2RU33 542 aa26.05■■□□□ 1.76
CIRBP-239ENST00000592467 TWISTNBQ3B726 338 aaPredicted RBP26.05■■□□□ 1.76
CIRBP-239ENST00000592467 ABCC4O15439 1325 aa26.05■■□□□ 1.76
CIRBP-239ENST00000592467 COL4A5P29400 1685 aa26.04■■□□□ 1.76
CIRBP-239ENST00000592467 ZNF277Q9NRM2 450 aaPredicted RBP26.04■■□□□ 1.76
CIRBP-239ENST00000592467 COL4A1P02462 1669 aa26.03■■□□□ 1.76
CIRBP-239ENST00000592467 GOLGA2Q08379 1002 aa26.03■■□□□ 1.76
CIRBP-239ENST00000592467 RIC3Q7Z5B4 369 aa26.03■■□□□ 1.76
CIRBP-239ENST00000592467 FAM89AQ96GI7 184 aa26.03■■□□□ 1.76
CIRBP-239ENST00000592467 PSMD1Q99460 953 aa26.03■■□□□ 1.76
CIRBP-239ENST00000592467 PPEF1O14829 653 aaPredicted RBP26.02■■□□□ 1.76
CIRBP-239ENST00000592467 CC2D2BQ6DHV5 1058 aa26.02■■□□□ 1.76
CIRBP-239ENST00000592467 CHMP4AQ9BY43 222 aa26.02■■□□□ 1.76
CIRBP-239ENST00000592467 TCERG1O14776 1098 aaKnown RBP26.01■■□□□ 1.75
CIRBP-239ENST00000592467 CACNA1FO60840 1977 aa26.01■■□□□ 1.75
CIRBP-239ENST00000592467 ZNF521Q96K83 1311 aa26.01■■□□□ 1.75
CIRBP-239ENST00000592467 HSPA6P17066 643 aa26■■□□□ 1.75
CIRBP-239ENST00000592467 G2E3Q7L622 706 aa26■■□□□ 1.75
CIRBP-239ENST00000592467 RBM46Q8TBY0 533 aaKnown RBP26■■□□□ 1.75
CIRBP-239ENST00000592467 LRRC37AA6NMS7 1700 aa26■■□□□ 1.75
CIRBP-239ENST00000592467 VAMP4O75379 141 aa25.99■■□□□ 1.75
CIRBP-239ENST00000592467 IARSP41252 1262 aaKnown RBP25.99■■□□□ 1.75
CIRBP-239ENST00000592467 MYD88Q99836 296 aa25.99■■□□□ 1.75
CIRBP-239ENST00000592467 METTL22Q9BUU2 404 aaPredicted RBP25.99■■□□□ 1.75
CIRBP-239ENST00000592467 ATP6V0A2Q9Y487 856 aa25.99■■□□□ 1.75
CIRBP-239ENST00000592467 SF3B3Q15393 1217 aaKnown RBP25.98■■□□□ 1.75
CIRBP-239ENST00000592467 DDNO94850 711 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-239ENST00000592467 VEGFAP15692 232 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-239ENST00000592467 EXOSC9Q06265 439 aaKnown RBP25.97■■□□□ 1.75
CIRBP-239ENST00000592467 GRIPAP1Q4V328 841 aa25.97■■□□□ 1.75
CIRBP-239ENST00000592467 DPY19L2Q6NUT2 758 aa25.97■■□□□ 1.75
CIRBP-239ENST00000592467 KSR2Q6VAB6 950 aa25.97■■□□□ 1.75
CIRBP-239ENST00000592467 ZNF541Q9H0D2 1346 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 PI4KAP2A4QPH2 592 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 GRAPQ13588 217 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 RTL5Q5HYW3 569 aaPredicted RBP25.96■■□□□ 1.75
CIRBP-239ENST00000592467 PI4KAP1Q8N8J0 262 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 ZBTB38Q8NAP3 1195 aaPredicted RBP25.96■■□□□ 1.75
CIRBP-239ENST00000592467 CCDC191Q8NCU4 936 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 GRAPLQ8TC17 118 aaPredicted RBP25.96■■□□□ 1.75
CIRBP-239ENST00000592467 STK31Q9BXU1 1019 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 MAP3K2Q9Y2U5 619 aa25.96■■□□□ 1.75
CIRBP-239ENST00000592467 FZD9O00144 591 aa25.95■■□□□ 1.74
CIRBP-239ENST00000592467 IRS4O14654 1257 aaPredicted RBP25.95■■□□□ 1.74
CIRBP-239ENST00000592467 BBOX1O75936 387 aa25.95■■□□□ 1.74
CIRBP-239ENST00000592467 DDX58O95786 925 aaKnown RBP25.95■■□□□ 1.74
CIRBP-239ENST00000592467 SLC4A2P04920 1241 aa25.95■■□□□ 1.74
CIRBP-239ENST00000592467 IGKV5-2P06315 115 aa25.95■■□□□ 1.74
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