RNA–Protein interactions for RNA: ENST00000591880.2

GFAP-220, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-220ENST00000591880 ERFEQ4G0M1 354 aa14.29□□□□□ -0.12
GFAP-220ENST00000591880 ANKRD13DQ6ZTN6 518 aa14.29□□□□□ -0.12
GFAP-220ENST00000591880 FAM9BQ8IZU0 186 aa14.29□□□□□ -0.12
GFAP-220ENST00000591880 NLRP3Q96P20 1036 aa14.29□□□□□ -0.12
GFAP-220ENST00000591880 KDM2BQ8NHM5 1336 aa14.29□□□□□ -0.12
GFAP-220ENST00000591880 C1QTNF8P60827 252 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 CACNA1SQ13698 1873 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 NLRP10Q86W26 655 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 TIAM2Q8IVF5 1701 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 SH3TC1Q8TE82 1336 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
GFAP-220ENST00000591880 STK31Q9BXU1 1019 aa14.28□□□□□ -0.12
GFAP-220ENST00000591880 FER1L6Q2WGJ9 1857 aa14.27□□□□□ -0.12
GFAP-220ENST00000591880 TWISTNBQ3B726 338 aaPredicted RBP14.27□□□□□ -0.13
GFAP-220ENST00000591880 CC2D2BQ6DHV5 1058 aa14.27□□□□□ -0.13
GFAP-220ENST00000591880 RTKN2Q8IZC4 609 aa14.27□□□□□ -0.13
GFAP-220ENST00000591880 C8orf58Q8NAV2 365 aa14.27□□□□□ -0.13
GFAP-220ENST00000591880 TSR2Q969E8 191 aaKnown RBP14.27□□□□□ -0.13
GFAP-220ENST00000591880 RBM17Q96I25 401 aaKnown RBP14.27□□□□□ -0.13
GFAP-220ENST00000591880 SBF1O95248 1867 aa14.27□□□□□ -0.13
GFAP-220ENST00000591880 SLX4Q8IY92 1834 aa14.27□□□□□ -0.13
GFAP-220ENST00000591880 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
GFAP-220ENST00000591880 ELL2O00472 640 aaPredicted RBP14.26□□□□□ -0.13
GFAP-220ENST00000591880 HSP90B1P14625 803 aaKnown RBP14.26□□□□□ -0.13
GFAP-220ENST00000591880 HOXA10P31260 410 aaPredicted RBP14.26□□□□□ -0.13
GFAP-220ENST00000591880 SLC10A5Q5PT55 438 aa14.26□□□□□ -0.13
GFAP-220ENST00000591880 RIC3Q7Z5B4 369 aa14.26□□□□□ -0.13
GFAP-220ENST00000591880 CRAMP1Q96RY5 1269 aa14.26□□□□□ -0.13
GFAP-220ENST00000591880 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
GFAP-220ENST00000591880 ZNF219Q9P2Y4 722 aaPredicted RBP14.26□□□□□ -0.13
GFAP-220ENST00000591880 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
GFAP-220ENST00000591880 TRIM28Q13263 835 aaKnown RBP14.25□□□□□ -0.13
GFAP-220ENST00000591880 C7orf43Q8WVR3 580 aa14.25□□□□□ -0.13
GFAP-220ENST00000591880 ISCA1Q9BUE6 129 aa14.25□□□□□ -0.13
GFAP-220ENST00000591880 TMX4Q9H1E5 349 aaPredicted RBP14.25□□□□□ -0.13
GFAP-220ENST00000591880 FKBP4Q02790 459 aaKnown RBP eCLIP14.24□□□□□ -0.13
GFAP-220ENST00000591880 CCER2I3L3R5 266 aa14.23□□□□□ -0.13
GFAP-220ENST00000591880 KIF3CO14782 793 aa14.23□□□□□ -0.13
GFAP-220ENST00000591880 PPEF1O14829 653 aaPredicted RBP14.23□□□□□ -0.13
GFAP-220ENST00000591880 DPY19L2Q6NUT2 758 aa14.23□□□□□ -0.13
GFAP-220ENST00000591880 TSPYL6Q8N831 410 aa14.23□□□□□ -0.13
GFAP-220ENST00000591880 PSMD1Q99460 953 aa14.23□□□□□ -0.13
GFAP-220ENST00000591880 PHAXQ9H814 394 aaKnown RBP14.23□□□□□ -0.13
GFAP-220ENST00000591880 SALL2Q9Y467 1007 aaPredicted RBP14.23□□□□□ -0.13
GFAP-220ENST00000591880 LAMB2P55268 1798 aa14.22□□□□□ -0.13
GFAP-220ENST00000591880 DICER1Q9UPY3 1922 aaKnown RBP14.22□□□□□ -0.13
GFAP-220ENST00000591880 GLTPD2A6NH11 291 aa14.22□□□□□ -0.13
GFAP-220ENST00000591880 TMC4Q7Z404 712 aa14.22□□□□□ -0.13
GFAP-220ENST00000591880 C16orf71Q8IYS4 520 aaPredicted RBP14.22□□□□□ -0.13
GFAP-220ENST00000591880 CCDC191Q8NCU4 936 aa14.22□□□□□ -0.13
GFAP-220ENST00000591880 NEXNQ0ZGT2 675 aa14.21□□□□□ -0.13
GFAP-220ENST00000591880 DDX46Q7L014 1031 aaKnown RBP14.21□□□□□ -0.13
GFAP-220ENST00000591880 SNED1Q8TER0 1413 aa14.21□□□□□ -0.13
GFAP-220ENST00000591880 ABCC4O15439 1325 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 SENP3-EIF4A1A0A087X0R7 540 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 ATP5J2-PTCD1G3V325 749 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 TOMM70O94826 608 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 PRELPP51888 382 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 GRAPQ13588 217 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 KSR2Q6VAB6 950 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 ZBTB38Q8NAP3 1195 aaPredicted RBP14.2□□□□□ -0.14
GFAP-220ENST00000591880 GRAPLQ8TC17 118 aaPredicted RBP14.2□□□□□ -0.14
GFAP-220ENST00000591880 MYD88Q99836 296 aa14.2□□□□□ -0.14
GFAP-220ENST00000591880 METTL22Q9BUU2 404 aaPredicted RBP14.2□□□□□ -0.14
GFAP-220ENST00000591880 CWC25Q9NXE8 425 aaPredicted RBP14.2□□□□□ -0.14
GFAP-220ENST00000591880 DDX60Q8IY21 1712 aaKnown RBP14.2□□□□□ -0.14
GFAP-220ENST00000591880 BBOX1O75936 387 aa14.19□□□□□ -0.14
GFAP-220ENST00000591880 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
GFAP-220ENST00000591880 HCLS1P14317 486 aaPredicted RBP14.19□□□□□ -0.14
GFAP-220ENST00000591880 C3orf67Q6ZVT6 689 aa14.19□□□□□ -0.14
GFAP-220ENST00000591880 NMRK2Q9NPI5 230 aa14.19□□□□□ -0.14
GFAP-220ENST00000591880 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 ZNF521Q96K83 1311 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 IRS4O14654 1257 aaPredicted RBP14.18□□□□□ -0.14
GFAP-220ENST00000591880 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
GFAP-220ENST00000591880 IARSP41252 1262 aaKnown RBP14.18□□□□□ -0.14
GFAP-220ENST00000591880 EXOSC9Q06265 439 aaKnown RBP14.18□□□□□ -0.14
GFAP-220ENST00000591880 FLIIQ13045 1269 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 SF3B3Q15393 1217 aaKnown RBP14.18□□□□□ -0.14
GFAP-220ENST00000591880 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 RBM46Q8TBY0 533 aaKnown RBP14.18□□□□□ -0.14
GFAP-220ENST00000591880 FAM89AQ96GI7 184 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 VPS33BQ9H267 617 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 MAP3K2Q9Y2U5 619 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 ATP6V0A2Q9Y487 856 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 CACNA1FO60840 1977 aa14.18□□□□□ -0.14
GFAP-220ENST00000591880 PI4KAP2A4QPH2 592 aa14.17□□□□□ -0.14
GFAP-220ENST00000591880 VAMP4O75379 141 aa14.17□□□□□ -0.14
GFAP-220ENST00000591880 VEGFAP15692 232 aaPredicted RBP14.17□□□□□ -0.14
GFAP-220ENST00000591880 PI4KAP1Q8N8J0 262 aa14.17□□□□□ -0.14
GFAP-220ENST00000591880 JDP2Q8WYK2 163 aa14.17□□□□□ -0.14
GFAP-220ENST00000591880 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
GFAP-220ENST00000591880 CDHR2Q9BYE9 1310 aa14.16□□□□□ -0.14
GFAP-220ENST00000591880 IQCA1LA6NCM1 817 aa14.16□□□□□ -0.14
GFAP-220ENST00000591880 E9PSI1 815 aa14.16□□□□□ -0.14
GFAP-220ENST00000591880 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
GFAP-220ENST00000591880 SP8Q8IXZ3 490 aa14.16□□□□□ -0.14
GFAP-220ENST00000591880 SYNE4Q8N205 404 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms