RNA–Protein interactions for RNA: ENST00000591547.5

RETREG3-211, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-211ENST00000591547 CAPNS2Q96L46 248 aa13.18□□□□□ -0.3
RETREG3-211ENST00000591547 TRPM7Q96QT4 1865 aa13.18□□□□□ -0.3
RETREG3-211ENST00000591547 SCNN1DP51172 638 aa13.17□□□□□ -0.3
RETREG3-211ENST00000591547 RSPH6AQ9H0K4 717 aa13.17□□□□□ -0.3
RETREG3-211ENST00000591547 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
RETREG3-211ENST00000591547 ZNF652Q9Y2D9 606 aa13.17□□□□□ -0.3
RETREG3-211ENST00000591547 NUP98P52948 1817 aa13.16□□□□□ -0.3
RETREG3-211ENST00000591547 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
RETREG3-211ENST00000591547 GTF2E1P29083 439 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-211ENST00000591547 ALDH1B1P30837 517 aa13.16□□□□□ -0.3
RETREG3-211ENST00000591547 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
RETREG3-211ENST00000591547 GPR101Q96P66 508 aaPredicted RBP13.16□□□□□ -0.3
RETREG3-211ENST00000591547 EIF6P56537 245 aaKnown RBP13.15□□□□□ -0.3
RETREG3-211ENST00000591547 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
RETREG3-211ENST00000591547 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
RETREG3-211ENST00000591547 PSMD1Q99460 953 aa13.15□□□□□ -0.3
RETREG3-211ENST00000591547 CASP8AP2Q9UKL3 1982 aa13.14□□□□□ -0.31
RETREG3-211ENST00000591547 GPTP24298 496 aa13.14□□□□□ -0.31
RETREG3-211ENST00000591547 LMOD1P29536 600 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-211ENST00000591547 MLLT1Q03111 559 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-211ENST00000591547 LARGE2Q8N3Y3 721 aa13.14□□□□□ -0.31
RETREG3-211ENST00000591547 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
RETREG3-211ENST00000591547 CRY2Q49AN0 593 aa13.13□□□□□ -0.31
RETREG3-211ENST00000591547 TTLL7Q6ZT98 887 aa13.13□□□□□ -0.31
RETREG3-211ENST00000591547 TLL2Q9Y6L7 1015 aa13.13□□□□□ -0.31
RETREG3-211ENST00000591547 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
RETREG3-211ENST00000591547 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
RETREG3-211ENST00000591547 DLK2Q6UY11 383 aa13.12□□□□□ -0.31
RETREG3-211ENST00000591547 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
RETREG3-211ENST00000591547 MCOLN1Q9GZU1 580 aa13.12□□□□□ -0.31
RETREG3-211ENST00000591547 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
RETREG3-211ENST00000591547 ECE1P42892 770 aa13.11□□□□□ -0.31
RETREG3-211ENST00000591547 RGS19P49795 217 aa13.11□□□□□ -0.31
RETREG3-211ENST00000591547 AOC3Q16853 763 aa13.11□□□□□ -0.31
RETREG3-211ENST00000591547 USP50Q70EL3 339 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-211ENST00000591547 RTF1Q92541 710 aaKnown RBP13.11□□□□□ -0.31
RETREG3-211ENST00000591547 RPGRQ92834 1020 aaKnown RBP13.11□□□□□ -0.31
RETREG3-211ENST00000591547 ZIC5Q96T25 663 aa13.11□□□□□ -0.31
RETREG3-211ENST00000591547 GLIS2Q9BZE0 524 aaPredicted RBP13.11□□□□□ -0.31
RETREG3-211ENST00000591547 ZBTB3Q9H5J0 574 aa13.11□□□□□ -0.31
RETREG3-211ENST00000591547 RRP7AQ9Y3A4 280 aaKnown RBP13.11□□□□□ -0.31
RETREG3-211ENST00000591547 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-211ENST00000591547 CELF2O95319 508 aaKnown RBP13.1□□□□□ -0.31
RETREG3-211ENST00000591547 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-211ENST00000591547 MYL6BP14649 208 aa13.1□□□□□ -0.31
RETREG3-211ENST00000591547 HOXA10P31260 410 aaPredicted RBP13.1□□□□□ -0.31
RETREG3-211ENST00000591547 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
RETREG3-211ENST00000591547 ZNF408Q9H9D4 720 aa13.1□□□□□ -0.31
RETREG3-211ENST00000591547 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 PPIP5K2O43314 1243 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 CXCL9Q07325 125 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 NIM1KQ8IY84 436 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 NYXQ9GZU5 481 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 GPRC5DQ9NZD1 345 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 DLG5Q8TDM6 1919 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 KDM3BQ7LBC6 1761 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 MAP3K15Q6ZN16 1313 aa13.09□□□□□ -0.31
RETREG3-211ENST00000591547 NPC1L1Q9UHC9 1359 aa13.08□□□□□ -0.31
RETREG3-211ENST00000591547 TAF1P21675 1872 aa13.08□□□□□ -0.32
RETREG3-211ENST00000591547 GMPSP49915 693 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-211ENST00000591547 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-211ENST00000591547 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
RETREG3-211ENST00000591547 CC2D2BQ6DHV5 1058 aa13.08□□□□□ -0.32
RETREG3-211ENST00000591547 CIAPIN1Q6FI81 312 aa13.08□□□□□ -0.32
RETREG3-211ENST00000591547 SAPCD2Q86UD0 394 aa13.08□□□□□ -0.32
RETREG3-211ENST00000591547 RBM17Q96I25 401 aaKnown RBP13.08□□□□□ -0.32
RETREG3-211ENST00000591547 ADARB2Q9NS39 739 aaKnown RBP13.08□□□□□ -0.32
RETREG3-211ENST00000591547 LAMB2P55268 1798 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 RIC1Q4ADV7 1423 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 RGL2O15211 777 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 NTSR2O95665 410 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 MAP2K2P36507 400 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 DGKZQ13574 1117 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 ZNF428Q96B54 188 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 CRAMP1Q96RY5 1269 aa13.07□□□□□ -0.32
RETREG3-211ENST00000591547 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
RETREG3-211ENST00000591547 RAD17O75943 681 aa13.06□□□□□ -0.32
RETREG3-211ENST00000591547 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
RETREG3-211ENST00000591547 ZNF34Q8IZ26 560 aa13.06□□□□□ -0.32
RETREG3-211ENST00000591547 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
RETREG3-211ENST00000591547 THUMPD2Q9BTF0 503 aaKnown RBP13.06□□□□□ -0.32
RETREG3-211ENST00000591547 ZNRF3Q9ULT6 936 aa13.05□□□□□ -0.32
RETREG3-211ENST00000591547 ABCC4O15439 1325 aa13.05□□□□□ -0.32
RETREG3-211ENST00000591547 ANXA1P04083 346 aa13.04□□□□□ -0.32
RETREG3-211ENST00000591547 PPP2R1AP30153 589 aa13.04□□□□□ -0.32
RETREG3-211ENST00000591547 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
RETREG3-211ENST00000591547 USP48Q86UV5 1035 aa13.04□□□□□ -0.32
RETREG3-211ENST00000591547 NUDCQ9Y266 331 aa13.04□□□□□ -0.32
RETREG3-211ENST00000591547 ATP6V0A2Q9Y487 856 aa13.04□□□□□ -0.32
RETREG3-211ENST00000591547 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
RETREG3-211ENST00000591547 BRPF1P55201 1214 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-211ENST00000591547 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
RETREG3-211ENST00000591547 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
RETREG3-211ENST00000591547 ZBTB12Q9Y330 459 aaPredicted RBP13.03□□□□□ -0.32
RETREG3-211ENST00000591547 POLR2AP24928 1970 aaKnown RBP13.03□□□□□ -0.32
RETREG3-211ENST00000591547 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
RETREG3-211ENST00000591547 HCLS1P14317 486 aaPredicted RBP13.02□□□□□ -0.33
RETREG3-211ENST00000591547 SOX10P56693 466 aa13.02□□□□□ -0.33
RETREG3-211ENST00000591547 PROSER3Q2NL68 480 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms