RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 TRIM28Q13263 835 aaKnown RBP17.92■□□□□ 0.46
MBD1-225ENST00000591535 CWC25Q9NXE8 425 aaPredicted RBP17.92■□□□□ 0.46
MBD1-225ENST00000591535 KIF13BQ9NQT8 1826 aa17.92■□□□□ 0.46
MBD1-225ENST00000591535 BCAR3O75815 825 aa17.91■□□□□ 0.46
MBD1-225ENST00000591535 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
MBD1-225ENST00000591535 CCDC191Q8NCU4 936 aa17.91■□□□□ 0.46
MBD1-225ENST00000591535 WWC3Q9ULE0 1092 aa17.91■□□□□ 0.46
MBD1-225ENST00000591535 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
MBD1-225ENST00000591535 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
MBD1-225ENST00000591535 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
MBD1-225ENST00000591535 H0YIN7 160 aa17.9■□□□□ 0.46
MBD1-225ENST00000591535 DPEP1P16444 411 aa17.9■□□□□ 0.46
MBD1-225ENST00000591535 CWF19L2Q2TBE0 894 aaKnown RBP17.9■□□□□ 0.46
MBD1-225ENST00000591535 C2CD5Q86YS7 1000 aa17.9■□□□□ 0.46
MBD1-225ENST00000591535 PELP1Q8IZL8 1130 aaKnown RBP17.9■□□□□ 0.46
MBD1-225ENST00000591535 IGKV5-2P06315 115 aa17.9■□□□□ 0.46
MBD1-225ENST00000591535 CHRNA5P30532 468 aa17.9■□□□□ 0.46
MBD1-225ENST00000591535 FRAT1Q92837 279 aaPredicted RBP17.9■□□□□ 0.46
MBD1-225ENST00000591535 FAM89AQ96GI7 184 aa17.9■□□□□ 0.46
MBD1-225ENST00000591535 SH3TC1Q8TE82 1336 aa17.89■□□□□ 0.46
MBD1-225ENST00000591535 LINS1Q8NG48 757 aa17.89■□□□□ 0.45
MBD1-225ENST00000591535 RNF123Q5XPI4 1314 aa17.89■□□□□ 0.45
MBD1-225ENST00000591535 KIF16BQ96L93 1317 aa17.89■□□□□ 0.45
MBD1-225ENST00000591535 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
MBD1-225ENST00000591535 DCAF8L1A6NGE4 600 aa17.88■□□□□ 0.45
MBD1-225ENST00000591535 NEURL1BA8MQ27 555 aa17.88■□□□□ 0.45
MBD1-225ENST00000591535 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
MBD1-225ENST00000591535 SYNE4Q8N205 404 aa17.88■□□□□ 0.45
MBD1-225ENST00000591535 PXDNLA1KZ92 1463 aa17.88■□□□□ 0.45
MBD1-225ENST00000591535 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
MBD1-225ENST00000591535 IPO8O15397 1037 aaKnown RBP17.87■□□□□ 0.45
MBD1-225ENST00000591535 ZBTB38Q8NAP3 1195 aaPredicted RBP17.87■□□□□ 0.45
MBD1-225ENST00000591535 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
MBD1-225ENST00000591535 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
MBD1-225ENST00000591535 PDZRN3Q9UPQ7 1066 aa17.87■□□□□ 0.45
MBD1-225ENST00000591535 HCLS1P14317 486 aaPredicted RBP17.87■□□□□ 0.45
MBD1-225ENST00000591535 BEND3Q5T5X7 828 aa17.87■□□□□ 0.45
MBD1-225ENST00000591535 ZNF622Q969S3 477 aaKnown RBP eCLIP17.87■□□□□ 0.456e-7■■■□□ 16.6
MBD1-225ENST00000591535 NLRP3Q96P20 1036 aa17.87■□□□□ 0.45
MBD1-225ENST00000591535 SRCIN1Q9C0H9 1055 aa17.87■□□□□ 0.45
MBD1-225ENST00000591535 GCKRQ14397 625 aa17.86■□□□□ 0.45
MBD1-225ENST00000591535 GPR162Q16538 588 aa17.86■□□□□ 0.45
MBD1-225ENST00000591535 SLC10A5Q5PT55 438 aa17.86■□□□□ 0.45
MBD1-225ENST00000591535 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
MBD1-225ENST00000591535 KIAA1551Q9HCM1 1747 aa17.85■□□□□ 0.45
MBD1-225ENST00000591535 IRS4O14654 1257 aaPredicted RBP17.85■□□□□ 0.45
MBD1-225ENST00000591535 PCCAP05165 728 aaPredicted RBP17.85■□□□□ 0.45
MBD1-225ENST00000591535 KCNA3P22001 575 aa17.85■□□□□ 0.45
MBD1-225ENST00000591535 RCAN3Q9UKA8 241 aa17.85■□□□□ 0.45
MBD1-225ENST00000591535 HSP90B1P14625 803 aaKnown RBP17.84■□□□□ 0.45
MBD1-225ENST00000591535 ARHGAP45Q92619 1136 aa17.84■□□□□ 0.45
MBD1-225ENST00000591535 RPGRQ92834 1020 aaKnown RBP17.84■□□□□ 0.45
MBD1-225ENST00000591535 UTRNP46939 3433 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 ALDH1L1O75891 902 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 SRGNP10124 158 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.45
MBD1-225ENST00000591535 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 UBE3BQ7Z3V4 1068 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 MASTLQ96GX5 879 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 C9orf78Q9NZ63 289 aaPredicted RBP17.83■□□□□ 0.45
MBD1-225ENST00000591535 BCS1LQ9Y276 419 aa17.83■□□□□ 0.45
MBD1-225ENST00000591535 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.44
MBD1-225ENST00000591535 KLRG2A4D1S0 409 aaPredicted RBP17.83■□□□□ 0.44
MBD1-225ENST00000591535 C3orf67Q6ZVT6 689 aa17.83■□□□□ 0.44
MBD1-225ENST00000591535 NPR1P16066 1061 aa17.82■□□□□ 0.44
MBD1-225ENST00000591535 ATF7IPQ6VMQ6 1270 aa17.82■□□□□ 0.44
MBD1-225ENST00000591535 TTLL6Q8N841 843 aa17.82■□□□□ 0.44
MBD1-225ENST00000591535 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
MBD1-225ENST00000591535 COL11A2P13942 1736 aaPredicted RBP17.82■□□□□ 0.44
MBD1-225ENST00000591535 H7C1W4 665 aa17.81■□□□□ 0.44
MBD1-225ENST00000591535 TRIM27P14373 513 aa17.81■□□□□ 0.44
MBD1-225ENST00000591535 CCT4P50991 539 aaKnown RBP17.81■□□□□ 0.44
MBD1-225ENST00000591535 STYK1Q6J9G0 422 aa17.81■□□□□ 0.44
MBD1-225ENST00000591535 CNKSR1Q969H4 720 aa17.81■□□□□ 0.44
MBD1-225ENST00000591535 CLUAP1Q96AJ1 413 aa17.81■□□□□ 0.44
MBD1-225ENST00000591535 DLEC1Q9Y238 1755 aa17.8■□□□□ 0.44
MBD1-225ENST00000591535 DDX60Q8IY21 1712 aaKnown RBP17.8■□□□□ 0.44
MBD1-225ENST00000591535 GRM8O00222 908 aa17.8■□□□□ 0.44
MBD1-225ENST00000591535 CRY2Q49AN0 593 aa17.8■□□□□ 0.44
MBD1-225ENST00000591535 RBM17Q96I25 401 aaKnown RBP17.8■□□□□ 0.44
MBD1-225ENST00000591535 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
MBD1-225ENST00000591535 CDHR2Q9BYE9 1310 aa17.8■□□□□ 0.44
MBD1-225ENST00000591535 PDE8AO60658 829 aa17.8■□□□□ 0.44
MBD1-225ENST00000591535 ALDH1B1P30837 517 aa17.8■□□□□ 0.44
MBD1-225ENST00000591535 CACNA1SQ13698 1873 aa17.79■□□□□ 0.44
MBD1-225ENST00000591535 LAMB2P55268 1798 aa17.79■□□□□ 0.44
MBD1-225ENST00000591535 YBX3P16989 372 aaKnown RBP eCLIP17.79■□□□□ 0.44
MBD1-225ENST00000591535 DDX46Q7L014 1031 aaKnown RBP17.79■□□□□ 0.44
MBD1-225ENST00000591535 FTSJ3Q8IY81 847 aaKnown RBP17.79■□□□□ 0.44
MBD1-225ENST00000591535 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
MBD1-225ENST00000591535 TNNQ9UQP3 1299 aa17.79■□□□□ 0.44
MBD1-225ENST00000591535 CCDC85AQ96PX6 553 aaPredicted RBP17.78■□□□□ 0.44
MBD1-225ENST00000591535 HOXA10P31260 410 aaPredicted RBP17.77■□□□□ 0.44
MBD1-225ENST00000591535 SF3B3Q15393 1217 aaKnown RBP17.77■□□□□ 0.44
MBD1-225ENST00000591535 PRPF40BQ6NWY9 871 aaKnown RBP17.77■□□□□ 0.44
MBD1-225ENST00000591535 ABCC4O15439 1325 aa17.77■□□□□ 0.43
MBD1-225ENST00000591535 GRIN3BO60391 1043 aa17.76■□□□□ 0.43
MBD1-225ENST00000591535 NBPF7P0C2Y1 421 aaPredicted RBP17.76■□□□□ 0.43
MBD1-225ENST00000591535 CCDC152Q4G0S7 254 aa17.76■□□□□ 0.43
MBD1-225ENST00000591535 CASP7P55210 303 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms