RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SLC51AQ86UW1 340 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 JARID2Q92833 1246 aaPredicted RBP14.82□□□□□ -0.04
VMP1-211ENST00000591315 MYD88Q99836 296 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 UTP14AQ9BVJ6 771 aaKnown RBP14.82□□□□□ -0.04
VMP1-211ENST00000591315 STK31Q9BXU1 1019 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 SLX4Q8IY92 1834 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 CACNA1SQ13698 1873 aa14.82□□□□□ -0.04
VMP1-211ENST00000591315 ARFGEF1Q9Y6D6 1849 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 E9PSI1 815 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 HCLS1P14317 486 aaPredicted RBP14.81□□□□□ -0.04
VMP1-211ENST00000591315 YY1P25490 414 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 HSP90AB3PQ58FF7 597 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 RTL5Q5HYW3 569 aaPredicted RBP14.81□□□□□ -0.04
VMP1-211ENST00000591315 TRMT2AQ8IZ69 625 aaKnown RBP14.81□□□□□ -0.04
VMP1-211ENST00000591315 NYXQ9GZU5 481 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 MAP3K2Q9Y2U5 619 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 ADCY9O60503 1353 aa14.81□□□□□ -0.04
VMP1-211ENST00000591315 KLRG2A4D1S0 409 aaPredicted RBP14.8□□□□□ -0.04
VMP1-211ENST00000591315 PI4KAP2A4QPH2 592 aa14.8□□□□□ -0.04
VMP1-211ENST00000591315 PARP10Q53GL7 1025 aa14.8□□□□□ -0.04
VMP1-211ENST00000591315 OLFM4Q6UX06 510 aa14.8□□□□□ -0.04
VMP1-211ENST00000591315 PPP1R42Q7Z4L9 355 aa14.8□□□□□ -0.04
VMP1-211ENST00000591315 TTLL6Q8N841 843 aa14.8□□□□□ -0.04
VMP1-211ENST00000591315 PI4KAP1Q8N8J0 262 aa14.8□□□□□ -0.04
VMP1-211ENST00000591315 CACNA1FO60840 1977 aa14.79□□□□□ -0.04
VMP1-211ENST00000591315 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
VMP1-211ENST00000591315 FLIIQ13045 1269 aa14.79□□□□□ -0.04
VMP1-211ENST00000591315 FAM89AQ96GI7 184 aa14.79□□□□□ -0.04
VMP1-211ENST00000591315 IBTKQ9P2D0 1353 aaPredicted RBP14.79□□□□□ -0.04
VMP1-211ENST00000591315 TRMT112Q9UI30 125 aaKnown RBP14.79□□□□□ -0.04
VMP1-211ENST00000591315 C21orf2O43822 256 aa14.78□□□□□ -0.04
VMP1-211ENST00000591315 IGKV5-2P06315 115 aa14.78□□□□□ -0.04
VMP1-211ENST00000591315 STYK1Q6J9G0 422 aa14.78□□□□□ -0.04
VMP1-211ENST00000591315 KSR2Q6VAB6 950 aa14.78□□□□□ -0.04
VMP1-211ENST00000591315 MASTLQ96GX5 879 aa14.78□□□□□ -0.04
VMP1-211ENST00000591315 METTL22Q9BUU2 404 aaPredicted RBP14.78□□□□□ -0.04
VMP1-211ENST00000591315 F6X3S4 739 aa14.77□□□□□ -0.05
VMP1-211ENST00000591315 PRELPP51888 382 aa14.77□□□□□ -0.05
VMP1-211ENST00000591315 RASSF7Q02833 373 aa14.77□□□□□ -0.05
VMP1-211ENST00000591315 SLC10A5Q5PT55 438 aa14.77□□□□□ -0.05
VMP1-211ENST00000591315 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.05
VMP1-211ENST00000591315 TAF1P21675 1872 aa14.77□□□□□ -0.05
VMP1-211ENST00000591315 LAMB2P55268 1798 aa14.77□□□□□ -0.05
VMP1-211ENST00000591315 SH3TC1Q8TE82 1336 aa14.76□□□□□ -0.05
VMP1-211ENST00000591315 DDX58O95786 925 aaKnown RBP14.76□□□□□ -0.05
VMP1-211ENST00000591315 NPR1P16066 1061 aa14.76□□□□□ -0.05
VMP1-211ENST00000591315 TRIM28Q13263 835 aaKnown RBP14.76□□□□□ -0.05
VMP1-211ENST00000591315 FKBP5Q13451 457 aaPredicted RBP14.76□□□□□ -0.05
VMP1-211ENST00000591315 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
VMP1-211ENST00000591315 CRY2Q49AN0 593 aa14.76□□□□□ -0.05
VMP1-211ENST00000591315 BCL2L13Q9BXK5 485 aa14.76□□□□□ -0.05
VMP1-211ENST00000591315 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
VMP1-211ENST00000591315 PDZRN3Q9UPQ7 1066 aa14.76□□□□□ -0.05
VMP1-211ENST00000591315 DDX60Q8IY21 1712 aaKnown RBP14.75□□□□□ -0.05
VMP1-211ENST00000591315 MRPL50Q8N5N7 158 aaKnown RBP14.75□□□□□ -0.05
VMP1-211ENST00000591315 C7orf43Q8WVR3 580 aa14.75□□□□□ -0.05
VMP1-211ENST00000591315 SSH1Q8WYL5 1049 aa14.75□□□□□ -0.05
VMP1-211ENST00000591315 CNKSR1Q969H4 720 aa14.75□□□□□ -0.05
VMP1-211ENST00000591315 RIC1Q4ADV7 1423 aa14.75□□□□□ -0.05
VMP1-211ENST00000591315 SBF1O95248 1867 aa14.74□□□□□ -0.05
VMP1-211ENST00000591315 NFKBIEO00221 500 aa14.74□□□□□ -0.05
VMP1-211ENST00000591315 CWC25Q9NXE8 425 aaPredicted RBP14.74□□□□□ -0.05
VMP1-211ENST00000591315 COL4A1P02462 1669 aa14.74□□□□□ -0.05
VMP1-211ENST00000591315 CCDC88AQ3V6T2 1871 aa14.74□□□□□ -0.05
VMP1-211ENST00000591315 NEURL1BA8MQ27 555 aa14.73□□□□□ -0.05
VMP1-211ENST00000591315 IRS4O14654 1257 aaPredicted RBP14.73□□□□□ -0.05
VMP1-211ENST00000591315 HOXA10P31260 410 aaPredicted RBP14.73□□□□□ -0.05
VMP1-211ENST00000591315 CCDC191Q8NCU4 936 aa14.73□□□□□ -0.05
VMP1-211ENST00000591315 DNAAF4Q8WXU2 420 aa14.73□□□□□ -0.05
VMP1-211ENST00000591315 RPGRQ92834 1020 aaKnown RBP14.73□□□□□ -0.05
VMP1-211ENST00000591315 NLRP3Q96P20 1036 aa14.73□□□□□ -0.05
VMP1-211ENST00000591315 C9orf131Q5VYM1 1079 aa14.72□□□□□ -0.05
VMP1-211ENST00000591315 ZBTB38Q8NAP3 1195 aaPredicted RBP14.72□□□□□ -0.05
VMP1-211ENST00000591315 ZNF784Q8NCA9 323 aaPredicted RBP14.72□□□□□ -0.05
VMP1-211ENST00000591315 FER1L6Q2WGJ9 1857 aa14.72□□□□□ -0.05
VMP1-211ENST00000591315 ABCC4O15439 1325 aa14.71□□□□□ -0.05
VMP1-211ENST00000591315 RNF123Q5XPI4 1314 aa14.71□□□□□ -0.05
VMP1-211ENST00000591315 PCCAP05165 728 aaPredicted RBP14.71□□□□□ -0.05
VMP1-211ENST00000591315 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
VMP1-211ENST00000591315 ZNF526Q8TF50 670 aaPredicted RBP14.7□□□□□ -0.06
VMP1-211ENST00000591315 RBM17Q96I25 401 aaKnown RBP14.7□□□□□ -0.06
VMP1-211ENST00000591315 CRAMP1Q96RY5 1269 aa14.7□□□□□ -0.06
VMP1-211ENST00000591315 RNF181Q9P0P0 153 aa14.7□□□□□ -0.06
VMP1-211ENST00000591315 ALDH1B1P30837 517 aa14.69□□□□□ -0.06
VMP1-211ENST00000591315 NEXNQ0ZGT2 675 aa14.69□□□□□ -0.06
VMP1-211ENST00000591315 GCKRQ14397 625 aa14.69□□□□□ -0.06
VMP1-211ENST00000591315 BEND3Q5T5X7 828 aa14.69□□□□□ -0.06
VMP1-211ENST00000591315 SLC4A10Q6U841 1118 aa14.69□□□□□ -0.06
VMP1-211ENST00000591315 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
VMP1-211ENST00000591315 H7C1W4 665 aa14.68□□□□□ -0.06
VMP1-211ENST00000591315 PPEF1O14829 653 aaPredicted RBP14.68□□□□□ -0.06
VMP1-211ENST00000591315 CASP7P55210 303 aa14.68□□□□□ -0.06
VMP1-211ENST00000591315 SF3B3Q15393 1217 aaKnown RBP14.68□□□□□ -0.06
VMP1-211ENST00000591315 LINS1Q8NG48 757 aa14.68□□□□□ -0.06
VMP1-211ENST00000591315 CELF1Q92879 486 aaKnown RBP14.68□□□□□ -0.06
VMP1-211ENST00000591315 SEC31BQ9NQW1 1179 aa14.68□□□□□ -0.06
VMP1-211ENST00000591315 SMC4Q9NTJ3 1288 aa14.68□□□□□ -0.06
VMP1-211ENST00000591315 SNED1Q8TER0 1413 aa14.67□□□□□ -0.06
VMP1-211ENST00000591315 RARSP54136 660 aaKnown RBP14.67□□□□□ -0.06
VMP1-211ENST00000591315 CCDC93Q567U6 631 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 372 ms