RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 DNAAF4Q8WXU2 420 aa26.92■■□□□ 1.9
CIRBP-229ENST00000590704 BRIP1Q9BX63 1249 aa26.92■■□□□ 1.9
CIRBP-229ENST00000590704 DPEP1P16444 411 aa26.91■■□□□ 1.9
CIRBP-229ENST00000590704 CHRNA5P30532 468 aa26.91■■□□□ 1.9
CIRBP-229ENST00000590704 SLC10A5Q5PT55 438 aa26.91■■□□□ 1.9
CIRBP-229ENST00000590704 CWF19L2Q2TBE0 894 aaKnown RBP26.9■■□□□ 1.9
CIRBP-229ENST00000590704 YTHDC1Q96MU7 727 aaKnown RBP26.9■■□□□ 1.9
CIRBP-229ENST00000590704 SMC4Q9NTJ3 1288 aa26.9■■□□□ 1.9
CIRBP-229ENST00000590704 BEND3Q5T5X7 828 aa26.89■■□□□ 1.9
CIRBP-229ENST00000590704 C3orf67Q6ZVT6 689 aa26.89■■□□□ 1.9
CIRBP-229ENST00000590704 UTP14AQ9BVJ6 771 aaKnown RBP26.89■■□□□ 1.9
CIRBP-229ENST00000590704 NEURL1BA8MQ27 555 aa26.88■■□□□ 1.89
CIRBP-229ENST00000590704 CCDC191Q8NCU4 936 aa26.88■■□□□ 1.89
CIRBP-229ENST00000590704 NOB1Q9ULX3 412 aaKnown RBP26.88■■□□□ 1.89
CIRBP-229ENST00000590704 PPP1R42Q7Z4L9 355 aa26.87■■□□□ 1.89
CIRBP-229ENST00000590704 NYXQ9GZU5 481 aa26.87■■□□□ 1.89
CIRBP-229ENST00000590704 BRCA1P38398 1863 aaKnown RBP26.87■■□□□ 1.89
CIRBP-229ENST00000590704 TNRC6CQ9HCJ0 1690 aaKnown RBP26.87■■□□□ 1.89
CIRBP-229ENST00000590704 FAM89AQ96GI7 184 aa26.87■■□□□ 1.89
CIRBP-229ENST00000590704 PTPRCP08575 1304 aa26.86■■□□□ 1.89
CIRBP-229ENST00000590704 TRMT112Q9UI30 125 aaKnown RBP26.86■■□□□ 1.89
CIRBP-229ENST00000590704 TNNQ9UQP3 1299 aa26.86■■□□□ 1.89
CIRBP-229ENST00000590704 COL11A2P13942 1736 aaPredicted RBP26.85■■□□□ 1.89
CIRBP-229ENST00000590704 RIC1Q4ADV7 1423 aa26.85■■□□□ 1.89
CIRBP-229ENST00000590704 LINS1Q8NG48 757 aa26.85■■□□□ 1.89
CIRBP-229ENST00000590704 JARID2Q92833 1246 aaPredicted RBP26.85■■□□□ 1.89
CIRBP-229ENST00000590704 CASP7P55210 303 aa26.84■■□□□ 1.89
CIRBP-229ENST00000590704 CRY2Q49AN0 593 aa26.84■■□□□ 1.89
CIRBP-229ENST00000590704 SRGNP10124 158 aa26.83■■□□□ 1.89
CIRBP-229ENST00000590704 ST5P78524 1137 aa26.83■■□□□ 1.89
CIRBP-229ENST00000590704 ZBTB38Q8NAP3 1195 aaPredicted RBP26.83■■□□□ 1.89
CIRBP-229ENST00000590704 CWC25Q9NXE8 425 aaPredicted RBP26.83■■□□□ 1.89
CIRBP-229ENST00000590704 RNF123Q5XPI4 1314 aa26.83■■□□□ 1.88
CIRBP-229ENST00000590704 H7C1W4 665 aa26.82■■□□□ 1.88
CIRBP-229ENST00000590704 PCCAP05165 728 aaPredicted RBP26.82■■□□□ 1.88
CIRBP-229ENST00000590704 HCLS1P14317 486 aaPredicted RBP26.82■■□□□ 1.88
CIRBP-229ENST00000590704 YBX3P16989 372 aaKnown RBP eCLIP26.82■■□□□ 1.88
CIRBP-229ENST00000590704 GCKRQ14397 625 aa26.82■■□□□ 1.88
CIRBP-229ENST00000590704 SH3TC1Q8TE82 1336 aa26.82■■□□□ 1.88
CIRBP-229ENST00000590704 DDX60Q8IY21 1712 aaKnown RBP26.82■■□□□ 1.88
CIRBP-229ENST00000590704 PDE6BP35913 854 aa26.81■■□□□ 1.88
CIRBP-229ENST00000590704 RTL5Q5HYW3 569 aaPredicted RBP26.81■■□□□ 1.88
CIRBP-229ENST00000590704 C2CD5Q86YS7 1000 aa26.81■■□□□ 1.88
CIRBP-229ENST00000590704 DLEC1Q9Y238 1755 aa26.81■■□□□ 1.88
CIRBP-229ENST00000590704 WWC3Q9ULE0 1092 aa26.81■■□□□ 1.88
CIRBP-229ENST00000590704 ARHGAP45Q92619 1136 aa26.8■■□□□ 1.88
CIRBP-229ENST00000590704 GTF2E1P29083 439 aaPredicted RBP26.79■■□□□ 1.88
CIRBP-229ENST00000590704 NEXNQ0ZGT2 675 aa26.79■■□□□ 1.88
CIRBP-229ENST00000590704 LAMB2P55268 1798 aa26.78■■□□□ 1.88
CIRBP-229ENST00000590704 H0YIN7 160 aa26.78■■□□□ 1.88
CIRBP-229ENST00000590704 SLC4A10Q6U841 1118 aa26.77■■□□□ 1.88
CIRBP-229ENST00000590704 IRS4O14654 1257 aaPredicted RBP26.76■■□□□ 1.87
CIRBP-229ENST00000590704 NPHP1O15259 732 aa26.76■■□□□ 1.87
CIRBP-229ENST00000590704 TRIM27P14373 513 aa26.76■■□□□ 1.87
CIRBP-229ENST00000590704 PIM2Q9P1W9 311 aa26.76■■□□□ 1.87
CIRBP-229ENST00000590704 PDZRN3Q9UPQ7 1066 aa26.76■■□□□ 1.87
CIRBP-229ENST00000590704 COL4A1P02462 1669 aa26.75■■□□□ 1.87
CIRBP-229ENST00000590704 HOXA10P31260 410 aaPredicted RBP26.75■■□□□ 1.87
CIRBP-229ENST00000590704 CDHR2Q9BYE9 1310 aa26.75■■□□□ 1.87
CIRBP-229ENST00000590704 ALDH1L1O75891 902 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 SF3B3Q15393 1217 aaKnown RBP26.74■■□□□ 1.87
CIRBP-229ENST00000590704 STYK1Q6J9G0 422 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 MASTLQ96GX5 879 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 ABCC4O15439 1325 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 KIF16BQ96L93 1317 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 SLX4Q8IY92 1834 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 ATF7IPQ6VMQ6 1270 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 SLC51AQ86UW1 340 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 C7orf43Q8WVR3 580 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 NLRP3Q96P20 1036 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 SRCIN1Q9C0H9 1055 aa26.74■■□□□ 1.87
CIRBP-229ENST00000590704 UTYO14607 1347 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 DCAF8L1A6NGE4 600 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 NPR1P16066 1061 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 UBE3BQ7Z3V4 1068 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 KAZALD1Q96I82 304 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 API5Q9BZZ5 524 aaKnown RBP26.73■■□□□ 1.87
CIRBP-229ENST00000590704 USP44Q9H0E7 712 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 RCAN3Q9UKA8 241 aa26.73■■□□□ 1.87
CIRBP-229ENST00000590704 ZNF622Q969S3 477 aaKnown RBP eCLIP26.72■■□□□ 1.87
CIRBP-229ENST00000590704 TAF1P21675 1872 aa26.72■■□□□ 1.87
CIRBP-229ENST00000590704 NBPF7P0C2Y1 421 aaPredicted RBP26.71■■□□□ 1.87
CIRBP-229ENST00000590704 FRAT1Q92837 279 aaPredicted RBP26.71■■□□□ 1.87
CIRBP-229ENST00000590704 PLA2G12BQ9BX93 195 aa26.71■■□□□ 1.87
CIRBP-229ENST00000590704 PDE8AO60658 829 aa26.7■■□□□ 1.87
CIRBP-229ENST00000590704 RLBP1P12271 317 aa26.7■■□□□ 1.87
CIRBP-229ENST00000590704 INTS3Q68E01 1043 aaKnown RBP26.7■■□□□ 1.87
CIRBP-229ENST00000590704 TTLL6Q8N841 843 aa26.7■■□□□ 1.87
CIRBP-229ENST00000590704 BCS1LQ9Y276 419 aa26.7■■□□□ 1.87
CIRBP-229ENST00000590704 GRM8O00222 908 aa26.69■■□□□ 1.86
CIRBP-229ENST00000590704 FOXO4P98177 505 aa26.69■■□□□ 1.86
CIRBP-229ENST00000590704 EPHA10Q5JZY3 1008 aa26.69■■□□□ 1.86
CIRBP-229ENST00000590704 ARFGEF1Q9Y6D6 1849 aa26.69■■□□□ 1.86
CIRBP-229ENST00000590704 DALRD3Q5D0E6 543 aaKnown RBP26.68■■□□□ 1.86
CIRBP-229ENST00000590704 CRAMP1Q96RY5 1269 aa26.68■■□□□ 1.86
CIRBP-229ENST00000590704 ZKSCAN2Q63HK3 967 aa26.68■■□□□ 1.86
CIRBP-229ENST00000590704 TTLL11Q8NHH1 800 aa26.68■■□□□ 1.86
CIRBP-229ENST00000590704 IPO8O15397 1037 aaKnown RBP26.67■■□□□ 1.86
CIRBP-229ENST00000590704 CSF1RP07333 972 aa26.67■■□□□ 1.86
CIRBP-229ENST00000590704 GPR162Q16538 588 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms