RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 ANKRD13DQ6ZTN6 518 aa27.67■■■□□ 2.02
LRP3-202ENST00000590275 HYPKQ9NX55 129 aa27.67■■■□□ 2.02
LRP3-202ENST00000590275 RIC1Q4ADV7 1423 aa27.66■■■□□ 2.02
LRP3-202ENST00000590275 FANCIQ9NVI1 1328 aa27.66■■■□□ 2.02
LRP3-202ENST00000590275 ISCA1Q9BUE6 129 aa27.65■■■□□ 2.02
LRP3-202ENST00000590275 UTP14AQ9BVJ6 771 aaKnown RBP27.65■■■□□ 2.02
LRP3-202ENST00000590275 GPBP1L1Q9HC44 474 aaPredicted RBP27.65■■■□□ 2.02
LRP3-202ENST00000590275 ATP5J2-PTCD1G3V325 749 aa27.64■■■□□ 2.02
LRP3-202ENST00000590275 PPP1R42Q7Z4L9 355 aa27.64■■■□□ 2.02
LRP3-202ENST00000590275 SLC10A5Q5PT55 438 aa27.63■■■□□ 2.01
LRP3-202ENST00000590275 WDR63Q8IWG1 891 aa27.63■■■□□ 2.01
LRP3-202ENST00000590275 SBF1O95248 1867 aa27.63■■■□□ 2.01
LRP3-202ENST00000590275 KIF3CO14782 793 aa27.62■■■□□ 2.01
LRP3-202ENST00000590275 HSP90AB3PQ58FF7 597 aa27.62■■■□□ 2.01
LRP3-202ENST00000590275 SNED1Q8TER0 1413 aa27.61■■■□□ 2.01
LRP3-202ENST00000590275 HCLS1P14317 486 aaPredicted RBP27.61■■■□□ 2.01
LRP3-202ENST00000590275 LMNB1P20700 586 aa27.61■■■□□ 2.01
LRP3-202ENST00000590275 HOXA10P31260 410 aaPredicted RBP27.61■■■□□ 2.01
LRP3-202ENST00000590275 C1QTNF8P60827 252 aa27.61■■■□□ 2.01
LRP3-202ENST00000590275 TWISTNBQ3B726 338 aaPredicted RBP27.61■■■□□ 2.01
LRP3-202ENST00000590275 ANKRD36CQ5JPF3 1778 aa27.6■■■□□ 2.01
LRP3-202ENST00000590275 ARFGEF2Q9Y6D5 1785 aa27.6■■■□□ 2.01
LRP3-202ENST00000590275 G2E3Q7L622 706 aa27.6■■■□□ 2.01
LRP3-202ENST00000590275 NMRK2Q9NPI5 230 aa27.6■■■□□ 2.01
LRP3-202ENST00000590275 ZNF521Q96K83 1311 aa27.6■■■□□ 2.01
LRP3-202ENST00000590275 CACNA1SQ13698 1873 aa27.59■■■□□ 2.01
LRP3-202ENST00000590275 CCDC30Q5VVM6 783 aa27.59■■■□□ 2.01
LRP3-202ENST00000590275 FER1L6Q2WGJ9 1857 aa27.58■■■□□ 2.01
LRP3-202ENST00000590275 TRMT112Q9UI30 125 aaKnown RBP27.58■■■□□ 2.01
LRP3-202ENST00000590275 EXOSC9Q06265 439 aaKnown RBP27.57■■■□□ 2
LRP3-202ENST00000590275 LTBP3Q9NS15 1303 aa27.57■■■□□ 2
LRP3-202ENST00000590275 VAMP4O75379 141 aa27.56■■■□□ 2
LRP3-202ENST00000590275 FAM89AQ96GI7 184 aa27.56■■■□□ 2
LRP3-202ENST00000590275 ALDH1B1P30837 517 aa27.55■■■□□ 2
LRP3-202ENST00000590275 TRIM28Q13263 835 aaKnown RBP27.55■■■□□ 2
LRP3-202ENST00000590275 RIC3Q7Z5B4 369 aa27.55■■■□□ 2
LRP3-202ENST00000590275 TAOK3Q9H2K8 898 aa27.55■■■□□ 2
LRP3-202ENST00000590275 GOLGA2Q08379 1002 aa27.54■■■□□ 2
LRP3-202ENST00000590275 CCDC93Q567U6 631 aa27.54■■■□□ 2
LRP3-202ENST00000590275 RNF123Q5XPI4 1314 aa27.54■■■□□ 2
LRP3-202ENST00000590275 SH3TC1Q8TE82 1336 aa27.54■■■□□ 2
LRP3-202ENST00000590275 RPGRQ92834 1020 aaKnown RBP27.54■■■□□ 2
LRP3-202ENST00000590275 NLRP3Q96P20 1036 aa27.54■■■□□ 2
LRP3-202ENST00000590275 CRAMP1Q96RY5 1269 aa27.54■■■□□ 2
LRP3-202ENST00000590275 MYD88Q99836 296 aa27.54■■■□□ 2
LRP3-202ENST00000590275 RTL5Q5HYW3 569 aaPredicted RBP27.53■■■□□ 2
LRP3-202ENST00000590275 COL4A1P02462 1669 aa27.52■■■□□ 2
LRP3-202ENST00000590275 ABCC4O15439 1325 aa27.51■■□□□ 1.99
LRP3-202ENST00000590275 SLC4A2P04920 1241 aa27.51■■□□□ 1.99
LRP3-202ENST00000590275 SOGA3Q5TF21 947 aa27.51■■□□□ 1.99
LRP3-202ENST00000590275 JARID2Q92833 1246 aaPredicted RBP27.51■■□□□ 1.99
LRP3-202ENST00000590275 RBM17Q96I25 401 aaKnown RBP27.51■■□□□ 1.99
LRP3-202ENST00000590275 ZNF277Q9NRM2 450 aaPredicted RBP27.51■■□□□ 1.99
LRP3-202ENST00000590275 MAP3K2Q9Y2U5 619 aa27.51■■□□□ 1.99
LRP3-202ENST00000590275 PI4KAP2A4QPH2 592 aa27.5■■□□□ 1.99
LRP3-202ENST00000590275 IGKV5-2P06315 115 aa27.5■■□□□ 1.99
LRP3-202ENST00000590275 FKBP4Q02790 459 aaKnown RBP eCLIP27.5■■□□□ 1.99
LRP3-202ENST00000590275 PI4KAP1Q8N8J0 262 aa27.5■■□□□ 1.99
LRP3-202ENST00000590275 METTL22Q9BUU2 404 aaPredicted RBP27.5■■□□□ 1.99
LRP3-202ENST00000590275 LAMB2P55268 1798 aa27.49■■□□□ 1.99
LRP3-202ENST00000590275 ZC3H4Q9UPT8 1303 aaKnown RBP27.48■■□□□ 1.99
LRP3-202ENST00000590275 TIAM2Q8IVF5 1701 aa27.48■■□□□ 1.99
LRP3-202ENST00000590275 DDX60Q8IY21 1712 aaKnown RBP27.48■■□□□ 1.99
LRP3-202ENST00000590275 CCER2I3L3R5 266 aa27.48■■□□□ 1.99
LRP3-202ENST00000590275 PPEF1O14829 653 aaPredicted RBP27.48■■□□□ 1.99
LRP3-202ENST00000590275 KSR2Q6VAB6 950 aa27.48■■□□□ 1.99
LRP3-202ENST00000590275 RRAGCQ9HB90 399 aa27.48■■□□□ 1.99
LRP3-202ENST00000590275 CCDC88AQ3V6T2 1871 aa27.47■■□□□ 1.99
LRP3-202ENST00000590275 COL4A5P29400 1685 aa27.47■■□□□ 1.99
LRP3-202ENST00000590275 GLTPD2A6NH11 291 aa27.47■■□□□ 1.99
LRP3-202ENST00000590275 STK31Q9BXU1 1019 aa27.47■■□□□ 1.99
LRP3-202ENST00000590275 POTECB2RU33 542 aa27.46■■□□□ 1.99
LRP3-202ENST00000590275 RTKN2Q8IZC4 609 aa27.46■■□□□ 1.99
LRP3-202ENST00000590275 IRS4O14654 1257 aaPredicted RBP27.45■■□□□ 1.98
LRP3-202ENST00000590275 ZBTB38Q8NAP3 1195 aaPredicted RBP27.45■■□□□ 1.98
LRP3-202ENST00000590275 DDX58O95786 925 aaKnown RBP27.44■■□□□ 1.98
LRP3-202ENST00000590275 FLIIQ13045 1269 aa27.44■■□□□ 1.98
LRP3-202ENST00000590275 SF3B3Q15393 1217 aaKnown RBP27.44■■□□□ 1.98
LRP3-202ENST00000590275 CCDC191Q8NCU4 936 aa27.44■■□□□ 1.98
LRP3-202ENST00000590275 MYH16Q9H6N6 1097 aa27.44■■□□□ 1.98
LRP3-202ENST00000590275 KDM2BQ8NHM5 1336 aa27.43■■□□□ 1.98
LRP3-202ENST00000590275 CWF19L2Q2TBE0 894 aaKnown RBP27.43■■□□□ 1.98
LRP3-202ENST00000590275 PSMD1Q99460 953 aa27.43■■□□□ 1.98
LRP3-202ENST00000590275 CHMP4AQ9BY43 222 aa27.43■■□□□ 1.98
LRP3-202ENST00000590275 ATP6V0A2Q9Y487 856 aa27.43■■□□□ 1.98
LRP3-202ENST00000590275 CELF1Q92879 486 aaKnown RBP27.42■■□□□ 1.98
LRP3-202ENST00000590275 CWC25Q9NXE8 425 aaPredicted RBP27.42■■□□□ 1.98
LRP3-202ENST00000590275 PCCAP05165 728 aaPredicted RBP27.41■■□□□ 1.98
LRP3-202ENST00000590275 GRAPQ13588 217 aa27.41■■□□□ 1.98
LRP3-202ENST00000590275 MIER1Q8N108 512 aa27.41■■□□□ 1.98
LRP3-202ENST00000590275 GRAPLQ8TC17 118 aaPredicted RBP27.41■■□□□ 1.98
LRP3-202ENST00000590275 CDCA7LQ96GN5 454 aa27.41■■□□□ 1.98
LRP3-202ENST00000590275 ZNF541Q9H0D2 1346 aa27.41■■□□□ 1.98
LRP3-202ENST00000590275 TAF1P21675 1872 aa27.4■■□□□ 1.98
LRP3-202ENST00000590275 DDNO94850 711 aaPredicted RBP27.4■■□□□ 1.98
LRP3-202ENST00000590275 IARSP41252 1262 aaKnown RBP27.4■■□□□ 1.98
LRP3-202ENST00000590275 CC2D2BQ6DHV5 1058 aa27.4■■□□□ 1.98
LRP3-202ENST00000590275 DICER1Q9UPY3 1922 aaKnown RBP27.39■■□□□ 1.98
LRP3-202ENST00000590275 NEURL1BA8MQ27 555 aa27.39■■□□□ 1.98
LRP3-202ENST00000590275 DDX46Q7L014 1031 aaKnown RBP27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms