RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 KDM2BQ8NHM5 1336 aa17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 CALD1Q05682 793 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 TCIRG1Q13488 830 aa17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 CRY2Q49AN0 593 aa17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 PARP10Q53GL7 1025 aa17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 SLC51AQ86UW1 340 aa17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 TSR2Q969E8 191 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 UTP14AQ9BVJ6 771 aaKnown RBP17.83■□□□□ 0.44
NEDD4L-228ENST00000590248 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
NEDD4L-228ENST00000590248 ALDH1B1P30837 517 aa17.82■□□□□ 0.44
NEDD4L-228ENST00000590248 ANKRD13DQ6ZTN6 518 aa17.82■□□□□ 0.44
NEDD4L-228ENST00000590248 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
NEDD4L-228ENST00000590248 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
NEDD4L-228ENST00000590248 TSPYL6Q8N831 410 aa17.82■□□□□ 0.44
NEDD4L-228ENST00000590248 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
NEDD4L-228ENST00000590248 ATP5J2-PTCD1G3V325 749 aa17.81■□□□□ 0.44
NEDD4L-228ENST00000590248 CCDC93Q567U6 631 aa17.81■□□□□ 0.44
NEDD4L-228ENST00000590248 HSP90AB3PQ58FF7 597 aa17.81■□□□□ 0.44
NEDD4L-228ENST00000590248 RPGRQ92834 1020 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-228ENST00000590248 PHAXQ9H814 394 aaKnown RBP17.81■□□□□ 0.44
NEDD4L-228ENST00000590248 IBTKQ9P2D0 1353 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 TOMM70O94826 608 aa17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 HCLS1P14317 486 aaPredicted RBP17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 FAM9BQ8IZU0 186 aa17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 PLBD2Q8NHP8 589 aa17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 NLRP3Q96P20 1036 aa17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 HYPKQ9NX55 129 aa17.8■□□□□ 0.44
NEDD4L-228ENST00000590248 LTBP3Q9NS15 1303 aa17.79■□□□□ 0.44
NEDD4L-228ENST00000590248 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
NEDD4L-228ENST00000590248 ZNF277Q9NRM2 450 aaPredicted RBP17.79■□□□□ 0.44
NEDD4L-228ENST00000590248 TRMT112Q9UI30 125 aaKnown RBP17.79■□□□□ 0.44
NEDD4L-228ENST00000590248 ZC3H4Q9UPT8 1303 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-228ENST00000590248 HOXA10P31260 410 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-228ENST00000590248 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
NEDD4L-228ENST00000590248 C16orf71Q8IYS4 520 aaPredicted RBP17.78■□□□□ 0.44
NEDD4L-228ENST00000590248 RBM17Q96I25 401 aaKnown RBP17.78■□□□□ 0.44
NEDD4L-228ENST00000590248 HSPA6P17066 643 aa17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 FKBP4Q02790 459 aaKnown RBP eCLIP17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 RTL5Q5HYW3 569 aaPredicted RBP17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
NEDD4L-228ENST00000590248 POTECB2RU33 542 aa17.76■□□□□ 0.43
NEDD4L-228ENST00000590248 DDNO94850 711 aaPredicted RBP17.76■□□□□ 0.43
NEDD4L-228ENST00000590248 DPY19L2Q6NUT2 758 aa17.76■□□□□ 0.43
NEDD4L-228ENST00000590248 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
NEDD4L-228ENST00000590248 CRAMP1Q96RY5 1269 aa17.76■□□□□ 0.43
NEDD4L-228ENST00000590248 SH3TC1Q8TE82 1336 aa17.75■□□□□ 0.43
NEDD4L-228ENST00000590248 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
NEDD4L-228ENST00000590248 PPEF1O14829 653 aaPredicted RBP17.74■□□□□ 0.43
NEDD4L-228ENST00000590248 VEGFAP15692 232 aaPredicted RBP17.74■□□□□ 0.43
NEDD4L-228ENST00000590248 CCDC30Q5VVM6 783 aa17.74■□□□□ 0.43
NEDD4L-228ENST00000590248 ABCC4O15439 1325 aa17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 SNED1Q8TER0 1413 aa17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 WDR90Q96KV7 1748 aa17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 IARSP41252 1262 aaKnown RBP17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 RBM46Q8TBY0 533 aaKnown RBP17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 MYD88Q99836 296 aa17.73■□□□□ 0.43
NEDD4L-228ENST00000590248 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
NEDD4L-228ENST00000590248 JARID2Q92833 1246 aaPredicted RBP17.72■□□□□ 0.43
NEDD4L-228ENST00000590248 CEP350Q5VT06 3117 aa17.72■□□□□ 0.43
NEDD4L-228ENST00000590248 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
NEDD4L-228ENST00000590248 G2E3Q7L622 706 aa17.71■□□□□ 0.43
NEDD4L-228ENST00000590248 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
NEDD4L-228ENST00000590248 IL16Q14005 1332 aa17.71■□□□□ 0.42
NEDD4L-228ENST00000590248 ZNF541Q9H0D2 1346 aa17.71■□□□□ 0.42
NEDD4L-228ENST00000590248 COL4A5P29400 1685 aa17.71■□□□□ 0.42
NEDD4L-228ENST00000590248 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 DDX46Q7L014 1031 aaKnown RBP17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 PSMD1Q99460 953 aa17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 ATP6V0A2Q9Y487 856 aa17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 CACNA1FO60840 1977 aa17.7■□□□□ 0.42
NEDD4L-228ENST00000590248 COL4A1P02462 1669 aa17.69■□□□□ 0.42
NEDD4L-228ENST00000590248 HTRA3P83110 453 aa17.69■□□□□ 0.42
NEDD4L-228ENST00000590248 TRIM28Q13263 835 aaKnown RBP17.69■□□□□ 0.42
NEDD4L-228ENST00000590248 MAP3K2Q9Y2U5 619 aa17.69■□□□□ 0.42
NEDD4L-228ENST00000590248 PI4KAP2A4QPH2 592 aa17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 IRS4O14654 1257 aaPredicted RBP17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 BBOX1O75936 387 aa17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 FSTL1Q12841 308 aa17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 PI4KAP1Q8N8J0 262 aa17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
NEDD4L-228ENST00000590248 FZD9O00144 591 aa17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 POTEIP0CG38 1075 aa17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 POTEJP0CG39 1038 aa17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 GRAPQ13588 217 aa17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 SMC1BQ8NDV3 1235 aa17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 GRAPLQ8TC17 118 aaPredicted RBP17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 CELF1Q92879 486 aaKnown RBP17.67■□□□□ 0.42
NEDD4L-228ENST00000590248 METTL22Q9BUU2 404 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms