RNA–Protein interactions for RNA: ENST00000590027.1

NFIX-212, Transcript of nuclear factor I X, humanhuman

TSL 2

Gene NFIX, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-212ENST00000590027 CCDC93Q567U6 631 aa19.52■□□□□ 0.72
NFIX-212ENST00000590027 C7orf43Q8WVR3 580 aa19.52■□□□□ 0.72
NFIX-212ENST00000590027 ELL2O00472 640 aaPredicted RBP19.51■□□□□ 0.71
NFIX-212ENST00000590027 CCDC27Q2M243 656 aa19.51■□□□□ 0.71
NFIX-212ENST00000590027 OLFM4Q6UX06 510 aa19.51■□□□□ 0.71
NFIX-212ENST00000590027 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
NFIX-212ENST00000590027 NLRP10Q86W26 655 aa19.51■□□□□ 0.71
NFIX-212ENST00000590027 RPGRQ92834 1020 aaKnown RBP19.51■□□□□ 0.71
NFIX-212ENST00000590027 UTP14AQ9BVJ6 771 aaKnown RBP19.51■□□□□ 0.71
NFIX-212ENST00000590027 DDX60Q8IY21 1712 aaKnown RBP19.51■□□□□ 0.71
NFIX-212ENST00000590027 SNED1Q8TER0 1413 aa19.51■□□□□ 0.71
NFIX-212ENST00000590027 TCIRG1Q13488 830 aa19.5■□□□□ 0.71
NFIX-212ENST00000590027 WWC1Q8IX03 1113 aa19.5■□□□□ 0.71
NFIX-212ENST00000590027 C8orf58Q8NAV2 365 aa19.5■□□□□ 0.71
NFIX-212ENST00000590027 RNF123Q5XPI4 1314 aa19.5■□□□□ 0.71
NFIX-212ENST00000590027 ALDH1B1P30837 517 aa19.49■□□□□ 0.71
NFIX-212ENST00000590027 PLBD2Q8NHP8 589 aa19.49■□□□□ 0.71
NFIX-212ENST00000590027 TSR2Q969E8 191 aaKnown RBP19.49■□□□□ 0.71
NFIX-212ENST00000590027 HYPKQ9NX55 129 aa19.49■□□□□ 0.71
NFIX-212ENST00000590027 WDR90Q96KV7 1748 aa19.48■□□□□ 0.71
NFIX-212ENST00000590027 ZNF428Q96B54 188 aa19.48■□□□□ 0.71
NFIX-212ENST00000590027 GLTPD2A6NH11 291 aa19.47■□□□□ 0.71
NFIX-212ENST00000590027 HOXA10P31260 410 aaPredicted RBP19.47■□□□□ 0.71
NFIX-212ENST00000590027 FKBP4Q02790 459 aaKnown RBP eCLIP19.47■□□□□ 0.71
NFIX-212ENST00000590027 ANKRD13DQ6ZTN6 518 aa19.47■□□□□ 0.71
NFIX-212ENST00000590027 SLC51AQ86UW1 340 aa19.47■□□□□ 0.71
NFIX-212ENST00000590027 TSPYL6Q8N831 410 aa19.47■□□□□ 0.71
NFIX-212ENST00000590027 TOMM70O94826 608 aa19.46■□□□□ 0.71
NFIX-212ENST00000590027 SYNE4Q8N205 404 aa19.46■□□□□ 0.71
NFIX-212ENST00000590027 PHAXQ9H814 394 aaKnown RBP19.46■□□□□ 0.71
NFIX-212ENST00000590027 RRAGCQ9HB90 399 aa19.46■□□□□ 0.71
NFIX-212ENST00000590027 TRMT112Q9UI30 125 aaKnown RBP19.46■□□□□ 0.71
NFIX-212ENST00000590027 HCLS1P14317 486 aaPredicted RBP19.45■□□□□ 0.7
NFIX-212ENST00000590027 SLC10A5Q5PT55 438 aa19.45■□□□□ 0.7
NFIX-212ENST00000590027 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
NFIX-212ENST00000590027 RBM17Q96I25 401 aaKnown RBP19.45■□□□□ 0.7
NFIX-212ENST00000590027 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
NFIX-212ENST00000590027 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
NFIX-212ENST00000590027 SH3TC1Q8TE82 1336 aa19.45■□□□□ 0.7
NFIX-212ENST00000590027 ATP5J2-PTCD1G3V325 749 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 PPEF1O14829 653 aaPredicted RBP19.44■□□□□ 0.7
NFIX-212ENST00000590027 HSPA6P17066 643 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 GOLGA2Q08379 1002 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 NCBP3Q53F19 620 aaKnown RBP19.44■□□□□ 0.7
NFIX-212ENST00000590027 RTKN2Q8IZC4 609 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 CRAMP1Q96RY5 1269 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 ZNF277Q9NRM2 450 aaPredicted RBP19.44■□□□□ 0.7
NFIX-212ENST00000590027 SALL2Q9Y467 1007 aaPredicted RBP19.44■□□□□ 0.7
NFIX-212ENST00000590027 ABCC4O15439 1325 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 IL16Q14005 1332 aa19.44■□□□□ 0.7
NFIX-212ENST00000590027 TAF1P21675 1872 aa19.43■□□□□ 0.7
NFIX-212ENST00000590027 FAM9BQ8IZU0 186 aa19.43■□□□□ 0.7
NFIX-212ENST00000590027 CCDC30Q5VVM6 783 aa19.42■□□□□ 0.7
NFIX-212ENST00000590027 RIC3Q7Z5B4 369 aa19.42■□□□□ 0.7
NFIX-212ENST00000590027 RBM46Q8TBY0 533 aaKnown RBP19.42■□□□□ 0.7
NFIX-212ENST00000590027 FANCIQ9NVI1 1328 aa19.42■□□□□ 0.7
NFIX-212ENST00000590027 COL4A5P29400 1685 aa19.42■□□□□ 0.7
NFIX-212ENST00000590027 CEP350Q5VT06 3117 aa19.42■□□□□ 0.7
NFIX-212ENST00000590027 TCERG1O14776 1098 aaKnown RBP19.41■□□□□ 0.7
NFIX-212ENST00000590027 IARSP41252 1262 aaKnown RBP19.41■□□□□ 0.7
NFIX-212ENST00000590027 CC2D2BQ6DHV5 1058 aa19.41■□□□□ 0.7
NFIX-212ENST00000590027 PSMD1Q99460 953 aa19.41■□□□□ 0.7
NFIX-212ENST00000590027 LRRC37AA6NMS7 1700 aa19.41■□□□□ 0.7
NFIX-212ENST00000590027 TWISTNBQ3B726 338 aaPredicted RBP19.4■□□□□ 0.7
NFIX-212ENST00000590027 DPY19L2Q6NUT2 758 aa19.4■□□□□ 0.7
NFIX-212ENST00000590027 COL4A1P02462 1669 aa19.4■□□□□ 0.7
NFIX-212ENST00000590027 FAM89AQ96GI7 184 aa19.39■□□□□ 0.69
NFIX-212ENST00000590027 MYD88Q99836 296 aa19.39■□□□□ 0.69
NFIX-212ENST00000590027 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
NFIX-212ENST00000590027 ZNF541Q9H0D2 1346 aa19.39■□□□□ 0.69
NFIX-212ENST00000590027 POTECB2RU33 542 aa19.38■□□□□ 0.69
NFIX-212ENST00000590027 DDNO94850 711 aaPredicted RBP19.38■□□□□ 0.69
NFIX-212ENST00000590027 VEGFAP15692 232 aaPredicted RBP19.38■□□□□ 0.69
NFIX-212ENST00000590027 RTL5Q5HYW3 569 aaPredicted RBP19.38■□□□□ 0.69
NFIX-212ENST00000590027 WDR63Q8IWG1 891 aa19.38■□□□□ 0.69
NFIX-212ENST00000590027 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
NFIX-212ENST00000590027 TRIM28Q13263 835 aaKnown RBP19.37■□□□□ 0.69
NFIX-212ENST00000590027 DDX46Q7L014 1031 aaKnown RBP19.37■□□□□ 0.69
NFIX-212ENST00000590027 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
NFIX-212ENST00000590027 ATP6V0A2Q9Y487 856 aa19.37■□□□□ 0.69
NFIX-212ENST00000590027 SCN4AP35499 1836 aa19.37■□□□□ 0.69
NFIX-212ENST00000590027 DUOX1Q9NRD9 1551 aa19.36■□□□□ 0.69
NFIX-212ENST00000590027 CACNA1FO60840 1977 aa19.36■□□□□ 0.69
NFIX-212ENST00000590027 FSTL1Q12841 308 aa19.36■□□□□ 0.69
NFIX-212ENST00000590027 GRAPQ13588 217 aa19.36■□□□□ 0.69
NFIX-212ENST00000590027 GRAPLQ8TC17 118 aaPredicted RBP19.36■□□□□ 0.69
NFIX-212ENST00000590027 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
NFIX-212ENST00000590027 IRS4O14654 1257 aaPredicted RBP19.35■□□□□ 0.69
NFIX-212ENST00000590027 GRIPAP1Q4V328 841 aa19.35■□□□□ 0.69
NFIX-212ENST00000590027 SMC1BQ8NDV3 1235 aa19.35■□□□□ 0.69
NFIX-212ENST00000590027 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
NFIX-212ENST00000590027 SPINK5Q9NQ38 1064 aaPredicted RBP19.35■□□□□ 0.69
NFIX-212ENST00000590027 G2E3Q7L622 706 aa19.34■□□□□ 0.69
NFIX-212ENST00000590027 ZBTB38Q8NAP3 1195 aaPredicted RBP19.34■□□□□ 0.69
NFIX-212ENST00000590027 FZD9O00144 591 aa19.33■□□□□ 0.68
NFIX-212ENST00000590027 BBOX1O75936 387 aa19.33■□□□□ 0.68
NFIX-212ENST00000590027 APLP1P51693 650 aa19.33■□□□□ 0.68
NFIX-212ENST00000590027 EXOSC9Q06265 439 aaKnown RBP19.33■□□□□ 0.68
NFIX-212ENST00000590027 SF3B3Q15393 1217 aaKnown RBP19.33■□□□□ 0.68
NFIX-212ENST00000590027 CCDC191Q8NCU4 936 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms