RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 USP50Q70EL3 339 aaPredicted RBP20.92■□□□□ 0.94
LINC01140-209ENST00000589455 BEGAINQ9BUH8 593 aa20.91■□□□□ 0.94
LINC01140-209ENST00000589455 GJA3Q9Y6H8 435 aa20.91■□□□□ 0.94
LINC01140-209ENST00000589455 SCNN1DP51172 638 aa20.9■□□□□ 0.94
LINC01140-209ENST00000589455 CNGB1Q14028 1251 aaPredicted RBP20.9■□□□□ 0.94
LINC01140-209ENST00000589455 LARGE2Q8N3Y3 721 aa20.9■□□□□ 0.94
LINC01140-209ENST00000589455 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
LINC01140-209ENST00000589455 RPGRQ92834 1020 aaKnown RBP20.9■□□□□ 0.94
LINC01140-209ENST00000589455 CRAMP1Q96RY5 1269 aa20.9■□□□□ 0.94
LINC01140-209ENST00000589455 VPS33BQ9H267 617 aa20.9■□□□□ 0.94
LINC01140-209ENST00000589455 RIC1Q4ADV7 1423 aa20.89■□□□□ 0.94
LINC01140-209ENST00000589455 IBTKQ9P2D0 1353 aaPredicted RBP20.89■□□□□ 0.93
LINC01140-209ENST00000589455 CAPNS2Q96L46 248 aa20.89■□□□□ 0.93
LINC01140-209ENST00000589455 MAP3K15Q6ZN16 1313 aa20.88■□□□□ 0.93
LINC01140-209ENST00000589455 SLC34A2O95436 690 aa20.88■□□□□ 0.93
LINC01140-209ENST00000589455 MAP2K2P36507 400 aa20.88■□□□□ 0.93
LINC01140-209ENST00000589455 EPS15P42566 896 aa20.88■□□□□ 0.93
LINC01140-209ENST00000589455 DCTN1Q14203 1278 aa20.88■□□□□ 0.93
LINC01140-209ENST00000589455 NUTM1Q86Y26 1132 aa20.88■□□□□ 0.93
LINC01140-209ENST00000589455 RBM17Q96I25 401 aaKnown RBP20.88■□□□□ 0.93
LINC01140-209ENST00000589455 GPR101Q96P66 508 aaPredicted RBP20.88■□□□□ 0.93
LINC01140-209ENST00000589455 ABCC12Q96J65 1359 aa20.87■□□□□ 0.93
LINC01140-209ENST00000589455 KIF6Q6ZMV9 814 aa20.87■□□□□ 0.93
LINC01140-209ENST00000589455 CST9Q5W186 159 aa20.86■□□□□ 0.93
LINC01140-209ENST00000589455 TMX4Q9H1E5 349 aaPredicted RBP20.86■□□□□ 0.93
LINC01140-209ENST00000589455 TLL2Q9Y6L7 1015 aa20.86■□□□□ 0.93
LINC01140-209ENST00000589455 CACNA1SQ13698 1873 aa20.86■□□□□ 0.93
LINC01140-209ENST00000589455 RGS19P49795 217 aa20.85■□□□□ 0.93
LINC01140-209ENST00000589455 NIM1KQ8IY84 436 aa20.85■□□□□ 0.93
LINC01140-209ENST00000589455 PPEF1O14829 653 aaPredicted RBP20.84■□□□□ 0.93
LINC01140-209ENST00000589455 CA12O43570 354 aa20.84■□□□□ 0.93
LINC01140-209ENST00000589455 PPP2R1AP30153 589 aa20.84■□□□□ 0.93
LINC01140-209ENST00000589455 PAXIP1Q6ZW49 1069 aaPredicted RBP20.84■□□□□ 0.93
LINC01140-209ENST00000589455 ZNF34Q8IZ26 560 aa20.84■□□□□ 0.93
LINC01140-209ENST00000589455 NGEFQ8N5V2 710 aa20.84■□□□□ 0.93
LINC01140-209ENST00000589455 ADARB2Q9NS39 739 aaKnown RBP20.84■□□□□ 0.93
LINC01140-209ENST00000589455 MIS18AQ9NYP9 233 aa20.84■□□□□ 0.93
LINC01140-209ENST00000589455 FAM161AQ3B820 660 aa20.83■□□□□ 0.93
LINC01140-209ENST00000589455 SUSD4Q5VX71 490 aa20.83■□□□□ 0.93
LINC01140-209ENST00000589455 CYP4F22Q6NT55 531 aa20.83■□□□□ 0.93
LINC01140-209ENST00000589455 HHIPL1Q96JK4 782 aa20.83■□□□□ 0.93
LINC01140-209ENST00000589455 GPRC5DQ9NZD1 345 aa20.83■□□□□ 0.93
LINC01140-209ENST00000589455 RRP7AQ9Y3A4 280 aaKnown RBP20.83■□□□□ 0.93
LINC01140-209ENST00000589455 UBN2Q6ZU65 1347 aa20.82■□□□□ 0.92
LINC01140-209ENST00000589455 NEFMP07197 916 aa20.82■□□□□ 0.92
LINC01140-209ENST00000589455 EIF4A1P60842 406 aaKnown RBP20.82■□□□□ 0.92
LINC01140-209ENST00000589455 TTLL7Q6ZT98 887 aa20.82■□□□□ 0.92
LINC01140-209ENST00000589455 PPP1R42Q7Z4L9 355 aa20.82■□□□□ 0.92
LINC01140-209ENST00000589455 ATP6V0A2Q9Y487 856 aa20.82■□□□□ 0.92
LINC01140-209ENST00000589455 COL4A5P29400 1685 aa20.82■□□□□ 0.92
LINC01140-209ENST00000589455 ERBB4Q15303 1308 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 TRAF5O00463 557 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 PPIP5K2O43314 1243 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 NTSR2O95665 410 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 GPTP24298 496 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 MLLT1Q03111 559 aaPredicted RBP20.81■□□□□ 0.92
LINC01140-209ENST00000589455 FMR1Q06787 632 aaKnown RBP eCLIP20.81■□□□□ 0.92
LINC01140-209ENST00000589455 PARP10Q53GL7 1025 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 SLC10A5Q5PT55 438 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 GIGYF2Q6Y7W6 1299 aaKnown RBP20.81■□□□□ 0.92
LINC01140-209ENST00000589455 SUPT20HQ8NEM7 779 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 NLRP3Q96P20 1036 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 PGAP2Q9UHJ9 254 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 ZNRF3Q9ULT6 936 aa20.81■□□□□ 0.92
LINC01140-209ENST00000589455 SAPCD2Q86UD0 394 aa20.8■□□□□ 0.92
LINC01140-209ENST00000589455 ZC3H15Q8WU90 426 aaKnown RBP20.8■□□□□ 0.92
LINC01140-209ENST00000589455 RTFDC1Q9BY42 306 aaPredicted RBP20.8■□□□□ 0.92
LINC01140-209ENST00000589455 CDHR2Q9BYE9 1310 aa20.79■□□□□ 0.92
LINC01140-209ENST00000589455 CCDC85CA6NKD9 419 aa20.79■□□□□ 0.92
LINC01140-209ENST00000589455 ZBTB3Q9H5J0 574 aa20.79■□□□□ 0.92
LINC01140-209ENST00000589455 THSD7BQ9C0I4 1608 aa20.78■□□□□ 0.92
LINC01140-209ENST00000589455 BBOX1O75936 387 aa20.78■□□□□ 0.92
LINC01140-209ENST00000589455 MYL6BP14649 208 aa20.78■□□□□ 0.92
LINC01140-209ENST00000589455 CXCL9Q07325 125 aa20.78■□□□□ 0.92
LINC01140-209ENST00000589455 GRM1Q13255 1194 aa20.78■□□□□ 0.92
LINC01140-209ENST00000589455 LTBP1Q14766 1721 aa20.78■□□□□ 0.92
LINC01140-209ENST00000589455 TCERG1O14776 1098 aaKnown RBP20.77■□□□□ 0.92
LINC01140-209ENST00000589455 CELF2O95319 508 aaKnown RBP20.77■□□□□ 0.92
LINC01140-209ENST00000589455 BRPF1P55201 1214 aaPredicted RBP20.77■□□□□ 0.92
LINC01140-209ENST00000589455 AOC3Q16853 763 aa20.77■□□□□ 0.92
LINC01140-209ENST00000589455 C3orf67Q6ZVT6 689 aa20.76■□□□□ 0.91
LINC01140-209ENST00000589455 SP8Q8IXZ3 490 aa20.76■□□□□ 0.91
LINC01140-209ENST00000589455 UTP14AQ9BVJ6 771 aaKnown RBP20.76■□□□□ 0.91
LINC01140-209ENST00000589455 AOC2O75106 756 aa20.75■□□□□ 0.91
LINC01140-209ENST00000589455 TNIP1Q15025 636 aa20.75■□□□□ 0.91
LINC01140-209ENST00000589455 GMPSP49915 693 aaPredicted RBP20.74■□□□□ 0.91
LINC01140-209ENST00000589455 KIAA2012Q0VF49 1180 aa20.74■□□□□ 0.91
LINC01140-209ENST00000589455 CIAPIN1Q6FI81 312 aa20.74■□□□□ 0.91
LINC01140-209ENST00000589455 DPP8Q6V1X1 898 aaPredicted RBP20.74■□□□□ 0.91
LINC01140-209ENST00000589455 CDC37L1Q7L3B6 337 aa20.74■□□□□ 0.91
LINC01140-209ENST00000589455 NFE2L2Q16236 605 aa20.73■□□□□ 0.91
LINC01140-209ENST00000589455 PNNQ9H307 717 aaKnown RBP20.73■□□□□ 0.91
LINC01140-209ENST00000589455 ABCC4O15439 1325 aa20.73■□□□□ 0.91
LINC01140-209ENST00000589455 SLC51AQ86UW1 340 aa20.72■□□□□ 0.91
LINC01140-209ENST00000589455 MPNDQ8N594 471 aa20.72■□□□□ 0.91
LINC01140-209ENST00000589455 PLEKHF1Q96S99 279 aa20.72■□□□□ 0.91
LINC01140-209ENST00000589455 BCL2L13Q9BXK5 485 aa20.72■□□□□ 0.91
LINC01140-209ENST00000589455 GLIS2Q9BZE0 524 aaPredicted RBP20.72■□□□□ 0.91
LINC01140-209ENST00000589455 LAMB4A4D0S4 1761 aa20.72■□□□□ 0.91
LINC01140-209ENST00000589455 NOGQ13253 232 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms