RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 NYXQ9GZU5 481 aa15□□□□□ -0.01
RFX1-204ENST00000588885 DDX21Q9NR30 783 aaKnown RBP eCLIP15□□□□□ -0.01
RFX1-204ENST00000588885 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
RFX1-204ENST00000588885 CALD1Q05682 793 aaKnown RBP14.99□□□□□ -0.01
RFX1-204ENST00000588885 OLFM4Q6UX06 510 aa14.99□□□□□ -0.01
RFX1-204ENST00000588885 IFT57Q9NWB7 429 aa14.99□□□□□ -0.01
RFX1-204ENST00000588885 CEP350Q5VT06 3117 aa14.99□□□□□ -0.01
RFX1-204ENST00000588885 ABCC12Q96J65 1359 aa14.98□□□□□ -0.01
RFX1-204ENST00000588885 KLRG2A4D1S0 409 aaPredicted RBP14.98□□□□□ -0.01
RFX1-204ENST00000588885 C8orf58Q8NAV2 365 aa14.98□□□□□ -0.01
RFX1-204ENST00000588885 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
RFX1-204ENST00000588885 DICER1Q9UPY3 1922 aaKnown RBP14.98□□□□□ -0.01
RFX1-204ENST00000588885 COL11A2P13942 1736 aaPredicted RBP14.97□□□□□ -0.01
RFX1-204ENST00000588885 TOMM70O94826 608 aa14.97□□□□□ -0.01
RFX1-204ENST00000588885 NTSR2O95665 410 aa14.97□□□□□ -0.01
RFX1-204ENST00000588885 C3orf67Q6ZVT6 689 aa14.97□□□□□ -0.01
RFX1-204ENST00000588885 PPP1R42Q7Z4L9 355 aa14.97□□□□□ -0.01
RFX1-204ENST00000588885 TSR2Q969E8 191 aaKnown RBP14.97□□□□□ -0.01
RFX1-204ENST00000588885 UTP14AQ9BVJ6 771 aaKnown RBP14.97□□□□□ -0.01
RFX1-204ENST00000588885 RRAGCQ9HB90 399 aa14.97□□□□□ -0.01
RFX1-204ENST00000588885 DBF4Q9UBU7 674 aaPredicted RBP14.97□□□□□ -0.01
RFX1-204ENST00000588885 TCERG1O14776 1098 aaKnown RBP14.96□□□□□ -0.01
RFX1-204ENST00000588885 HOXB7P09629 217 aa14.96□□□□□ -0.01
RFX1-204ENST00000588885 PARP10Q53GL7 1025 aa14.96□□□□□ -0.01
RFX1-204ENST00000588885 SYNE4Q8N205 404 aa14.96□□□□□ -0.01
RFX1-204ENST00000588885 TAOK3Q9H2K8 898 aa14.96□□□□□ -0.01
RFX1-204ENST00000588885 WDR90Q96KV7 1748 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 APLP1P51693 650 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 TCIRG1Q13488 830 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 ANKRD13DQ6ZTN6 518 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 WWC1Q8IX03 1113 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 FAM9BQ8IZU0 186 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 C7orf43Q8WVR3 580 aa14.95□□□□□ -0.02
RFX1-204ENST00000588885 RPGRQ92834 1020 aaKnown RBP14.95□□□□□ -0.02
RFX1-204ENST00000588885 ARFGEF2Q9Y6D5 1785 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 ATP5J2-PTCD1G3V325 749 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 HCLS1P14317 486 aaPredicted RBP14.94□□□□□ -0.02
RFX1-204ENST00000588885 ALDH1B1P30837 517 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 HSP90AB3PQ58FF7 597 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 SAMD1Q6SPF0 538 aaPredicted RBP14.94□□□□□ -0.02
RFX1-204ENST00000588885 NLRP10Q86W26 655 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 TSPYL6Q8N831 410 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 PHAXQ9H814 394 aaKnown RBP14.94□□□□□ -0.02
RFX1-204ENST00000588885 HYPKQ9NX55 129 aa14.94□□□□□ -0.02
RFX1-204ENST00000588885 TRMT112Q9UI30 125 aaKnown RBP14.94□□□□□ -0.02
RFX1-204ENST00000588885 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 CRY2Q49AN0 593 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 CCDC93Q567U6 631 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 SLC51AQ86UW1 340 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 RBM17Q96I25 401 aaKnown RBP14.93□□□□□ -0.02
RFX1-204ENST00000588885 NLRP3Q96P20 1036 aa14.93□□□□□ -0.02
RFX1-204ENST00000588885 ZNF277Q9NRM2 450 aaPredicted RBP14.93□□□□□ -0.02
RFX1-204ENST00000588885 NUP98P52948 1817 aa14.92□□□□□ -0.02
RFX1-204ENST00000588885 SLX4Q8IY92 1834 aa14.92□□□□□ -0.02
RFX1-204ENST00000588885 RBM46Q8TBY0 533 aaKnown RBP14.92□□□□□ -0.02
RFX1-204ENST00000588885 GLTPD2A6NH11 291 aa14.91□□□□□ -0.02
RFX1-204ENST00000588885 CCDC27Q2M243 656 aa14.91□□□□□ -0.02
RFX1-204ENST00000588885 RTL5Q5HYW3 569 aaPredicted RBP14.91□□□□□ -0.02
RFX1-204ENST00000588885 SLC10A5Q5PT55 438 aa14.91□□□□□ -0.02
RFX1-204ENST00000588885 RIC3Q7Z5B4 369 aa14.91□□□□□ -0.02
RFX1-204ENST00000588885 RTKN2Q8IZC4 609 aa14.91□□□□□ -0.02
RFX1-204ENST00000588885 ZC3H4Q9UPT8 1303 aaKnown RBP14.91□□□□□ -0.02
RFX1-204ENST00000588885 IBTKQ9P2D0 1353 aaPredicted RBP14.9□□□□□ -0.02
RFX1-204ENST00000588885 HOXA10P31260 410 aaPredicted RBP14.9□□□□□ -0.02
RFX1-204ENST00000588885 FKBP4Q02790 459 aaKnown RBP eCLIP14.9□□□□□ -0.02
RFX1-204ENST00000588885 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
RFX1-204ENST00000588885 FAM89AQ96GI7 184 aa14.9□□□□□ -0.02
RFX1-204ENST00000588885 LTBP3Q9NS15 1303 aa14.9□□□□□ -0.02
RFX1-204ENST00000588885 PPEF1O14829 653 aaPredicted RBP14.89□□□□□ -0.03
RFX1-204ENST00000588885 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
RFX1-204ENST00000588885 DPY19L2Q6NUT2 758 aa14.89□□□□□ -0.03
RFX1-204ENST00000588885 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
RFX1-204ENST00000588885 CRAMP1Q96RY5 1269 aa14.89□□□□□ -0.03
RFX1-204ENST00000588885 ISCA1Q9BUE6 129 aa14.89□□□□□ -0.03
RFX1-204ENST00000588885 SH3TC1Q8TE82 1336 aa14.89□□□□□ -0.03
RFX1-204ENST00000588885 DDNO94850 711 aaPredicted RBP14.88□□□□□ -0.03
RFX1-204ENST00000588885 MYD88Q99836 296 aa14.88□□□□□ -0.03
RFX1-204ENST00000588885 VEGFAP15692 232 aaPredicted RBP14.87□□□□□ -0.03
RFX1-204ENST00000588885 FSTL1Q12841 308 aa14.87□□□□□ -0.03
RFX1-204ENST00000588885 TWISTNBQ3B726 338 aaPredicted RBP14.87□□□□□ -0.03
RFX1-204ENST00000588885 SMC1BQ8NDV3 1235 aa14.87□□□□□ -0.03
RFX1-204ENST00000588885 JARID2Q92833 1246 aaPredicted RBP14.87□□□□□ -0.03
RFX1-204ENST00000588885 ABCC4O15439 1325 aa14.86□□□□□ -0.03
RFX1-204ENST00000588885 POTECB2RU33 542 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 IARSP41252 1262 aaKnown RBP14.85□□□□□ -0.03
RFX1-204ENST00000588885 DDX46Q7L014 1031 aaKnown RBP14.85□□□□□ -0.03
RFX1-204ENST00000588885 WDR63Q8IWG1 891 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 TMX4Q9H1E5 349 aaPredicted RBP14.85□□□□□ -0.03
RFX1-204ENST00000588885 MAP3K2Q9Y2U5 619 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 IL16Q14005 1332 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 RNF123Q5XPI4 1314 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 FANCIQ9NVI1 1328 aa14.85□□□□□ -0.03
RFX1-204ENST00000588885 IRS4O14654 1257 aaPredicted RBP14.84□□□□□ -0.03
RFX1-204ENST00000588885 DDX58O95786 925 aaKnown RBP14.84□□□□□ -0.03
RFX1-204ENST00000588885 EXOSC9Q06265 439 aaKnown RBP14.84□□□□□ -0.03
RFX1-204ENST00000588885 CC2D2BQ6DHV5 1058 aa14.84□□□□□ -0.03
RFX1-204ENST00000588885 G2E3Q7L622 706 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms