RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 RNF123Q5XPI4 1314 aa24.98■■□□□ 1.59
CCDC130-209ENST00000588809 HSP90AB3PQ58FF7 597 aa24.98■■□□□ 1.59
CCDC130-209ENST00000588809 PPP1R42Q7Z4L9 355 aa24.98■■□□□ 1.59
CCDC130-209ENST00000588809 GLTPD2A6NH11 291 aa24.97■■□□□ 1.59
CCDC130-209ENST00000588809 HOXA10P31260 410 aaPredicted RBP24.97■■□□□ 1.59
CCDC130-209ENST00000588809 CCDC93Q567U6 631 aa24.97■■□□□ 1.59
CCDC130-209ENST00000588809 DUSP27Q5VZP5 1158 aa24.97■■□□□ 1.59
CCDC130-209ENST00000588809 DBF4Q9UBU7 674 aaPredicted RBP24.97■■□□□ 1.59
CCDC130-209ENST00000588809 ANP32CO43423 234 aa24.96■■□□□ 1.59
CCDC130-209ENST00000588809 AIMP1Q12904 312 aaKnown RBP24.96■■□□□ 1.59
CCDC130-209ENST00000588809 CACNA1FO60840 1977 aa24.95■■□□□ 1.58
CCDC130-209ENST00000588809 HSPA6P17066 643 aa24.95■■□□□ 1.58
CCDC130-209ENST00000588809 CCDC27Q2M243 656 aa24.95■■□□□ 1.58
CCDC130-209ENST00000588809 TCIRG1Q13488 830 aa24.94■■□□□ 1.58
CCDC130-209ENST00000588809 SLC10A5Q5PT55 438 aa24.94■■□□□ 1.58
CCDC130-209ENST00000588809 UTP14AQ9BVJ6 771 aaKnown RBP24.94■■□□□ 1.58
CCDC130-209ENST00000588809 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
CCDC130-209ENST00000588809 NLRP10Q86W26 655 aa24.93■■□□□ 1.58
CCDC130-209ENST00000588809 RBM46Q8TBY0 533 aaKnown RBP24.93■■□□□ 1.58
CCDC130-209ENST00000588809 RRAGCQ9HB90 399 aa24.93■■□□□ 1.58
CCDC130-209ENST00000588809 MRS2Q9HD23 443 aa24.93■■□□□ 1.58
CCDC130-209ENST00000588809 HYPKQ9NX55 129 aa24.93■■□□□ 1.58
CCDC130-209ENST00000588809 TAF1P21675 1872 aa24.93■■□□□ 1.58
CCDC130-209ENST00000588809 SCN4AP35499 1836 aa24.92■■□□□ 1.58
CCDC130-209ENST00000588809 FKBP4Q02790 459 aaKnown RBP eCLIP24.92■■□□□ 1.58
CCDC130-209ENST00000588809 RTKN2Q8IZC4 609 aa24.92■■□□□ 1.58
CCDC130-209ENST00000588809 PLBD2Q8NHP8 589 aa24.92■■□□□ 1.58
CCDC130-209ENST00000588809 RPGRQ92834 1020 aaKnown RBP24.92■■□□□ 1.58
CCDC130-209ENST00000588809 CRAMP1Q96RY5 1269 aa24.91■■□□□ 1.58
CCDC130-209ENST00000588809 OLFM4Q6UX06 510 aa24.9■■□□□ 1.58
CCDC130-209ENST00000588809 ANKRD13DQ6ZTN6 518 aa24.9■■□□□ 1.58
CCDC130-209ENST00000588809 C3orf67Q6ZVT6 689 aa24.9■■□□□ 1.58
CCDC130-209ENST00000588809 C16orf71Q8IYS4 520 aaPredicted RBP24.9■■□□□ 1.58
CCDC130-209ENST00000588809 CC2D2BQ6DHV5 1058 aa24.89■■□□□ 1.58
CCDC130-209ENST00000588809 NLRP3Q96P20 1036 aa24.89■■□□□ 1.58
CCDC130-209ENST00000588809 DPY19L2Q6NUT2 758 aa24.88■■□□□ 1.57
CCDC130-209ENST00000588809 WWC1Q8IX03 1113 aa24.88■■□□□ 1.57
CCDC130-209ENST00000588809 C8orf58Q8NAV2 365 aa24.88■■□□□ 1.57
CCDC130-209ENST00000588809 LRRC37AA6NMS7 1700 aa24.87■■□□□ 1.57
CCDC130-209ENST00000588809 VEGFAP15692 232 aaPredicted RBP24.87■■□□□ 1.57
CCDC130-209ENST00000588809 RBM17Q96I25 401 aaKnown RBP24.87■■□□□ 1.57
CCDC130-209ENST00000588809 PSMD1Q99460 953 aa24.87■■□□□ 1.57
CCDC130-209ENST00000588809 ISCA1Q9BUE6 129 aa24.87■■□□□ 1.57
CCDC130-209ENST00000588809 SH3TC1Q8TE82 1336 aa24.86■■□□□ 1.57
CCDC130-209ENST00000588809 FSTL1Q12841 308 aa24.86■■□□□ 1.57
CCDC130-209ENST00000588809 GRIPAP1Q4V328 841 aa24.86■■□□□ 1.57
CCDC130-209ENST00000588809 CHMP4AQ9BY43 222 aa24.86■■□□□ 1.57
CCDC130-209ENST00000588809 TRMT112Q9UI30 125 aaKnown RBP24.86■■□□□ 1.57
CCDC130-209ENST00000588809 IL16Q14005 1332 aa24.86■■□□□ 1.57
CCDC130-209ENST00000588809 POTECB2RU33 542 aa24.85■■□□□ 1.57
CCDC130-209ENST00000588809 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
CCDC130-209ENST00000588809 ZNF277Q9NRM2 450 aaPredicted RBP24.85■■□□□ 1.57
CCDC130-209ENST00000588809 TRIM28Q13263 835 aaKnown RBP24.84■■□□□ 1.57
CCDC130-209ENST00000588809 SYNE4Q8N205 404 aa24.84■■□□□ 1.57
CCDC130-209ENST00000588809 PCNTO95613 3336 aa24.83■■□□□ 1.57
CCDC130-209ENST00000588809 COL4A5P29400 1685 aa24.83■■□□□ 1.57
CCDC130-209ENST00000588809 PPEF1O14829 653 aaPredicted RBP24.83■■□□□ 1.57
CCDC130-209ENST00000588809 ABCC4O15439 1325 aa24.83■■□□□ 1.56
CCDC130-209ENST00000588809 MYH3P11055 1940 aa24.82■■□□□ 1.56
CCDC130-209ENST00000588809 HCLS1P14317 486 aaPredicted RBP24.82■■□□□ 1.56
CCDC130-209ENST00000588809 IARSP41252 1262 aaKnown RBP24.82■■□□□ 1.56
CCDC130-209ENST00000588809 APLP1P51693 650 aa24.82■■□□□ 1.56
CCDC130-209ENST00000588809 CCDC30Q5VVM6 783 aa24.82■■□□□ 1.56
CCDC130-209ENST00000588809 TSPYL6Q8N831 410 aa24.82■■□□□ 1.56
CCDC130-209ENST00000588809 TSR2Q969E8 191 aaKnown RBP24.82■■□□□ 1.56
CCDC130-209ENST00000588809 PHAXQ9H814 394 aaKnown RBP24.82■■□□□ 1.56
CCDC130-209ENST00000588809 GOLGA2Q08379 1002 aa24.81■■□□□ 1.56
CCDC130-209ENST00000588809 DDNO94850 711 aaPredicted RBP24.8■■□□□ 1.56
CCDC130-209ENST00000588809 SMC1BQ8NDV3 1235 aa24.8■■□□□ 1.56
CCDC130-209ENST00000588809 L3MBTL3Q96JM7 780 aaPredicted RBP24.8■■□□□ 1.56
CCDC130-209ENST00000588809 ATP5J2-PTCD1G3V325 749 aa24.79■■□□□ 1.56
CCDC130-209ENST00000588809 RIC3Q7Z5B4 369 aa24.79■■□□□ 1.56
CCDC130-209ENST00000588809 ATP6V0A2Q9Y487 856 aa24.79■■□□□ 1.56
CCDC130-209ENST00000588809 FZD9O00144 591 aa24.78■■□□□ 1.56
CCDC130-209ENST00000588809 SLC51AQ86UW1 340 aa24.78■■□□□ 1.56
CCDC130-209ENST00000588809 BBOX1O75936 387 aa24.77■■□□□ 1.56
CCDC130-209ENST00000588809 FAM89AQ96GI7 184 aa24.77■■□□□ 1.56
CCDC130-209ENST00000588809 ZNF541Q9H0D2 1346 aa24.77■■□□□ 1.56
CCDC130-209ENST00000588809 LTBP1Q14766 1721 aa24.77■■□□□ 1.56
CCDC130-209ENST00000588809 ADAMTSL1Q8N6G6 1762 aa24.77■■□□□ 1.56
CCDC130-209ENST00000588809 DDX46Q7L014 1031 aaKnown RBP24.76■■□□□ 1.55
CCDC130-209ENST00000588809 WDR63Q8IWG1 891 aa24.76■■□□□ 1.55
CCDC130-209ENST00000588809 DUOX1Q9NRD9 1551 aa24.76■■□□□ 1.55
CCDC130-209ENST00000588809 COL4A1P02462 1669 aa24.75■■□□□ 1.55
CCDC130-209ENST00000588809 GRAPQ13588 217 aa24.75■■□□□ 1.55
CCDC130-209ENST00000588809 SF3B3Q15393 1217 aaKnown RBP24.75■■□□□ 1.55
CCDC130-209ENST00000588809 TWISTNBQ3B726 338 aaPredicted RBP24.75■■□□□ 1.55
CCDC130-209ENST00000588809 GRAPLQ8TC17 118 aaPredicted RBP24.75■■□□□ 1.55
CCDC130-209ENST00000588809 DDX58O95786 925 aaKnown RBP24.74■■□□□ 1.55
CCDC130-209ENST00000588809 SP8Q8IXZ3 490 aa24.74■■□□□ 1.55
CCDC130-209ENST00000588809 CCDC191Q8NCU4 936 aa24.74■■□□□ 1.55
CCDC130-209ENST00000588809 JDP2Q8WYK2 163 aa24.74■■□□□ 1.55
CCDC130-209ENST00000588809 ZNF428Q96B54 188 aa24.74■■□□□ 1.55
CCDC130-209ENST00000588809 RTFDC1Q9BY42 306 aaPredicted RBP24.74■■□□□ 1.55
CCDC130-209ENST00000588809 TMX4Q9H1E5 349 aaPredicted RBP24.74■■□□□ 1.55
CCDC130-209ENST00000588809 FANCIQ9NVI1 1328 aa24.74■■□□□ 1.55
CCDC130-209ENST00000588809 IQCA1LA6NCM1 817 aa24.73■■□□□ 1.55
CCDC130-209ENST00000588809 TCERG1O14776 1098 aaKnown RBP24.73■■□□□ 1.55
CCDC130-209ENST00000588809 TMC4Q7Z404 712 aa24.73■■□□□ 1.55
CCDC130-209ENST00000588809 ZBTB38Q8NAP3 1195 aaPredicted RBP24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms