RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
PTPRS-206ENST00000588552 CBFA2T2O43439 604 aa18.1■□□□□ 0.49
PTPRS-206ENST00000588552 NCOA7Q8NI08 942 aa18.1■□□□□ 0.49
PTPRS-206ENST00000588552 ZFYP08048 801 aaPredicted RBP18.09■□□□□ 0.49
PTPRS-206ENST00000588552 DHX8Q14562 1220 aaKnown RBP18.09■□□□□ 0.49
PTPRS-206ENST00000588552 RLBP1P12271 317 aa18.09■□□□□ 0.49
PTPRS-206ENST00000588552 LTKP29376 864 aa18.09■□□□□ 0.49
PTPRS-206ENST00000588552 CAMK4Q16566 473 aa18.09■□□□□ 0.49
PTPRS-206ENST00000588552 NYXQ9GZU5 481 aa18.09■□□□□ 0.49
PTPRS-206ENST00000588552 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
PTPRS-206ENST00000588552 RTCBQ9Y3I0 505 aaKnown RBP18.09■□□□□ 0.49
PTPRS-206ENST00000588552 TSPY2A6NKD2 308 aa18.09■□□□□ 0.49
PTPRS-206ENST00000588552 GSTO1P78417 241 aa18.09■□□□□ 0.49
PTPRS-206ENST00000588552 CRNKL1Q9BZJ0 848 aaKnown RBP18.09■□□□□ 0.49
PTPRS-206ENST00000588552 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
PTPRS-206ENST00000588552 CEP85Q6P2H3 762 aa18.08■□□□□ 0.48
PTPRS-206ENST00000588552 USP16Q9Y5T5 823 aa18.08■□□□□ 0.48
PTPRS-206ENST00000588552 IQSEC3Q9UPP2 1182 aaPredicted RBP18.08■□□□□ 0.48
PTPRS-206ENST00000588552 GJB2P29033 226 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 NLRP5P59047 1200 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 TBC1D32Q96NH3 1257 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 GCC2Q8IWJ2 1684 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 IRS4O14654 1257 aaPredicted RBP18.07■□□□□ 0.48
PTPRS-206ENST00000588552 TPTE2Q6XPS3 522 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
PTPRS-206ENST00000588552 DDX21Q9NR30 783 aaKnown RBP eCLIP18.07■□□□□ 0.48
PTPRS-206ENST00000588552 SYCE3A1L190 88 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 SMTNL1A8MU46 457 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 SSFA2P28290 1259 aa18.07■□□□□ 0.48
PTPRS-206ENST00000588552 SLC4A8Q2Y0W8 1093 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 ZNF790Q6PG37 636 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 CYP7A1P22680 504 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 RUFY1Q96T51 708 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 CDCA7Q9BWT1 371 aaPredicted RBP18.06■□□□□ 0.48
PTPRS-206ENST00000588552 PTPRTO14522 1441 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 HLA-DOAP06340 250 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 IARSP41252 1262 aaKnown RBP18.06■□□□□ 0.48
PTPRS-206ENST00000588552 CFAP65Q6ZU64 1925 aaKnown RBP18.06■□□□□ 0.48
PTPRS-206ENST00000588552 CCDC194A0A1B0GVG4 234 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 PLEKHG3A1L390 1219 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 KIF5BP33176 963 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 TNIP1Q15025 636 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 MICU3Q86XE3 530 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 MPNDQ8N594 471 aa18.06■□□□□ 0.48
PTPRS-206ENST00000588552 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 DCTPP1Q9H773 170 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 KAT14Q9H8E8 782 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 PDCL3Q9H2J4 239 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 ZGPATQ8N5A5 531 aaKnown RBP18.05■□□□□ 0.48
PTPRS-206ENST00000588552 ESYT1Q9BSJ8 1104 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 MCM5P33992 734 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 METAP2P50579 478 aaKnown RBP eCLIP18.05■□□□□ 0.483e-6■■■□□ 15.2
PTPRS-206ENST00000588552 MCMDC2Q4G0Z9 681 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 DDX17Q92841 729 aaKnown RBP18.05■□□□□ 0.48
PTPRS-206ENST00000588552 CUL5Q93034 780 aa18.05■□□□□ 0.48
PTPRS-206ENST00000588552 SLAIN2Q9P270 581 aa18.04■□□□□ 0.48
PTPRS-206ENST00000588552 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
PTPRS-206ENST00000588552 ARHGEF10O15013 1369 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 TTLL12Q14166 644 aaPredicted RBP18.03■□□□□ 0.48
PTPRS-206ENST00000588552 SLC9C2Q5TAH2 1124 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 LUC7LQ9NQ29 371 aaKnown RBP18.03■□□□□ 0.48
PTPRS-206ENST00000588552 SLC4A4Q9Y6R1 1079 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 TTC41PQ6P2S7 1318 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 STX6O43752 255 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 RAB11FIP4Q86YS3 637 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 TNPO1Q92973 898 aaKnown RBP18.03■□□□□ 0.48
PTPRS-206ENST00000588552 CABP5Q9NP86 173 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 ORC3Q9UBD5 711 aaPredicted RBP18.03■□□□□ 0.48
PTPRS-206ENST00000588552 PAG1Q9NWQ8 432 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 SAMD9LQ8IVG5 1584 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 G2E3Q7L622 706 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 ACBD3Q9H3P7 528 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 LGR6Q9HBX8 967 aa18.03■□□□□ 0.48
PTPRS-206ENST00000588552 RBM8AQ9Y5S9 174 aaKnown RBP18.03■□□□□ 0.48
PTPRS-206ENST00000588552 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.48
PTPRS-206ENST00000588552 RAB34Q9BZG1 259 aa18.02■□□□□ 0.48
PTPRS-206ENST00000588552 CCDC183Q5T5S1 534 aa18.02■□□□□ 0.48
PTPRS-206ENST00000588552 NAA16Q6N069 864 aaPredicted RBP18.02■□□□□ 0.48
PTPRS-206ENST00000588552 CCDC12Q8WUD4 166 aaPredicted RBP18.02■□□□□ 0.47
PTPRS-206ENST00000588552 BRF1Q92994 677 aa18.02■□□□□ 0.47
PTPRS-206ENST00000588552 PLXNC1O60486 1568 aa18.02■□□□□ 0.47
PTPRS-206ENST00000588552 TFCP2Q12800 502 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 FEZ1Q99689 392 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 KRT23Q9C075 422 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 BRPF3Q9ULD4 1205 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 TMEM266Q2M3C6 531 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 ZNF804AQ7Z570 1209 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 VAT1LQ9HCJ6 419 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 TRIM35Q9UPQ4 493 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
PTPRS-206ENST00000588552 CHL1O00533 1208 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
PTPRS-206ENST00000588552 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
PTPRS-206ENST00000588552 MYO1BO43795 1136 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 FILIP1Q7Z7B0 1213 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 SLC26A6Q9BXS9 759 aa18■□□□□ 0.47
PTPRS-206ENST00000588552 GNPATO15228 680 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms