RNA–Protein interactions for RNA: ENST00000588459.1

RPRD1A-206, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-206ENST00000588459 TCIRG1Q13488 830 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 FAM9BQ8IZU0 186 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 UTP14AQ9BVJ6 771 aaKnown RBP17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 DICER1Q9UPY3 1922 aaKnown RBP17.78■□□□□ 0.44
RPRD1A-206ENST00000588459 SOGA3Q5TF21 947 aa17.77■□□□□ 0.44
RPRD1A-206ENST00000588459 NLRP10Q86W26 655 aa17.77■□□□□ 0.44
RPRD1A-206ENST00000588459 TSPYL6Q8N831 410 aa17.77■□□□□ 0.44
RPRD1A-206ENST00000588459 PLBD2Q8NHP8 589 aa17.77■□□□□ 0.44
RPRD1A-206ENST00000588459 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
RPRD1A-206ENST00000588459 LAMB2P55268 1798 aa17.76■□□□□ 0.43
RPRD1A-206ENST00000588459 ALDH1B1P30837 517 aa17.76■□□□□ 0.43
RPRD1A-206ENST00000588459 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
RPRD1A-206ENST00000588459 ANKRD13DQ6ZTN6 518 aa17.76■□□□□ 0.43
RPRD1A-206ENST00000588459 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
RPRD1A-206ENST00000588459 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
RPRD1A-206ENST00000588459 LTBP3Q9NS15 1303 aa17.75■□□□□ 0.43
RPRD1A-206ENST00000588459 ZC3H4Q9UPT8 1303 aaKnown RBP17.75■□□□□ 0.43
RPRD1A-206ENST00000588459 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
RPRD1A-206ENST00000588459 TRMT112Q9UI30 125 aaKnown RBP17.75■□□□□ 0.43
RPRD1A-206ENST00000588459 ATP5J2-PTCD1G3V325 749 aa17.74■□□□□ 0.43
RPRD1A-206ENST00000588459 HCLS1P14317 486 aaPredicted RBP17.74■□□□□ 0.43
RPRD1A-206ENST00000588459 SLC51AQ86UW1 340 aa17.74■□□□□ 0.43
RPRD1A-206ENST00000588459 GOLGA2Q08379 1002 aa17.73■□□□□ 0.43
RPRD1A-206ENST00000588459 RBM17Q96I25 401 aaKnown RBP17.73■□□□□ 0.43
RPRD1A-206ENST00000588459 NLRP3Q96P20 1036 aa17.73■□□□□ 0.43
RPRD1A-206ENST00000588459 RRAGCQ9HB90 399 aa17.73■□□□□ 0.43
RPRD1A-206ENST00000588459 IL16Q14005 1332 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 DDX60Q8IY21 1712 aaKnown RBP17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 RIC3Q7Z5B4 369 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
RPRD1A-206ENST00000588459 GLTPD2A6NH11 291 aa17.71■□□□□ 0.43
RPRD1A-206ENST00000588459 PPEF1O14829 653 aaPredicted RBP17.71■□□□□ 0.43
RPRD1A-206ENST00000588459 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
RPRD1A-206ENST00000588459 ZNF277Q9NRM2 450 aaPredicted RBP17.71■□□□□ 0.43
RPRD1A-206ENST00000588459 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.42
RPRD1A-206ENST00000588459 CEP350Q5VT06 3117 aa17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 TWISTNBQ3B726 338 aaPredicted RBP17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 CRAMP1Q96RY5 1269 aa17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 SNED1Q8TER0 1413 aa17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 ABCC4O15439 1325 aa17.7■□□□□ 0.42
RPRD1A-206ENST00000588459 TAF1P21675 1872 aa17.69■□□□□ 0.42
RPRD1A-206ENST00000588459 TOMM70O94826 608 aa17.69■□□□□ 0.42
RPRD1A-206ENST00000588459 RTL5Q5HYW3 569 aaPredicted RBP17.69■□□□□ 0.42
RPRD1A-206ENST00000588459 WDR63Q8IWG1 891 aa17.69■□□□□ 0.42
RPRD1A-206ENST00000588459 FAM89AQ96GI7 184 aa17.69■□□□□ 0.42
RPRD1A-206ENST00000588459 MYD88Q99836 296 aa17.69■□□□□ 0.42
RPRD1A-206ENST00000588459 STK31Q9BXU1 1019 aa17.68■□□□□ 0.42
RPRD1A-206ENST00000588459 WDR90Q96KV7 1748 aa17.67■□□□□ 0.42
RPRD1A-206ENST00000588459 DPY19L2Q6NUT2 758 aa17.67■□□□□ 0.42
RPRD1A-206ENST00000588459 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
RPRD1A-206ENST00000588459 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
RPRD1A-206ENST00000588459 DDX58O95786 925 aaKnown RBP17.66■□□□□ 0.42
RPRD1A-206ENST00000588459 HSPA6P17066 643 aa17.66■□□□□ 0.42
RPRD1A-206ENST00000588459 IARSP41252 1262 aaKnown RBP17.66■□□□□ 0.42
RPRD1A-206ENST00000588459 PSMD1Q99460 953 aa17.66■□□□□ 0.42
RPRD1A-206ENST00000588459 DDNO94850 711 aaPredicted RBP17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 TRIM28Q13263 835 aaKnown RBP17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 CC2D2BQ6DHV5 1058 aa17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 DDX46Q7L014 1031 aaKnown RBP17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 G2E3Q7L622 706 aa17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 RBM46Q8TBY0 533 aaKnown RBP17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 MAP3K2Q9Y2U5 619 aa17.65■□□□□ 0.42
RPRD1A-206ENST00000588459 COL4A5P29400 1685 aa17.64■□□□□ 0.42
RPRD1A-206ENST00000588459 POTECB2RU33 542 aa17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 SLC4A2P04920 1241 aa17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 VEGFAP15692 232 aaPredicted RBP17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 METTL22Q9BUU2 404 aaPredicted RBP17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 COL4A1P02462 1669 aa17.64■□□□□ 0.41
RPRD1A-206ENST00000588459 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
RPRD1A-206ENST00000588459 GRAPQ13588 217 aa17.63■□□□□ 0.41
RPRD1A-206ENST00000588459 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
RPRD1A-206ENST00000588459 GRAPLQ8TC17 118 aaPredicted RBP17.63■□□□□ 0.41
RPRD1A-206ENST00000588459 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
RPRD1A-206ENST00000588459 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
RPRD1A-206ENST00000588459 CCDC191Q8NCU4 936 aa17.62■□□□□ 0.41
RPRD1A-206ENST00000588459 TMX4Q9H1E5 349 aaPredicted RBP17.62■□□□□ 0.41
RPRD1A-206ENST00000588459 CWC25Q9NXE8 425 aaPredicted RBP17.62■□□□□ 0.41
RPRD1A-206ENST00000588459 VAMP4O75379 141 aa17.61■□□□□ 0.41
RPRD1A-206ENST00000588459 BBOX1O75936 387 aa17.61■□□□□ 0.41
RPRD1A-206ENST00000588459 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
RPRD1A-206ENST00000588459 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms