RNA–Protein interactions for RNA: ENST00000588337.5

KDM4B-205, Transcript of lysine demethylase 4B, humanhuman

TSL 5

Gene KDM4B, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-205ENST00000588337 ANP32CO43423 234 aa34.95■■■■□ 3.19
KDM4B-205ENST00000588337 GLTPD2A6NH11 291 aa34.94■■■■□ 3.18
KDM4B-205ENST00000588337 ALDH1B1P30837 517 aa34.94■■■■□ 3.18
KDM4B-205ENST00000588337 RRAGCQ9HB90 399 aa34.94■■■■□ 3.18
KDM4B-205ENST00000588337 HSPA6P17066 643 aa34.93■■■■□ 3.18
KDM4B-205ENST00000588337 HSP90AB3PQ58FF7 597 aa34.93■■■■□ 3.18
KDM4B-205ENST00000588337 OLFM4Q6UX06 510 aa34.93■■■■□ 3.18
KDM4B-205ENST00000588337 DBF4Q9UBU7 674 aaPredicted RBP34.93■■■■□ 3.18
KDM4B-205ENST00000588337 UTP14AQ9BVJ6 771 aaKnown RBP34.92■■■■□ 3.18
KDM4B-205ENST00000588337 MRS2Q9HD23 443 aa34.92■■■■□ 3.18
KDM4B-205ENST00000588337 RPGRQ92834 1020 aaKnown RBP34.91■■■■□ 3.18
KDM4B-205ENST00000588337 WDR90Q96KV7 1748 aa34.91■■■■□ 3.18
KDM4B-205ENST00000588337 C3orf67Q6ZVT6 689 aa34.9■■■■□ 3.18
KDM4B-205ENST00000588337 C16orf71Q8IYS4 520 aaPredicted RBP34.9■■■■□ 3.18
KDM4B-205ENST00000588337 SNED1Q8TER0 1413 aa34.89■■■■□ 3.18
KDM4B-205ENST00000588337 HOXA10P31260 410 aaPredicted RBP34.89■■■■□ 3.18
KDM4B-205ENST00000588337 TCIRG1Q13488 830 aa34.89■■■■□ 3.18
KDM4B-205ENST00000588337 NLRP10Q86W26 655 aa34.89■■■■□ 3.18
KDM4B-205ENST00000588337 RNF123Q5XPI4 1314 aa34.88■■■■□ 3.17
KDM4B-205ENST00000588337 RBM46Q8TBY0 533 aaKnown RBP34.88■■■■□ 3.17
KDM4B-205ENST00000588337 FKBP4Q02790 459 aaKnown RBP eCLIP34.87■■■■□ 3.17
KDM4B-205ENST00000588337 HYPKQ9NX55 129 aa34.87■■■■□ 3.17
KDM4B-205ENST00000588337 RTKN2Q8IZC4 609 aa34.86■■■■□ 3.17
KDM4B-205ENST00000588337 PLBD2Q8NHP8 589 aa34.86■■■■□ 3.17
KDM4B-205ENST00000588337 ELL2O00472 640 aaPredicted RBP34.85■■■■□ 3.17
KDM4B-205ENST00000588337 CCDC27Q2M243 656 aa34.85■■■■□ 3.17
KDM4B-205ENST00000588337 SLC10A5Q5PT55 438 aa34.85■■■■□ 3.17
KDM4B-205ENST00000588337 DDX60Q8IY21 1712 aaKnown RBP34.85■■■■□ 3.17
KDM4B-205ENST00000588337 ANKRD13DQ6ZTN6 518 aa34.84■■■■□ 3.17
KDM4B-205ENST00000588337 RBM17Q96I25 401 aaKnown RBP34.84■■■■□ 3.17
KDM4B-205ENST00000588337 NLRP3Q96P20 1036 aa34.84■■■■□ 3.17
KDM4B-205ENST00000588337 DPY19L2Q6NUT2 758 aa34.83■■■■□ 3.17
KDM4B-205ENST00000588337 C8orf58Q8NAV2 365 aa34.83■■■■□ 3.17
KDM4B-205ENST00000588337 CRAMP1Q96RY5 1269 aa34.83■■■■□ 3.17
KDM4B-205ENST00000588337 ZNF277Q9NRM2 450 aaPredicted RBP34.83■■■■□ 3.17
KDM4B-205ENST00000588337 VEGFAP15692 232 aaPredicted RBP34.81■■■■□ 3.16
KDM4B-205ENST00000588337 WWC1Q8IX03 1113 aa34.81■■■■□ 3.16
KDM4B-205ENST00000588337 TRMT112Q9UI30 125 aaKnown RBP34.81■■■■□ 3.16
KDM4B-205ENST00000588337 SYNE4Q8N205 404 aa34.8■■■■□ 3.16
KDM4B-205ENST00000588337 SH3TC1Q8TE82 1336 aa34.8■■■■□ 3.16
KDM4B-205ENST00000588337 HCLS1P14317 486 aaPredicted RBP34.79■■■■□ 3.16
KDM4B-205ENST00000588337 TSR2Q969E8 191 aaKnown RBP34.79■■■■□ 3.16
KDM4B-205ENST00000588337 ISCA1Q9BUE6 129 aa34.79■■■■□ 3.16
KDM4B-205ENST00000588337 POTECB2RU33 542 aa34.78■■■■□ 3.16
KDM4B-205ENST00000588337 PPEF1O14829 653 aaPredicted RBP34.78■■■■□ 3.16
KDM4B-205ENST00000588337 FSTL1Q12841 308 aa34.78■■■■□ 3.16
KDM4B-205ENST00000588337 CC2D2BQ6DHV5 1058 aa34.78■■■■□ 3.16
KDM4B-205ENST00000588337 SLC51AQ86UW1 340 aa34.78■■■■□ 3.16
KDM4B-205ENST00000588337 ZNF428Q96B54 188 aa34.77■■■■□ 3.16
KDM4B-205ENST00000588337 PSMD1Q99460 953 aa34.77■■■■□ 3.16
KDM4B-205ENST00000588337 PHAXQ9H814 394 aaKnown RBP34.77■■■■□ 3.16
KDM4B-205ENST00000588337 TAF1P21675 1872 aa34.77■■■■□ 3.16
KDM4B-205ENST00000588337 IARSP41252 1262 aaKnown RBP34.76■■■■□ 3.16
KDM4B-205ENST00000588337 TSPYL6Q8N831 410 aa34.76■■■■□ 3.16
KDM4B-205ENST00000588337 ABCC4O15439 1325 aa34.76■■■■□ 3.15
KDM4B-205ENST00000588337 ATP5J2-PTCD1G3V325 749 aa34.75■■■■□ 3.15
KDM4B-205ENST00000588337 NCBP3Q53F19 620 aaKnown RBP34.75■■■■□ 3.15
KDM4B-205ENST00000588337 DDNO94850 711 aaPredicted RBP34.74■■■■□ 3.15
KDM4B-205ENST00000588337 APLP1P51693 650 aa34.74■■■■□ 3.15
KDM4B-205ENST00000588337 GOLGA2Q08379 1002 aa34.74■■■■□ 3.15
KDM4B-205ENST00000588337 SCN4AP35499 1836 aa34.74■■■■□ 3.15
KDM4B-205ENST00000588337 TCERG1O14776 1098 aaKnown RBP34.73■■■■□ 3.15
KDM4B-205ENST00000588337 IL16Q14005 1332 aa34.73■■■■□ 3.15
KDM4B-205ENST00000588337 COL4A5P29400 1685 aa34.73■■■■□ 3.15
KDM4B-205ENST00000588337 CCDC30Q5VVM6 783 aa34.72■■■■□ 3.15
KDM4B-205ENST00000588337 RIC3Q7Z5B4 369 aa34.72■■■■□ 3.15
KDM4B-205ENST00000588337 SMC1BQ8NDV3 1235 aa34.72■■■■□ 3.15
KDM4B-205ENST00000588337 ZNF541Q9H0D2 1346 aa34.72■■■■□ 3.15
KDM4B-205ENST00000588337 GRIPAP1Q4V328 841 aa34.71■■■■□ 3.15
KDM4B-205ENST00000588337 FAM89AQ96GI7 184 aa34.7■■■■□ 3.15
KDM4B-205ENST00000588337 CHMP4AQ9BY43 222 aa34.7■■■■□ 3.15
KDM4B-205ENST00000588337 TRIM28Q13263 835 aaKnown RBP34.69■■■■□ 3.14
KDM4B-205ENST00000588337 ATP6V0A2Q9Y487 856 aa34.69■■■■□ 3.14
KDM4B-205ENST00000588337 LRRC37AA6NMS7 1700 aa34.68■■■■□ 3.14
KDM4B-205ENST00000588337 FZD9O00144 591 aa34.66■■■■□ 3.14
KDM4B-205ENST00000588337 DDX46Q7L014 1031 aaKnown RBP34.66■■■■□ 3.14
KDM4B-205ENST00000588337 L3MBTL3Q96JM7 780 aaPredicted RBP34.66■■■■□ 3.14
KDM4B-205ENST00000588337 MYD88Q99836 296 aa34.65■■■■□ 3.14
KDM4B-205ENST00000588337 SALL2Q9Y467 1007 aaPredicted RBP34.65■■■■□ 3.14
KDM4B-205ENST00000588337 BBOX1O75936 387 aa34.64■■■■□ 3.14
KDM4B-205ENST00000588337 GRAPQ13588 217 aa34.64■■■■□ 3.14
KDM4B-205ENST00000588337 TWISTNBQ3B726 338 aaPredicted RBP34.64■■■■□ 3.14
KDM4B-205ENST00000588337 RTL5Q5HYW3 569 aaPredicted RBP34.64■■■■□ 3.14
KDM4B-205ENST00000588337 GRAPLQ8TC17 118 aaPredicted RBP34.64■■■■□ 3.14
KDM4B-205ENST00000588337 TMX4Q9H1E5 349 aaPredicted RBP34.64■■■■□ 3.14
KDM4B-205ENST00000588337 FANCIQ9NVI1 1328 aa34.63■■■■□ 3.13
KDM4B-205ENST00000588337 JDP2Q8WYK2 163 aa34.63■■■■□ 3.13
KDM4B-205ENST00000588337 COL4A1P02462 1669 aa34.63■■■■□ 3.13
KDM4B-205ENST00000588337 DDX58O95786 925 aaKnown RBP34.62■■■■□ 3.13
KDM4B-205ENST00000588337 FAM9BQ8IZU0 186 aa34.62■■■■□ 3.13
KDM4B-205ENST00000588337 CACNA1FO60840 1977 aa34.62■■■■□ 3.13
KDM4B-205ENST00000588337 IQCA1LA6NCM1 817 aa34.61■■■■□ 3.13
KDM4B-205ENST00000588337 SF3B3Q15393 1217 aaKnown RBP34.61■■■■□ 3.13
KDM4B-205ENST00000588337 WDR63Q8IWG1 891 aa34.61■■■■□ 3.13
KDM4B-205ENST00000588337 SP8Q8IXZ3 490 aa34.61■■■■□ 3.13
KDM4B-205ENST00000588337 LARGE2Q8N3Y3 721 aa34.61■■■■□ 3.13
KDM4B-205ENST00000588337 STK31Q9BXU1 1019 aa34.61■■■■□ 3.13
KDM4B-205ENST00000588337 IRS4O14654 1257 aaPredicted RBP34.6■■■■□ 3.13
KDM4B-205ENST00000588337 ZBTB38Q8NAP3 1195 aaPredicted RBP34.6■■■■□ 3.13
KDM4B-205ENST00000588337 METTL22Q9BUU2 404 aaPredicted RBP34.6■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms