RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
AC003043.1-201ENST00000588260 NPR1P16066 1061 aa17.76■□□□□ 0.43
AC003043.1-201ENST00000588260 NLRP10Q86W26 655 aa17.76■□□□□ 0.43
AC003043.1-201ENST00000588260 SPINK5Q9NQ38 1064 aaPredicted RBP17.76■□□□□ 0.43
AC003043.1-201ENST00000588260 ABCC12Q96J65 1359 aa17.76■□□□□ 0.43
AC003043.1-201ENST00000588260 ZNF521Q96K83 1311 aa17.75■□□□□ 0.43
AC003043.1-201ENST00000588260 RIC1Q4ADV7 1423 aa17.75■□□□□ 0.43
AC003043.1-201ENST00000588260 TNRC6CQ9HCJ0 1690 aaKnown RBP17.75■□□□□ 0.43
AC003043.1-201ENST00000588260 KLRG2A4D1S0 409 aaPredicted RBP17.75■□□□□ 0.43
AC003043.1-201ENST00000588260 TCERG1O14776 1098 aaKnown RBP17.75■□□□□ 0.43
AC003043.1-201ENST00000588260 TRMT112Q9UI30 125 aaKnown RBP17.75■□□□□ 0.43
AC003043.1-201ENST00000588260 CACNA1FO60840 1977 aa17.74■□□□□ 0.43
AC003043.1-201ENST00000588260 E9PSI1 815 aa17.73■□□□□ 0.43
AC003043.1-201ENST00000588260 ATP5J2-PTCD1G3V325 749 aa17.73■□□□□ 0.43
AC003043.1-201ENST00000588260 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
AC003043.1-201ENST00000588260 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
AC003043.1-201ENST00000588260 RPGRQ92834 1020 aaKnown RBP17.73■□□□□ 0.43
AC003043.1-201ENST00000588260 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
AC003043.1-201ENST00000588260 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 VAMP4O75379 141 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 ALDH1B1P30837 517 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 SOGA3Q5TF21 947 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 ZNF784Q8NCA9 323 aaPredicted RBP17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 NLRP3Q96P20 1036 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 ISCA1Q9BUE6 129 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
AC003043.1-201ENST00000588260 C21orf2O43822 256 aa17.71■□□□□ 0.43
AC003043.1-201ENST00000588260 CRY2Q49AN0 593 aa17.71■□□□□ 0.43
AC003043.1-201ENST00000588260 MYD88Q99836 296 aa17.71■□□□□ 0.43
AC003043.1-201ENST00000588260 TRIM28Q13263 835 aaKnown RBP17.7■□□□□ 0.42
AC003043.1-201ENST00000588260 SLC10A5Q5PT55 438 aa17.7■□□□□ 0.42
AC003043.1-201ENST00000588260 KSR2Q6VAB6 950 aa17.7■□□□□ 0.42
AC003043.1-201ENST00000588260 RBM17Q96I25 401 aaKnown RBP17.7■□□□□ 0.42
AC003043.1-201ENST00000588260 MAP3K2Q9Y2U5 619 aa17.7■□□□□ 0.42
AC003043.1-201ENST00000588260 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
AC003043.1-201ENST00000588260 NEXNQ0ZGT2 675 aa17.69■□□□□ 0.42
AC003043.1-201ENST00000588260 C9orf131Q5VYM1 1079 aa17.69■□□□□ 0.42
AC003043.1-201ENST00000588260 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
AC003043.1-201ENST00000588260 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
AC003043.1-201ENST00000588260 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
AC003043.1-201ENST00000588260 ADCY9O60503 1353 aa17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 HCLS1P14317 486 aaPredicted RBP17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 HOXA10P31260 410 aaPredicted RBP17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 RASSF7Q02833 373 aa17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 FLIIQ13045 1269 aa17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 FKBP5Q13451 457 aaPredicted RBP17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 G2E3Q7L622 706 aa17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 RNF181Q9P0P0 153 aa17.68■□□□□ 0.42
AC003043.1-201ENST00000588260 SBF1O95248 1867 aa17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 LAMB2P55268 1798 aa17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 FAM89AQ96GI7 184 aa17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 CWC25Q9NXE8 425 aaPredicted RBP17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 FER1L6Q2WGJ9 1857 aa17.67■□□□□ 0.42
AC003043.1-201ENST00000588260 LMNB1P20700 586 aa17.66■□□□□ 0.42
AC003043.1-201ENST00000588260 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
AC003043.1-201ENST00000588260 RTL5Q5HYW3 569 aaPredicted RBP17.66■□□□□ 0.42
AC003043.1-201ENST00000588260 C3orf67Q6ZVT6 689 aa17.66■□□□□ 0.42
AC003043.1-201ENST00000588260 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
AC003043.1-201ENST00000588260 CRAMP1Q96RY5 1269 aa17.66■□□□□ 0.42
AC003043.1-201ENST00000588260 DDX60Q8IY21 1712 aaKnown RBP17.65■□□□□ 0.42
AC003043.1-201ENST00000588260 NFKBIEO00221 500 aa17.65■□□□□ 0.42
AC003043.1-201ENST00000588260 ZBTB38Q8NAP3 1195 aaPredicted RBP17.65■□□□□ 0.42
AC003043.1-201ENST00000588260 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
AC003043.1-201ENST00000588260 TAOK3Q9H2K8 898 aa17.65■□□□□ 0.42
AC003043.1-201ENST00000588260 CCDC88AQ3V6T2 1871 aa17.65■□□□□ 0.42
AC003043.1-201ENST00000588260 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 DDX46Q7L014 1031 aaKnown RBP17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 ZNF526Q8TF50 670 aaPredicted RBP17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 C7orf43Q8WVR3 580 aa17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 CDCA7LQ96GN5 454 aa17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 GPBP1L1Q9HC44 474 aaPredicted RBP17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 LTBP3Q9NS15 1303 aa17.64■□□□□ 0.41
AC003043.1-201ENST00000588260 PPEF1O14829 653 aaPredicted RBP17.63■□□□□ 0.41
AC003043.1-201ENST00000588260 PCCAP05165 728 aaPredicted RBP17.63■□□□□ 0.41
AC003043.1-201ENST00000588260 CC2D2BQ6DHV5 1058 aa17.63■□□□□ 0.41
AC003043.1-201ENST00000588260 DNAAF4Q8WXU2 420 aa17.63■□□□□ 0.41
AC003043.1-201ENST00000588260 ABCC4O15439 1325 aa17.62■□□□□ 0.41
AC003043.1-201ENST00000588260 TIAM2Q8IVF5 1701 aa17.61■□□□□ 0.41
AC003043.1-201ENST00000588260 IGKV5-2P06315 115 aa17.61■□□□□ 0.41
AC003043.1-201ENST00000588260 HNRNPUQ00839 825 aaKnown RBP eCLIP17.61■□□□□ 0.41
AC003043.1-201ENST00000588260 CWF19L2Q2TBE0 894 aaKnown RBP17.61■□□□□ 0.41
AC003043.1-201ENST00000588260 GRIPAP1Q4V328 841 aa17.61■□□□□ 0.41
AC003043.1-201ENST00000588260 ZC3H4Q9UPT8 1303 aaKnown RBP17.61■□□□□ 0.41
AC003043.1-201ENST00000588260 NEURL1BA8MQ27 555 aa17.6■□□□□ 0.41
AC003043.1-201ENST00000588260 BBOX1O75936 387 aa17.6■□□□□ 0.41
AC003043.1-201ENST00000588260 FKBP4Q02790 459 aaKnown RBP eCLIP17.6■□□□□ 0.41
AC003043.1-201ENST00000588260 OLFM4Q6UX06 510 aa17.6■□□□□ 0.41
AC003043.1-201ENST00000588260 LINS1Q8NG48 757 aa17.6■□□□□ 0.41
AC003043.1-201ENST00000588260 DICER1Q9UPY3 1922 aaKnown RBP17.6■□□□□ 0.41
AC003043.1-201ENST00000588260 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
AC003043.1-201ENST00000588260 GRAPQ13588 217 aa17.59■□□□□ 0.41
AC003043.1-201ENST00000588260 SF3B3Q15393 1217 aaKnown RBP17.59■□□□□ 0.41
AC003043.1-201ENST00000588260 TRMT2AQ8IZ69 625 aaKnown RBP17.59■□□□□ 0.41
AC003043.1-201ENST00000588260 GRAPLQ8TC17 118 aaPredicted RBP17.59■□□□□ 0.41
AC003043.1-201ENST00000588260 JARID2Q92833 1246 aaPredicted RBP17.59■□□□□ 0.41
AC003043.1-201ENST00000588260 KDM2BQ8NHM5 1336 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms