RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 EIF1AYO14602 144 aaKnown RBP8.54□□□□□ -1.04
TUBD1-208ENST00000588009 OPLAHO14841 1288 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 SMPD1P17405 629 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 RAD51AP2Q09MP3 1159 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 NBPF1Q3BBV0 1214 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 NT5DC4Q86YG4 428 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 FRMD6Q96NE9 622 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 INSM2Q96T92 566 aaPredicted RBP8.54□□□□□ -1.04
TUBD1-208ENST00000588009 TSEN34Q9BSV6 310 aaKnown RBP8.54□□□□□ -1.04
TUBD1-208ENST00000588009 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
TUBD1-208ENST00000588009 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
TUBD1-208ENST00000588009 A6NHS1 94 aa8.53□□□□□ -1.04
TUBD1-208ENST00000588009 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
TUBD1-208ENST00000588009 FANCCQ00597 558 aa8.53□□□□□ -1.04
TUBD1-208ENST00000588009 RNF34Q969K3 372 aa8.53□□□□□ -1.04
TUBD1-208ENST00000588009 SUSD3Q96L08 255 aa8.53□□□□□ -1.04
TUBD1-208ENST00000588009 GPC6Q9Y625 555 aaPredicted RBP8.53□□□□□ -1.04
TUBD1-208ENST00000588009 AK5Q9Y6K8 562 aa8.53□□□□□ -1.04
TUBD1-208ENST00000588009 SPINT1O43278 529 aa8.52□□□□□ -1.05
TUBD1-208ENST00000588009 PHKA2P46019 1235 aa8.52□□□□□ -1.05
TUBD1-208ENST00000588009 IER5Q5VY09 327 aa8.52□□□□□ -1.05
TUBD1-208ENST00000588009 ZNF280CQ8ND82 737 aa8.52□□□□□ -1.05
TUBD1-208ENST00000588009 KIFC2Q96AC6 838 aa8.52□□□□□ -1.05
TUBD1-208ENST00000588009 KLRG1Q96E93 195 aa8.52□□□□□ -1.05
TUBD1-208ENST00000588009 GMPR2Q9P2T1 348 aaKnown RBP8.52□□□□□ -1.05
TUBD1-208ENST00000588009 CPNE3O75131 537 aaKnown RBP8.51□□□□□ -1.05
TUBD1-208ENST00000588009 TATP17735 454 aaPredicted RBP8.51□□□□□ -1.05
TUBD1-208ENST00000588009 ZNF76P36508 570 aa8.51□□□□□ -1.05
TUBD1-208ENST00000588009 IDH3AP50213 366 aa8.51□□□□□ -1.05
TUBD1-208ENST00000588009 SF3A1Q15459 793 aaKnown RBP8.51□□□□□ -1.05
TUBD1-208ENST00000588009 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
TUBD1-208ENST00000588009 CTSOP43234 321 aaPredicted RBP8.5□□□□□ -1.05
TUBD1-208ENST00000588009 XKR5Q6UX68 686 aa8.5□□□□□ -1.05
TUBD1-208ENST00000588009 HPS1Q92902 700 aa8.5□□□□□ -1.05
TUBD1-208ENST00000588009 HSH2DQ96JZ2 352 aa8.5□□□□□ -1.05
TUBD1-208ENST00000588009 TGIF2Q9GZN2 237 aa8.5□□□□□ -1.05
TUBD1-208ENST00000588009 POLMQ9NP87 494 aaPredicted RBP8.5□□□□□ -1.05
TUBD1-208ENST00000588009 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
TUBD1-208ENST00000588009 SPG7Q9UQ90 795 aa8.5□□□□□ -1.05
TUBD1-208ENST00000588009 WFS1O76024 890 aa8.49□□□□□ -1.05
TUBD1-208ENST00000588009 CTSHP09668 335 aa8.49□□□□□ -1.05
TUBD1-208ENST00000588009 POU4F2Q12837 409 aa8.49□□□□□ -1.05
TUBD1-208ENST00000588009 BICDL1Q6ZP65 573 aa8.49□□□□□ -1.05
TUBD1-208ENST00000588009 CRELD1Q96HD1 420 aa8.49□□□□□ -1.05
TUBD1-208ENST00000588009 ATP13A2Q9NQ11 1180 aa8.49□□□□□ -1.05
TUBD1-208ENST00000588009 PPP1R1BQ9UD71 204 aaPredicted RBP8.49□□□□□ -1.05
TUBD1-208ENST00000588009 TNFRSF21O75509 655 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 INPP5BP32019 993 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 ARSDP51689 593 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.48□□□□□ -1.05
TUBD1-208ENST00000588009 NBPF10Q6P3W6 841 aaKnown RBP8.48□□□□□ -1.05
TUBD1-208ENST00000588009 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 UBXN4Q92575 508 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 ZIC5Q96T25 663 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 FNDC3AQ9Y2H6 1198 aaKnown RBP8.48□□□□□ -1.05
TUBD1-208ENST00000588009 USP20Q9Y2K6 914 aa8.48□□□□□ -1.05
TUBD1-208ENST00000588009 UPP2O95045 317 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 ATP4AP20648 1035 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 EIF4BP23588 611 aaKnown RBP8.47□□□□□ -1.05
TUBD1-208ENST00000588009 WDR44Q5JSH3 913 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 PRICKLE2Q7Z3G6 844 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 BTLAQ7Z6A9 289 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 CMTR1Q8N1G2 835 aaKnown RBP8.47□□□□□ -1.05
TUBD1-208ENST00000588009 CCDC74AQ96AQ1 378 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 NEUROD4Q9HD90 331 aa8.47□□□□□ -1.05
TUBD1-208ENST00000588009 FOXD3Q9UJU5 478 aaPredicted RBP8.47□□□□□ -1.05
TUBD1-208ENST00000588009 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
TUBD1-208ENST00000588009 GIPC1O14908 333 aa8.46□□□□□ -1.06
TUBD1-208ENST00000588009 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.06
TUBD1-208ENST00000588009 USPL1Q5W0Q7 1092 aa8.46□□□□□ -1.06
TUBD1-208ENST00000588009 PDE12Q6L8Q7 609 aaKnown RBP8.46□□□□□ -1.06
TUBD1-208ENST00000588009 TRIM47Q96LD4 638 aa8.46□□□□□ -1.06
TUBD1-208ENST00000588009 CCSER2Q9H7U1 834 aa8.46□□□□□ -1.06
TUBD1-208ENST00000588009 ZFYVE28Q9HCC9 887 aa8.46□□□□□ -1.06
TUBD1-208ENST00000588009 KCNMB2Q9Y691 235 aa8.46□□□□□ -1.06
TUBD1-208ENST00000588009 UBAP1LF5GYI3 381 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 TRIP4Q15650 581 aaPredicted RBP8.45□□□□□ -1.06
TUBD1-208ENST00000588009 ARSJQ5FYB0 599 aaPredicted RBP8.45□□□□□ -1.06
TUBD1-208ENST00000588009 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
TUBD1-208ENST00000588009 LRRC69Q6ZNQ3 347 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 ZNF438Q7Z4V0 828 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 SLC43A3Q8NBI5 491 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 RNF217Q8TC41 542 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 EPS8L3Q8TE67 593 aaKnown RBP8.45□□□□□ -1.06
TUBD1-208ENST00000588009 SNX29Q8TEQ0 813 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 TINF2Q9BSI4 451 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 OSBPL7Q9BZF2 842 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 ELP3Q9H9T3 547 aa8.45□□□□□ -1.06
TUBD1-208ENST00000588009 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.45□□□□□ -1.06
TUBD1-208ENST00000588009 BMP2P12643 396 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 MSX1P28360 303 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 LYSMD3Q7Z3D4 306 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 ACBD3Q9H3P7 528 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 C12orf49Q9H741 205 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 NLRP2Q9NX02 1062 aa8.44□□□□□ -1.06
TUBD1-208ENST00000588009 IRS1P35568 1242 aa8.43□□□□□ -1.06
TUBD1-208ENST00000588009 INSM1Q01101 510 aaPredicted RBP8.43□□□□□ -1.06
TUBD1-208ENST00000588009 CAPN10Q9HC96 672 aa8.43□□□□□ -1.06
TUBD1-208ENST00000588009 TIMMDC1Q9NPL8 285 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms