RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 NBPF5PQ86XG9 351 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-213ENST00000587988 UTP14AQ9BVJ6 771 aaKnown RBP13.58□□□□□ -0.24
SMARCA4-213ENST00000587988 CWC25Q9NXE8 425 aaPredicted RBP13.58□□□□□ -0.24
SMARCA4-213ENST00000587988 ABCC4O15439 1325 aa13.58□□□□□ -0.24
SMARCA4-213ENST00000587988 PXDNLA1KZ92 1463 aa13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 GCKRQ14397 625 aa13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 ERFEQ4G0M1 354 aa13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 RTL5Q5HYW3 569 aaPredicted RBP13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 TPTE2Q6XPS3 522 aa13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 PPP1R42Q7Z4L9 355 aa13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 SRCIN1Q9C0H9 1055 aa13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 TRMT112Q9UI30 125 aaKnown RBP13.57□□□□□ -0.24
SMARCA4-213ENST00000587988 ALDH1L1O75891 902 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 RRP1P56182 461 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 TMEM57Q8N5G2 664 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 CNBD1Q8NA66 436 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 PANK1Q8TE04 598 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 NYXQ9GZU5 481 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 ABCC12Q96J65 1359 aa13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 IBTKQ9P2D0 1353 aaPredicted RBP13.56□□□□□ -0.24
SMARCA4-213ENST00000587988 N4BP2Q86UW6 1770 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-213ENST00000587988 CCT4P50991 539 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-213ENST00000587988 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
SMARCA4-213ENST00000587988 SUPT16HQ9Y5B9 1047 aaKnown RBP13.55□□□□□ -0.24
SMARCA4-213ENST00000587988 H7C1W4 665 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 NPHP1O15259 732 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 CASP7P55210 303 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 FTSJ3Q8IY81 847 aaKnown RBP13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 RNF123Q5XPI4 1314 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 SH3TC1Q8TE82 1336 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 ANKRD31Q8N7Z5 1873 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 C10orf71Q711Q0 1435 aa13.54□□□□□ -0.24
SMARCA4-213ENST00000587988 LRP5O75197 1615 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 NBPF7P0C2Y1 421 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 HCLS1P14317 486 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 ST5P78524 1137 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 SLC10A5Q5PT55 438 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 C3orf67Q6ZVT6 689 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 PPP1R1BQ9UD71 204 aaPredicted RBP13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 DDX60Q8IY21 1712 aaKnown RBP13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 KIF13BQ9NQT8 1826 aa13.53□□□□□ -0.24
SMARCA4-213ENST00000587988 GRM8O00222 908 aa13.52□□□□□ -0.25
SMARCA4-213ENST00000587988 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-213ENST00000587988 FHDC1Q9C0D6 1143 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-213ENST00000587988 C9orf78Q9NZ63 289 aaPredicted RBP13.52□□□□□ -0.25
SMARCA4-213ENST00000587988 TNRC6CQ9HCJ0 1690 aaKnown RBP13.52□□□□□ -0.25
SMARCA4-213ENST00000587988 UTYO14607 1347 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 CDHR2Q9BYE9 1310 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 MS4A1P11836 297 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 MEIS3Q99687 375 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 BRIP1Q9BX63 1249 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 COG6Q9Y2V7 657 aa13.51□□□□□ -0.25
SMARCA4-213ENST00000587988 CHRNA5P30532 468 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 NLGN2Q8NFZ4 835 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 SUCLG2Q96I99 432 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 CD2APQ9Y5K6 639 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 LAMB2P55268 1798 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 KIAA1551Q9HCM1 1747 aa13.5□□□□□ -0.25
SMARCA4-213ENST00000587988 A0A0G2JLW4 131 aa13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 KLRG2A4D1S0 409 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 ZBTB7BO15156 539 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 PDE8AO60658 829 aa13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 CENPBP07199 599 aaPredicted RBP13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 PDE6BP35913 854 aa13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 NLRP3Q96P20 1036 aa13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 SYT17Q9BSW7 474 aa13.49□□□□□ -0.25
SMARCA4-213ENST00000587988 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 COL11A2P13942 1736 aaPredicted RBP13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 DPEP1P16444 411 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 KCNA3P22001 575 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 TGFB2P61812 414 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 FOXO4P98177 505 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 C2CD5Q86YS7 1000 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
SMARCA4-213ENST00000587988 UBTFL1P0CB47 393 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-213ENST00000587988 SF3B3Q15393 1217 aaKnown RBP13.47□□□□□ -0.25
SMARCA4-213ENST00000587988 CRY2Q49AN0 593 aa13.47□□□□□ -0.25
SMARCA4-213ENST00000587988 CCDC85AQ96PX6 553 aaPredicted RBP13.47□□□□□ -0.25
SMARCA4-213ENST00000587988 MYH3P11055 1940 aa13.47□□□□□ -0.25
SMARCA4-213ENST00000587988 H0YIN7 160 aa13.46□□□□□ -0.25
SMARCA4-213ENST00000587988 GNAI3P08754 354 aa13.46□□□□□ -0.25
SMARCA4-213ENST00000587988 SRGNP10124 158 aa13.46□□□□□ -0.25
SMARCA4-213ENST00000587988 CTSWP56202 376 aa13.46□□□□□ -0.25
SMARCA4-213ENST00000587988 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
SMARCA4-213ENST00000587988 CRBNQ96SW2 442 aa13.46□□□□□ -0.25
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