RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 BTLAQ7Z6A9 289 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 SYT9Q86SS6 491 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 SLC30A3Q99726 388 aa8.73□□□□□ -1.01
VMP1-205ENST00000587470 K7ELQ4 463 aaPredicted RBP8.72□□□□□ -1.01
VMP1-205ENST00000587470 GNB5O14775 395 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 ALAS2P22557 587 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 SPEM2Q0P670 501 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 NEUROD1Q13562 356 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 ELOAQ14241 798 aaKnown RBP8.72□□□□□ -1.01
VMP1-205ENST00000587470 GRIN2CQ14957 1233 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 IER5Q5VY09 327 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 VTI1AQ96AJ9 217 aa8.72□□□□□ -1.01
VMP1-205ENST00000587470 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
VMP1-205ENST00000587470 ELOA3DA6NLF2 546 aaPredicted RBP8.71□□□□□ -1.02
VMP1-205ENST00000587470 C1QTNF9BB2RNN3 333 aa8.71□□□□□ -1.02
VMP1-205ENST00000587470 ITGB7P26010 798 aa8.71□□□□□ -1.02
VMP1-205ENST00000587470 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.02
VMP1-205ENST00000587470 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
VMP1-205ENST00000587470 ELOA3BQ3SY89 546 aa8.71□□□□□ -1.02
VMP1-205ENST00000587470 CD163Q86VB7 1156 aa8.71□□□□□ -1.02
VMP1-205ENST00000587470 ELOA3Q8NG57 546 aa8.71□□□□□ -1.02
VMP1-205ENST00000587470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.02
VMP1-205ENST00000587470 TGFBR3LH3BV60 316 aa8.7□□□□□ -1.02
VMP1-205ENST00000587470 CHRNA4P43681 627 aa8.7□□□□□ -1.02
VMP1-205ENST00000587470 ACIN1Q9UKV3 1341 aaKnown RBP8.7□□□□□ -1.02
VMP1-205ENST00000587470 ADARB2-AS1A8MUL3 147 aa8.69□□□□□ -1.02
VMP1-205ENST00000587470 FURINP09958 794 aa8.69□□□□□ -1.02
VMP1-205ENST00000587470 TNFRSF25Q93038 417 aa8.69□□□□□ -1.02
VMP1-205ENST00000587470 TRIM11Q96F44 468 aa8.69□□□□□ -1.02
VMP1-205ENST00000587470 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
VMP1-205ENST00000587470 SERPINA10Q9UK55 444 aa8.69□□□□□ -1.02
VMP1-205ENST00000587470 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.68□□□□□ -1.02
VMP1-205ENST00000587470 ATG7O95352 703 aa8.68□□□□□ -1.02
VMP1-205ENST00000587470 EFCC1Q9HA90 598 aa8.68□□□□□ -1.02
VMP1-205ENST00000587470 DMGDHQ9UI17 866 aaKnown RBP8.68□□□□□ -1.02
VMP1-205ENST00000587470 ZMIZ1Q9ULJ6 1067 aa8.68□□□□□ -1.02
VMP1-205ENST00000587470 BCS1LQ9Y276 419 aa8.68□□□□□ -1.02
VMP1-205ENST00000587470 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
VMP1-205ENST00000587470 MYO19Q96H55 970 aa8.67□□□□□ -1.02
VMP1-205ENST00000587470 QTRT2Q9H974 415 aaKnown RBP8.67□□□□□ -1.02
VMP1-205ENST00000587470 NISCHQ9Y2I1 1504 aa8.67□□□□□ -1.02
VMP1-205ENST00000587470 FAM69CQ0P6D2 419 aa8.66□□□□□ -1.02
VMP1-205ENST00000587470 DGKZQ13574 1117 aa8.66□□□□□ -1.02
VMP1-205ENST00000587470 C11orf91Q3C1V1 193 aa8.66□□□□□ -1.02
VMP1-205ENST00000587470 NOP53Q9NZM5 478 aaKnown RBP8.66□□□□□ -1.02
VMP1-205ENST00000587470 KLK14Q9P0G3 267 aa8.66□□□□□ -1.02
VMP1-205ENST00000587470 EPB42P16452 691 aa8.65□□□□□ -1.02
VMP1-205ENST00000587470 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
VMP1-205ENST00000587470 BHMTQ93088 406 aa8.65□□□□□ -1.02
VMP1-205ENST00000587470 PRIMPOLQ96LW4 560 aa8.65□□□□□ -1.02
VMP1-205ENST00000587470 PRMT3O60678 531 aa8.64□□□□□ -1.03
VMP1-205ENST00000587470 STK32AQ8WU08 396 aa8.64□□□□□ -1.03
VMP1-205ENST00000587470 PBXIP1Q96AQ6 731 aa8.64□□□□□ -1.03
VMP1-205ENST00000587470 GSX2Q9BZM3 304 aa8.64□□□□□ -1.03
VMP1-205ENST00000587470 ARID3CA6NKF2 412 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 INPP5BP32019 993 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 ADH7P40394 386 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 IDH3AP50213 366 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 FKBP5Q13451 457 aaPredicted RBP8.63□□□□□ -1.03
VMP1-205ENST00000587470 CCINQ13939 588 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 OCLNQ16625 522 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
VMP1-205ENST00000587470 MICAL2O94851 1124 aa8.62□□□□□ -1.03
VMP1-205ENST00000587470 PNMA5Q96PV4 448 aa8.62□□□□□ -1.03
VMP1-205ENST00000587470 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
VMP1-205ENST00000587470 STARD13Q9Y3M8 1113 aa8.62□□□□□ -1.03
VMP1-205ENST00000587470 ARSDP51689 593 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 COX20Q5RI15 118 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 TMEM164Q5U3C3 297 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 Q8N3U1 123 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 COL26A1Q96A83 441 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 IFT43Q96FT9 208 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
VMP1-205ENST00000587470 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.61□□□□□ -1.03
VMP1-205ENST00000587470 M0R082 166 aa8.6□□□□□ -1.03
VMP1-205ENST00000587470 MICALL1Q8N3F8 863 aa8.6□□□□□ -1.03
VMP1-205ENST00000587470 ZNF417Q8TAU3 575 aa8.6□□□□□ -1.03
VMP1-205ENST00000587470 ZNF587Q96SQ5 575 aaPredicted RBP8.6□□□□□ -1.03
VMP1-205ENST00000587470 UBE2OQ9C0C9 1292 aaKnown RBP8.6□□□□□ -1.03
VMP1-205ENST00000587470 IGFLR1Q9H665 355 aa8.6□□□□□ -1.03
VMP1-205ENST00000587470 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
VMP1-205ENST00000587470 GRNP28799 593 aaKnown RBP8.59□□□□□ -1.03
VMP1-205ENST00000587470 CXXC1Q9P0U4 656 aaPredicted RBP8.59□□□□□ -1.03
VMP1-205ENST00000587470 SPDYE3A6NKU9 549 aa8.58□□□□□ -1.04
VMP1-205ENST00000587470 OPLAHO14841 1288 aa8.58□□□□□ -1.04
VMP1-205ENST00000587470 ALBP02768 609 aa8.58□□□□□ -1.04
VMP1-205ENST00000587470 NFKB1P19838 968 aa8.58□□□□□ -1.04
VMP1-205ENST00000587470 TBC1D8BQ0IIM8 1120 aa8.58□□□□□ -1.04
VMP1-205ENST00000587470 C20orf204Q6ZNR8 217 aa8.58□□□□□ -1.04
VMP1-205ENST00000587470 CLP1Q92989 425 aaKnown RBP8.58□□□□□ -1.04
VMP1-205ENST00000587470 MAP3K6O95382 1288 aa8.57□□□□□ -1.04
VMP1-205ENST00000587470 PCSK7Q16549 785 aa8.57□□□□□ -1.04
VMP1-205ENST00000587470 C16orf46Q6P387 395 aa8.57□□□□□ -1.04
VMP1-205ENST00000587470 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
VMP1-205ENST00000587470 KRTAP4-8Q9BYQ9 185 aa8.57□□□□□ -1.04
VMP1-205ENST00000587470 DNAJB12Q9NXW2 375 aaKnown RBP8.57□□□□□ -1.04
VMP1-205ENST00000587470 SLC6A14Q9UN76 642 aa8.57□□□□□ -1.04
VMP1-205ENST00000587470 PTCD1O75127 700 aaKnown RBP8.56□□□□□ -1.04
VMP1-205ENST00000587470 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
VMP1-205ENST00000587470 BRD2P25440 801 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms