RNA–Protein interactions for RNA: ENST00000587387.5

GRN-208, Transcript of granulin precursor, humanhuman

TSL 4

Gene GRN, Length 614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-208ENST00000587387 NLRP10Q86W26 655 aa19.38■□□□□ 0.69
GRN-208ENST00000587387 RNF181Q9P0P0 153 aa19.38■□□□□ 0.69
GRN-208ENST00000587387 DDX60Q8IY21 1712 aaKnown RBP19.37■□□□□ 0.69
GRN-208ENST00000587387 HCLS1P14317 486 aaPredicted RBP19.37■□□□□ 0.69
GRN-208ENST00000587387 PLBD2Q8NHP8 589 aa19.37■□□□□ 0.69
GRN-208ENST00000587387 JARID2Q92833 1246 aaPredicted RBP19.37■□□□□ 0.69
GRN-208ENST00000587387 HYPKQ9NX55 129 aa19.37■□□□□ 0.69
GRN-208ENST00000587387 EXOSC9Q06265 439 aaKnown RBP19.36■□□□□ 0.69
GRN-208ENST00000587387 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
GRN-208ENST00000587387 C7orf43Q8WVR3 580 aa19.36■□□□□ 0.69
GRN-208ENST00000587387 UTP14AQ9BVJ6 771 aaKnown RBP19.36■□□□□ 0.69
GRN-208ENST00000587387 NYXQ9GZU5 481 aa19.36■□□□□ 0.69
GRN-208ENST00000587387 TIAM2Q8IVF5 1701 aa19.35■□□□□ 0.69
GRN-208ENST00000587387 NPR1P16066 1061 aa19.35■□□□□ 0.69
GRN-208ENST00000587387 CNKSR1Q969H4 720 aa19.35■□□□□ 0.69
GRN-208ENST00000587387 COL4A1P02462 1669 aa19.35■□□□□ 0.69
GRN-208ENST00000587387 IL16Q14005 1332 aa19.34■□□□□ 0.69
GRN-208ENST00000587387 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
GRN-208ENST00000587387 PPP1R42Q7Z4L9 355 aa19.34■□□□□ 0.69
GRN-208ENST00000587387 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
GRN-208ENST00000587387 ISCA1Q9BUE6 129 aa19.34■□□□□ 0.69
GRN-208ENST00000587387 CRY2Q49AN0 593 aa19.33■□□□□ 0.68
GRN-208ENST00000587387 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
GRN-208ENST00000587387 CCDC30Q5VVM6 783 aa19.33■□□□□ 0.68
GRN-208ENST00000587387 RIC3Q7Z5B4 369 aa19.33■□□□□ 0.68
GRN-208ENST00000587387 MIER1Q8N108 512 aa19.33■□□□□ 0.68
GRN-208ENST00000587387 FAM89AQ96GI7 184 aa19.33■□□□□ 0.68
GRN-208ENST00000587387 GPBP1L1Q9HC44 474 aaPredicted RBP19.33■□□□□ 0.68
GRN-208ENST00000587387 TRMT112Q9UI30 125 aaKnown RBP19.33■□□□□ 0.68
GRN-208ENST00000587387 VAMP4O75379 141 aa19.32■□□□□ 0.68
GRN-208ENST00000587387 MYD88Q99836 296 aa19.32■□□□□ 0.68
GRN-208ENST00000587387 NMRK2Q9NPI5 230 aa19.32■□□□□ 0.68
GRN-208ENST00000587387 IBTKQ9P2D0 1353 aaPredicted RBP19.32■□□□□ 0.68
GRN-208ENST00000587387 ZNF521Q96K83 1311 aa19.31■□□□□ 0.68
GRN-208ENST00000587387 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
GRN-208ENST00000587387 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
GRN-208ENST00000587387 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
GRN-208ENST00000587387 HSP90AB3PQ58FF7 597 aa19.3■□□□□ 0.68
GRN-208ENST00000587387 SLC10A5Q5PT55 438 aa19.3■□□□□ 0.68
GRN-208ENST00000587387 RPGRQ92834 1020 aaKnown RBP19.3■□□□□ 0.68
GRN-208ENST00000587387 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
GRN-208ENST00000587387 LMNB1P20700 586 aa19.29■□□□□ 0.68
GRN-208ENST00000587387 GOLGA2Q08379 1002 aa19.29■□□□□ 0.68
GRN-208ENST00000587387 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
GRN-208ENST00000587387 RIC1Q4ADV7 1423 aa19.28■□□□□ 0.68
GRN-208ENST00000587387 PI4KAP2A4QPH2 592 aa19.28■□□□□ 0.68
GRN-208ENST00000587387 KIF3CO14782 793 aa19.28■□□□□ 0.68
GRN-208ENST00000587387 PI4KAP1Q8N8J0 262 aa19.28■□□□□ 0.68
GRN-208ENST00000587387 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
GRN-208ENST00000587387 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
GRN-208ENST00000587387 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
GRN-208ENST00000587387 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
GRN-208ENST00000587387 HOXA10P31260 410 aaPredicted RBP19.27■□□□□ 0.68
GRN-208ENST00000587387 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
GRN-208ENST00000587387 TAOK3Q9H2K8 898 aa19.27■□□□□ 0.68
GRN-208ENST00000587387 ABCC4O15439 1325 aa19.26■□□□□ 0.67
GRN-208ENST00000587387 SNED1Q8TER0 1413 aa19.26■□□□□ 0.67
GRN-208ENST00000587387 IGKV5-2P06315 115 aa19.26■□□□□ 0.67
GRN-208ENST00000587387 ALDH1B1P30837 517 aa19.26■□□□□ 0.67
GRN-208ENST00000587387 C1QTNF8P60827 252 aa19.26■□□□□ 0.67
GRN-208ENST00000587387 METTL22Q9BUU2 404 aaPredicted RBP19.26■□□□□ 0.67
GRN-208ENST00000587387 STK31Q9BXU1 1019 aa19.26■□□□□ 0.67
GRN-208ENST00000587387 COL4A5P29400 1685 aa19.25■□□□□ 0.67
GRN-208ENST00000587387 CCER2I3L3R5 266 aa19.25■□□□□ 0.67
GRN-208ENST00000587387 CWF19L2Q2TBE0 894 aaKnown RBP19.25■□□□□ 0.67
GRN-208ENST00000587387 CCDC93Q567U6 631 aa19.25■□□□□ 0.67
GRN-208ENST00000587387 KSR2Q6VAB6 950 aa19.25■□□□□ 0.67
GRN-208ENST00000587387 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
GRN-208ENST00000587387 RRAGCQ9HB90 399 aa19.25■□□□□ 0.67
GRN-208ENST00000587387 CCDC85AQ96PX6 553 aaPredicted RBP19.24■□□□□ 0.67
GRN-208ENST00000587387 CRAMP1Q96RY5 1269 aa19.24■□□□□ 0.67
GRN-208ENST00000587387 F6X3S4 739 aa19.23■□□□□ 0.67
GRN-208ENST00000587387 PPEF1O14829 653 aaPredicted RBP19.23■□□□□ 0.67
GRN-208ENST00000587387 FLIIQ13045 1269 aa19.23■□□□□ 0.67
GRN-208ENST00000587387 TRIM28Q13263 835 aaKnown RBP19.23■□□□□ 0.67
GRN-208ENST00000587387 IRS4O14654 1257 aaPredicted RBP19.22■□□□□ 0.67
GRN-208ENST00000587387 FKBP4Q02790 459 aaKnown RBP eCLIP19.22■□□□□ 0.67
GRN-208ENST00000587387 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
GRN-208ENST00000587387 LTBP3Q9NS15 1303 aa19.22■□□□□ 0.67
GRN-208ENST00000587387 SPEF2Q9C093 1822 aa19.21■□□□□ 0.67
GRN-208ENST00000587387 DDX58O95786 925 aaKnown RBP19.21■□□□□ 0.67
GRN-208ENST00000587387 CELF1Q92879 486 aaKnown RBP19.21■□□□□ 0.67
GRN-208ENST00000587387 DDNO94850 711 aaPredicted RBP19.2■□□□□ 0.66
GRN-208ENST00000587387 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
GRN-208ENST00000587387 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
GRN-208ENST00000587387 ZBTB38Q8NAP3 1195 aaPredicted RBP19.2■□□□□ 0.66
GRN-208ENST00000587387 SEC31BQ9NQW1 1179 aa19.2■□□□□ 0.66
GRN-208ENST00000587387 CWC25Q9NXE8 425 aaPredicted RBP19.2■□□□□ 0.66
GRN-208ENST00000587387 RNF123Q5XPI4 1314 aa19.2■□□□□ 0.66
GRN-208ENST00000587387 MYH3P11055 1940 aa19.19■□□□□ 0.66
GRN-208ENST00000587387 GLTPD2A6NH11 291 aa19.19■□□□□ 0.66
GRN-208ENST00000587387 POTECB2RU33 542 aa19.19■□□□□ 0.66
GRN-208ENST00000587387 CCDC191Q8NCU4 936 aa19.19■□□□□ 0.66
GRN-208ENST00000587387 ZNF541Q9H0D2 1346 aa19.19■□□□□ 0.66
GRN-208ENST00000587387 NEURL1BA8MQ27 555 aa19.18■□□□□ 0.66
GRN-208ENST00000587387 SOGA3Q5TF21 947 aa19.18■□□□□ 0.66
GRN-208ENST00000587387 DDX46Q7L014 1031 aaKnown RBP19.18■□□□□ 0.66
GRN-208ENST00000587387 RTKN2Q8IZC4 609 aa19.18■□□□□ 0.66
GRN-208ENST00000587387 ATP6V0A2Q9Y487 856 aa19.18■□□□□ 0.66
GRN-208ENST00000587387 PCCAP05165 728 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms