RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, human

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-210	ENST00000587235	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.99	■■■□□ 2.87
TCF3-210	ENST00000587235	AIMP1	Q12904	312 aa	Known RBP	32.98	■■■□□ 2.87
TCF3-210	ENST00000587235	RPGR	Q92834	1020 aa	Known RBP	32.98	■■■□□ 2.87
TCF3-210	ENST00000587235	WDR90	Q96KV7	1748 aa		32.97	■■■□□ 2.87
TCF3-210	ENST00000587235	HOXA10	P31260	410 aa	Predicted RBP	32.96	■■■□□ 2.87
TCF3-210	ENST00000587235	XAGE3	Q8WTP9	111 aa		32.96	■■■□□ 2.87
TCF3-210	ENST00000587235	SYNE4	Q8N205	404 aa		32.95	■■■□□ 2.87
TCF3-210	ENST00000587235	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.95	■■■□□ 2.87
TCF3-210	ENST00000587235	RIC1	Q4ADV7	1423 aa		32.94	■■■□□ 2.86
TCF3-210	ENST00000587235	UTP14A	Q9BVJ6	771 aa	Known RBP	32.94	■■■□□ 2.86
TCF3-210	ENST00000587235	ANP32C	O43423	234 aa		32.93	■■■□□ 2.86
TCF3-210	ENST00000587235	RBM17	Q96I25	401 aa	Known RBP	32.93	■■■□□ 2.86
TCF3-210	ENST00000587235	C3orf67	Q6ZVT6	689 aa		32.92	■■■□□ 2.86
TCF3-210	ENST00000587235	CFAP44	Q96MT7	982 aa		32.92	■■■□□ 2.86
TCF3-210	ENST00000587235	HSP90AB3P	Q58FF7	597 aa		32.91	■■■□□ 2.86
TCF3-210	ENST00000587235	SLC10A5	Q5PT55	438 aa		32.91	■■■□□ 2.86
TCF3-210	ENST00000587235	CC2D2B	Q6DHV5	1058 aa		32.91	■■■□□ 2.86
TCF3-210	ENST00000587235	NLRP3	Q96P20	1036 aa		32.91	■■■□□ 2.86
TCF3-210	ENST00000587235	CRAMP1	Q96RY5	1269 aa		32.91	■■■□□ 2.86
TCF3-210	ENST00000587235	IARS	P41252	1262 aa	Known RBP	32.9	■■■□□ 2.86
TCF3-210	ENST00000587235	CHPF2	Q9P2E5	772 aa		32.9	■■■□□ 2.86
TCF3-210	ENST00000587235	APAF1	O14727	1248 aa		32.89	■■■□□ 2.86
TCF3-210	ENST00000587235	HDGFL1	Q5TGJ6	251 aa		32.89	■■■□□ 2.86
TCF3-210	ENST00000587235	PSMD1	Q99460	953 aa		32.89	■■■□□ 2.86
TCF3-210	ENST00000587235	TCIRG1	Q13488	830 aa		32.88	■■■□□ 2.85
TCF3-210	ENST00000587235	NLRP10	Q86W26	655 aa		32.88	■■■□□ 2.85
TCF3-210	ENST00000587235	HOXB7	P09629	217 aa		32.87	■■■□□ 2.85
TCF3-210	ENST00000587235	CCDC184	Q52MB2	194 aa		32.87	■■■□□ 2.85
TCF3-210	ENST00000587235	KLRG1	Q96E93	195 aa		32.87	■■■□□ 2.85
TCF3-210	ENST00000587235	TCERG1	O14776	1098 aa	Known RBP	32.86	■■■□□ 2.85
TCF3-210	ENST00000587235	L3MBTL3	Q96JM7	780 aa	Predicted RBP	32.86	■■■□□ 2.85
TCF3-210	ENST00000587235	MBIP	Q9NS73	344 aa		32.86	■■■□□ 2.85
TCF3-210	ENST00000587235	SNED1	Q8TER0	1413 aa		32.85	■■■□□ 2.85
TCF3-210	ENST00000587235	ZNF541	Q9H0D2	1346 aa		32.85	■■■□□ 2.85
TCF3-210	ENST00000587235	PPEF1	O14829	653 aa	Predicted RBP	32.85	■■■□□ 2.85
TCF3-210	ENST00000587235	DUSP27	Q5VZP5	1158 aa		32.85	■■■□□ 2.85
TCF3-210	ENST00000587235	RNF123	Q5XPI4	1314 aa		32.84	■■■□□ 2.85
TCF3-210	ENST00000587235	IQCA1L	A6NCM1	817 aa		32.84	■■■□□ 2.85
TCF3-210	ENST00000587235	GRIPAP1	Q4V328	841 aa		32.84	■■■□□ 2.85
TCF3-210	ENST00000587235	DBF4	Q9UBU7	674 aa	Predicted RBP	32.84	■■■□□ 2.85
TCF3-210	ENST00000587235	FZD9	O00144	591 aa		32.83	■■■□□ 2.85
TCF3-210	ENST00000587235	ZNF853	P0CG23	659 aa		32.83	■■■□□ 2.85
TCF3-210	ENST00000587235	POTEI	P0CG38	1075 aa		32.83	■■■□□ 2.85
TCF3-210	ENST00000587235	POTEJ	P0CG39	1038 aa		32.83	■■■□□ 2.85
TCF3-210	ENST00000587235	CHADL	Q6NUI6	762 aa		32.83	■■■□□ 2.85
TCF3-210	ENST00000587235	TRMT112	Q9UI30	125 aa	Known RBP	32.83	■■■□□ 2.85
TCF3-210	ENST00000587235	HCLS1	P14317	486 aa	Predicted RBP	32.82	■■■□□ 2.84
TCF3-210	ENST00000587235	CALD1	Q05682	793 aa	Known RBP	32.82	■■■□□ 2.84
TCF3-210	ENST00000587235	ANKRD13D	Q6ZTN6	518 aa		32.82	■■■□□ 2.84
TCF3-210	ENST00000587235	SLC51A	Q86UW1	340 aa		32.82	■■■□□ 2.84
TCF3-210	ENST00000587235	PLBD2	Q8NHP8	589 aa		32.82	■■■□□ 2.84
TCF3-210	ENST00000587235	JDP2	Q8WYK2	163 aa		32.82	■■■□□ 2.84
TCF3-210	ENST00000587235	TAF1D	Q9H5J8	278 aa	Predicted RBP	32.81	■■■□□ 2.84
TCF3-210	ENST00000587235	IFT57	Q9NWB7	429 aa		32.8	■■■□□ 2.84
TCF3-210	ENST00000587235	GNAI1	P63096	354 aa		32.79	■■■□□ 2.84
TCF3-210	ENST00000587235	TMX4	Q9H1E5	349 aa	Predicted RBP	32.79	■■■□□ 2.84
TCF3-210	ENST00000587235	HYPK	Q9NX55	129 aa		32.79	■■■□□ 2.84
TCF3-210	ENST00000587235	SH3TC1	Q8TE82	1336 aa		32.78	■■■□□ 2.84
TCF3-210	ENST00000587235	ZNF428	Q96B54	188 aa		32.78	■■■□□ 2.84
TCF3-210	ENST00000587235	ATP6V0A2	Q9Y487	856 aa		32.78	■■■□□ 2.84
TCF3-210	ENST00000587235	ANKRD36C	Q5JPF3	1778 aa		32.78	■■■□□ 2.84
TCF3-210	ENST00000587235	ABCC4	O15439	1325 aa		32.77	■■■□□ 2.84
TCF3-210	ENST00000587235	JMY	Q8N9B5	988 aa		32.77	■■■□□ 2.84
TCF3-210	ENST00000587235	MRS2	Q9HD23	443 aa		32.77	■■■□□ 2.84
TCF3-210	ENST00000587235	HACL1	Q9UJ83	578 aa		32.77	■■■□□ 2.84
TCF3-210	ENST00000587235	LARGE2	Q8N3Y3	721 aa		32.76	■■■□□ 2.83
TCF3-210	ENST00000587235	SCN4A	P35499	1836 aa		32.76	■■■□□ 2.83
TCF3-210	ENST00000587235	ELL2	O00472	640 aa	Predicted RBP	32.75	■■■□□ 2.83
TCF3-210	ENST00000587235	BBOX1	O75936	387 aa		32.75	■■■□□ 2.83
TCF3-210	ENST00000587235	EIF6	P56537	245 aa	Known RBP	32.75	■■■□□ 2.83
TCF3-210	ENST00000587235	LDHD	Q86WU2	507 aa		32.75	■■■□□ 2.83
TCF3-210	ENST00000587235	GPC2	Q8N158	579 aa		32.75	■■■□□ 2.83
TCF3-210	ENST00000587235	ISCA1	Q9BUE6	129 aa		32.75	■■■□□ 2.83
TCF3-210	ENST00000587235	ATP5J2-PTCD1	G3V325	749 aa		32.74	■■■□□ 2.83
TCF3-210	ENST00000587235	EAPP	Q56P03	285 aa	Predicted RBP	32.73	■■■□□ 2.83
TCF3-210	ENST00000587235	DDX46	Q7L014	1031 aa	Known RBP	32.73	■■■□□ 2.83
TCF3-210	ENST00000587235	EPHX2	P34913	555 aa		32.72	■■■□□ 2.83
TCF3-210	ENST00000587235	NCBP3	Q53F19	620 aa	Known RBP	32.72	■■■□□ 2.83
TCF3-210	ENST00000587235	SP8	Q8IXZ3	490 aa		32.72	■■■□□ 2.83
TCF3-210	ENST00000587235	GJA3	Q9Y6H8	435 aa		32.72	■■■□□ 2.83
TCF3-210	ENST00000587235	COL4A5	P29400	1685 aa		32.72	■■■□□ 2.83
TCF3-210	ENST00000587235	PPIP5K2	O43314	1243 aa		32.7	■■■□□ 2.83
TCF3-210	ENST00000587235	FAM89A	Q96GI7	184 aa		32.7	■■■□□ 2.83
TCF3-210	ENST00000587235	CLEC11A	Q9Y240	323 aa		32.7	■■■□□ 2.83
TCF3-210	ENST00000587235	GRAP	Q13588	217 aa		32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	CCDC27	Q2M243	656 aa		32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	IFFO2	Q5TF58	517 aa		32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	NIM1K	Q8IY84	436 aa		32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	C8orf58	Q8NAV2	365 aa		32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	GRAPL	Q8TC17	118 aa	Predicted RBP	32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	PHAX	Q9H814	394 aa	Known RBP	32.69	■■■□□ 2.82
TCF3-210	ENST00000587235	TRIM28	Q13263	835 aa	Known RBP	32.68	■■■□□ 2.82
TCF3-210	ENST00000587235	AOC3	Q16853	763 aa		32.68	■■■□□ 2.82
TCF3-210	ENST00000587235	RIC3	Q7Z5B4	369 aa		32.68	■■■□□ 2.82
TCF3-210	ENST00000587235	PNMA8A	Q86V59	439 aa	Predicted RBP	32.68	■■■□□ 2.82
TCF3-210	ENST00000587235	VPS33B	Q9H267	617 aa		32.68	■■■□□ 2.82
TCF3-210	ENST00000587235	LAMB2	P55268	1798 aa		32.68	■■■□□ 2.82
TCF3-210	ENST00000587235	MPND	Q8N594	471 aa		32.67	■■■□□ 2.82
TCF3-210	ENST00000587235	SUPT20H	Q8NEM7	779 aa		32.67	■■■□□ 2.82
TCF3-210	ENST00000587235	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.67	■■■□□ 2.82

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms