RNA–Protein interactions for RNA: ENST00000587215.1

PKN1-209, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 363 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-209ENST00000587215 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
PKN1-209ENST00000587215 XAGE3Q8WTP9 111 aa21.66■■□□□ 1.06
PKN1-209ENST00000587215 DDX21Q9NR30 783 aaKnown RBP eCLIP21.66■■□□□ 1.06
PKN1-209ENST00000587215 ZNF277Q9NRM2 450 aaPredicted RBP21.66■■□□□ 1.06
PKN1-209ENST00000587215 SLC10A5Q5PT55 438 aa21.65■■□□□ 1.06
PKN1-209ENST00000587215 CFAP44Q96MT7 982 aa21.65■■□□□ 1.06
PKN1-209ENST00000587215 RIC1Q4ADV7 1423 aa21.64■■□□□ 1.06
PKN1-209ENST00000587215 WDR90Q96KV7 1748 aa21.64■■□□□ 1.06
PKN1-209ENST00000587215 APAF1O14727 1248 aa21.64■■□□□ 1.05
PKN1-209ENST00000587215 SYNE4Q8N205 404 aa21.64■■□□□ 1.05
PKN1-209ENST00000587215 RPGRQ92834 1020 aaKnown RBP21.64■■□□□ 1.05
PKN1-209ENST00000587215 CRAMP1Q96RY5 1269 aa21.63■■□□□ 1.05
PKN1-209ENST00000587215 UTP14AQ9BVJ6 771 aaKnown RBP21.63■■□□□ 1.05
PKN1-209ENST00000587215 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
PKN1-209ENST00000587215 TCIRG1Q13488 830 aa21.62■■□□□ 1.05
PKN1-209ENST00000587215 RBM17Q96I25 401 aaKnown RBP21.62■■□□□ 1.05
PKN1-209ENST00000587215 NLRP3Q96P20 1036 aa21.62■■□□□ 1.05
PKN1-209ENST00000587215 CHPF2Q9P2E5 772 aa21.62■■□□□ 1.05
PKN1-209ENST00000587215 SNED1Q8TER0 1413 aa21.62■■□□□ 1.05
PKN1-209ENST00000587215 HOXB7P09629 217 aa21.61■■□□□ 1.05
PKN1-209ENST00000587215 HSP90AB3PQ58FF7 597 aa21.61■■□□□ 1.05
PKN1-209ENST00000587215 CC2D2BQ6DHV5 1058 aa21.61■■□□□ 1.05
PKN1-209ENST00000587215 NLRP10Q86W26 655 aa21.61■■□□□ 1.05
PKN1-209ENST00000587215 MBIPQ9NS73 344 aa21.61■■□□□ 1.05
PKN1-209ENST00000587215 IARSP41252 1262 aaKnown RBP21.6■■□□□ 1.05
PKN1-209ENST00000587215 HDGFL1Q5TGJ6 251 aa21.6■■□□□ 1.05
PKN1-209ENST00000587215 DUSP27Q5VZP5 1158 aa21.6■■□□□ 1.05
PKN1-209ENST00000587215 SLC51AQ86UW1 340 aa21.6■■□□□ 1.05
PKN1-209ENST00000587215 PSMD1Q99460 953 aa21.6■■□□□ 1.05
PKN1-209ENST00000587215 CCDC184Q52MB2 194 aa21.59■■□□□ 1.05
PKN1-209ENST00000587215 FZD9O00144 591 aa21.58■■□□□ 1.05
PKN1-209ENST00000587215 TCERG1O14776 1098 aaKnown RBP21.58■■□□□ 1.05
PKN1-209ENST00000587215 POTEIP0CG38 1075 aa21.58■■□□□ 1.05
PKN1-209ENST00000587215 POTEJP0CG39 1038 aa21.58■■□□□ 1.05
PKN1-209ENST00000587215 KLRG1Q96E93 195 aa21.58■■□□□ 1.05
PKN1-209ENST00000587215 L3MBTL3Q96JM7 780 aaPredicted RBP21.58■■□□□ 1.05
PKN1-209ENST00000587215 DBF4Q9UBU7 674 aaPredicted RBP21.58■■□□□ 1.05
PKN1-209ENST00000587215 ZNF541Q9H0D2 1346 aa21.57■■□□□ 1.04
PKN1-209ENST00000587215 ANKRD13DQ6ZTN6 518 aa21.57■■□□□ 1.04
PKN1-209ENST00000587215 RNF123Q5XPI4 1314 aa21.56■■□□□ 1.04
PKN1-209ENST00000587215 PPEF1O14829 653 aaPredicted RBP21.56■■□□□ 1.04
PKN1-209ENST00000587215 HCLS1P14317 486 aaPredicted RBP21.56■■□□□ 1.04
PKN1-209ENST00000587215 GRIPAP1Q4V328 841 aa21.56■■□□□ 1.04
PKN1-209ENST00000587215 PLBD2Q8NHP8 589 aa21.56■■□□□ 1.04
PKN1-209ENST00000587215 IFT57Q9NWB7 429 aa21.56■■□□□ 1.04
PKN1-209ENST00000587215 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
PKN1-209ENST00000587215 GNAI1P63096 354 aa21.55■■□□□ 1.04
PKN1-209ENST00000587215 CHADLQ6NUI6 762 aa21.55■■□□□ 1.04
PKN1-209ENST00000587215 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
PKN1-209ENST00000587215 TAF1DQ9H5J8 278 aaPredicted RBP21.55■■□□□ 1.04
PKN1-209ENST00000587215 IQCA1LA6NCM1 817 aa21.54■■□□□ 1.04
PKN1-209ENST00000587215 ISCA1Q9BUE6 129 aa21.54■■□□□ 1.04
PKN1-209ENST00000587215 HYPKQ9NX55 129 aa21.54■■□□□ 1.04
PKN1-209ENST00000587215 ATP6V0A2Q9Y487 856 aa21.54■■□□□ 1.04
PKN1-209ENST00000587215 ABCC4O15439 1325 aa21.54■■□□□ 1.04
PKN1-209ENST00000587215 ELL2O00472 640 aaPredicted RBP21.53■■□□□ 1.04
PKN1-209ENST00000587215 JMYQ8N9B5 988 aa21.53■■□□□ 1.04
PKN1-209ENST00000587215 JDP2Q8WYK2 163 aa21.53■■□□□ 1.04
PKN1-209ENST00000587215 SH3TC1Q8TE82 1336 aa21.53■■□□□ 1.04
PKN1-209ENST00000587215 ATP5J2-PTCD1G3V325 749 aa21.52■■□□□ 1.04
PKN1-209ENST00000587215 BBOX1O75936 387 aa21.52■■□□□ 1.04
PKN1-209ENST00000587215 CALD1Q05682 793 aaKnown RBP21.52■■□□□ 1.04
PKN1-209ENST00000587215 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
PKN1-209ENST00000587215 ANKRD36CQ5JPF3 1778 aa21.51■■□□□ 1.03
PKN1-209ENST00000587215 COL4A5P29400 1685 aa21.51■■□□□ 1.03
PKN1-209ENST00000587215 ZEB1P37275 1124 aaPredicted RBP21.51■■□□□ 1.03
PKN1-209ENST00000587215 GPC2Q8N158 579 aa21.51■■□□□ 1.03
PKN1-209ENST00000587215 HACL1Q9UJ83 578 aa21.51■■□□□ 1.03
PKN1-209ENST00000587215 SP8Q8IXZ3 490 aa21.5■■□□□ 1.03
PKN1-209ENST00000587215 PHAXQ9H814 394 aaKnown RBP21.5■■□□□ 1.03
PKN1-209ENST00000587215 TRIM28Q13263 835 aaKnown RBP21.49■■□□□ 1.03
PKN1-209ENST00000587215 LDHDQ86WU2 507 aa21.49■■□□□ 1.03
PKN1-209ENST00000587215 LARGE2Q8N3Y3 721 aa21.49■■□□□ 1.03
PKN1-209ENST00000587215 FAM89AQ96GI7 184 aa21.49■■□□□ 1.03
PKN1-209ENST00000587215 SCN4AP35499 1836 aa21.49■■□□□ 1.03
PKN1-209ENST00000587215 EPHX2P34913 555 aa21.48■■□□□ 1.03
PKN1-209ENST00000587215 EIF6P56537 245 aaKnown RBP21.48■■□□□ 1.03
PKN1-209ENST00000587215 DDX46Q7L014 1031 aaKnown RBP21.48■■□□□ 1.03
PKN1-209ENST00000587215 RTFDC1Q9BY42 306 aaPredicted RBP21.48■■□□□ 1.03
PKN1-209ENST00000587215 TMX4Q9H1E5 349 aaPredicted RBP21.48■■□□□ 1.03
PKN1-209ENST00000587215 GRAPQ13588 217 aa21.47■■□□□ 1.03
PKN1-209ENST00000587215 EAPPQ56P03 285 aaPredicted RBP21.47■■□□□ 1.03
PKN1-209ENST00000587215 GRAPLQ8TC17 118 aaPredicted RBP21.47■■□□□ 1.03
PKN1-209ENST00000587215 VPS33BQ9H267 617 aa21.47■■□□□ 1.03
PKN1-209ENST00000587215 GJA3Q9Y6H8 435 aa21.47■■□□□ 1.03
PKN1-209ENST00000587215 LAMB2P55268 1798 aa21.46■■□□□ 1.03
PKN1-209ENST00000587215 ITGBL1O95965 494 aaPredicted RBP21.46■■□□□ 1.03
PKN1-209ENST00000587215 SF3B3Q15393 1217 aaKnown RBP21.46■■□□□ 1.03
PKN1-209ENST00000587215 RIC3Q7Z5B4 369 aa21.46■■□□□ 1.03
PKN1-209ENST00000587215 PPIP5K2O43314 1243 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 AOC3Q16853 763 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 CCDC27Q2M243 656 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 RTL5Q5HYW3 569 aaPredicted RBP21.45■■□□□ 1.02
PKN1-209ENST00000587215 MPNDQ8N594 471 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 PASKQ96RG2 1323 aa21.45■■□□□ 1.02
PKN1-209ENST00000587215 PCNTO95613 3336 aa21.44■■□□□ 1.02
PKN1-209ENST00000587215 ZNF316A6NFI3 1004 aaPredicted RBP21.44■■□□□ 1.02
PKN1-209ENST00000587215 IFFO2Q5TF58 517 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms