RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 TAF1P21675 1872 aa18.83■□□□□ 0.6
CXXC1-208ENST00000587170 MAP3K15Q6ZN16 1313 aa18.82■□□□□ 0.6
CXXC1-208ENST00000587170 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
CXXC1-208ENST00000587170 GRIPAP1Q4V328 841 aa18.82■□□□□ 0.6
CXXC1-208ENST00000587170 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
CXXC1-208ENST00000587170 DDX60Q8IY21 1712 aaKnown RBP18.81■□□□□ 0.6
CXXC1-208ENST00000587170 FAM177BA6PVY3 158 aa18.81■□□□□ 0.6
CXXC1-208ENST00000587170 MAP1SQ66K74 1059 aaPredicted RBP18.81■□□□□ 0.6
CXXC1-208ENST00000587170 JDP2Q8WYK2 163 aa18.81■□□□□ 0.6
CXXC1-208ENST00000587170 SCNN1DP51172 638 aa18.8■□□□□ 0.6
CXXC1-208ENST00000587170 CLEC11AQ9Y240 323 aa18.8■□□□□ 0.6
CXXC1-208ENST00000587170 HSPA8P11142 646 aaKnown RBP18.79■□□□□ 0.6
CXXC1-208ENST00000587170 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
CXXC1-208ENST00000587170 DEFB115Q30KQ5 88 aa18.79■□□□□ 0.6
CXXC1-208ENST00000587170 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
CXXC1-208ENST00000587170 DDX21Q9NR30 783 aaKnown RBP eCLIP18.79■□□□□ 0.6
CXXC1-208ENST00000587170 TNRC18O15417 2968 aaPredicted RBP18.79■□□□□ 0.6
CXXC1-208ENST00000587170 WDR33Q9C0J8 1336 aaKnown RBP18.78■□□□□ 0.6
CXXC1-208ENST00000587170 LBX1P52954 281 aa18.78■□□□□ 0.6
CXXC1-208ENST00000587170 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
CXXC1-208ENST00000587170 CRAMP1Q96RY5 1269 aa18.78■□□□□ 0.6
CXXC1-208ENST00000587170 ERBB4Q15303 1308 aa18.77■□□□□ 0.6
CXXC1-208ENST00000587170 NTSR2O95665 410 aa18.77■□□□□ 0.6
CXXC1-208ENST00000587170 EIF6P56537 245 aaKnown RBP18.77■□□□□ 0.6
CXXC1-208ENST00000587170 EIF4A1P60842 406 aaKnown RBP18.77■□□□□ 0.6
CXXC1-208ENST00000587170 MAP2K1Q02750 393 aaPredicted RBP18.77■□□□□ 0.6
CXXC1-208ENST00000587170 TTLL7Q6ZT98 887 aa18.77■□□□□ 0.6
CXXC1-208ENST00000587170 ZNF34Q8IZ26 560 aa18.77■□□□□ 0.6
CXXC1-208ENST00000587170 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
CXXC1-208ENST00000587170 MIS18AQ9NYP9 233 aa18.77■□□□□ 0.6
CXXC1-208ENST00000587170 POLR2AP24928 1970 aaKnown RBP18.77■□□□□ 0.59
CXXC1-208ENST00000587170 DUOX1Q9NRD9 1551 aa18.76■□□□□ 0.59
CXXC1-208ENST00000587170 CASP8AP2Q9UKL3 1982 aa18.76■□□□□ 0.59
CXXC1-208ENST00000587170 LMOD1P29536 600 aaPredicted RBP18.76■□□□□ 0.59
CXXC1-208ENST00000587170 KIF6Q6ZMV9 814 aa18.76■□□□□ 0.59
CXXC1-208ENST00000587170 USP50Q70EL3 339 aaPredicted RBP18.75■□□□□ 0.59
CXXC1-208ENST00000587170 SLC51AQ86UW1 340 aa18.75■□□□□ 0.59
CXXC1-208ENST00000587170 PPEF1O14829 653 aaPredicted RBP18.74■□□□□ 0.59
CXXC1-208ENST00000587170 EPS15P42566 896 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 SUSD4Q5VX71 490 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 GIGYF2Q6Y7W6 1299 aaKnown RBP18.74■□□□□ 0.59
CXXC1-208ENST00000587170 LARGE2Q8N3Y3 721 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 PLEKHF1Q96S99 279 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 VPS33BQ9H267 617 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 ABT1Q9ULW3 272 aaKnown RBP18.74■□□□□ 0.59
CXXC1-208ENST00000587170 GJA3Q9Y6H8 435 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 PSME4Q14997 1843 aa18.74■□□□□ 0.59
CXXC1-208ENST00000587170 GPTP24298 496 aa18.73■□□□□ 0.59
CXXC1-208ENST00000587170 C3orf67Q6ZVT6 689 aa18.73■□□□□ 0.59
CXXC1-208ENST00000587170 LRP10Q7Z4F1 713 aa18.73■□□□□ 0.59
CXXC1-208ENST00000587170 RBM17Q96I25 401 aaKnown RBP18.73■□□□□ 0.59
CXXC1-208ENST00000587170 ZBTB3Q9H5J0 574 aa18.73■□□□□ 0.59
CXXC1-208ENST00000587170 PARP10Q53GL7 1025 aa18.72■□□□□ 0.59
CXXC1-208ENST00000587170 ABHD8Q96I13 439 aa18.72■□□□□ 0.59
CXXC1-208ENST00000587170 CAPNS2Q96L46 248 aa18.72■□□□□ 0.59
CXXC1-208ENST00000587170 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
CXXC1-208ENST00000587170 CDHR2Q9BYE9 1310 aa18.72■□□□□ 0.59
CXXC1-208ENST00000587170 ECE1P42892 770 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 CST9Q5W186 159 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 NIM1KQ8IY84 436 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 NGEFQ8N5V2 710 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 RTFDC1Q9BY42 306 aaPredicted RBP18.71■□□□□ 0.59
CXXC1-208ENST00000587170 GPRC5DQ9NZD1 345 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 ATP6V0A2Q9Y487 856 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 TLL2Q9Y6L7 1015 aa18.71■□□□□ 0.59
CXXC1-208ENST00000587170 MYL6BP14649 208 aa18.7■□□□□ 0.58
CXXC1-208ENST00000587170 FMR1Q06787 632 aaKnown RBP eCLIP18.7■□□□□ 0.58
CXXC1-208ENST00000587170 SLC10A5Q5PT55 438 aa18.7■□□□□ 0.58
CXXC1-208ENST00000587170 AKAP11Q9UKA4 1901 aa18.7■□□□□ 0.58
CXXC1-208ENST00000587170 PPIP5K2O43314 1243 aa18.69■□□□□ 0.58
CXXC1-208ENST00000587170 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
CXXC1-208ENST00000587170 ADARB2Q9NS39 739 aaKnown RBP18.69■□□□□ 0.58
CXXC1-208ENST00000587170 ABCC4O15439 1325 aa18.69■□□□□ 0.58
CXXC1-208ENST00000587170 TRAF5O00463 557 aa18.68■□□□□ 0.58
CXXC1-208ENST00000587170 NEFMP07197 916 aa18.68■□□□□ 0.58
CXXC1-208ENST00000587170 PDIA6Q15084 440 aa18.68■□□□□ 0.58
CXXC1-208ENST00000587170 AOC3Q16853 763 aa18.68■□□□□ 0.58
CXXC1-208ENST00000587170 THUMPD2Q9BTF0 503 aaKnown RBP18.68■□□□□ 0.58
CXXC1-208ENST00000587170 PGAP2Q9UHJ9 254 aa18.68■□□□□ 0.58
CXXC1-208ENST00000587170 SCN9AQ15858 1988 aa18.68■□□□□ 0.58
CXXC1-208ENST00000587170 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
CXXC1-208ENST00000587170 HHIPL1Q96JK4 782 aa18.67■□□□□ 0.58
CXXC1-208ENST00000587170 NLRP3Q96P20 1036 aa18.67■□□□□ 0.58
CXXC1-208ENST00000587170 GPR101Q96P66 508 aaPredicted RBP18.67■□□□□ 0.58
CXXC1-208ENST00000587170 ZNRF3Q9ULT6 936 aa18.67■□□□□ 0.58
CXXC1-208ENST00000587170 PDE4DIPQ5VU43 2346 aa18.67■□□□□ 0.58
CXXC1-208ENST00000587170 MAP2K2P36507 400 aa18.66■□□□□ 0.58
CXXC1-208ENST00000587170 CXCL9Q07325 125 aa18.66■□□□□ 0.58
CXXC1-208ENST00000587170 SUPT20HQ8NEM7 779 aa18.66■□□□□ 0.58
CXXC1-208ENST00000587170 KIAA2012Q0VF49 1180 aa18.65■□□□□ 0.58
CXXC1-208ENST00000587170 SAPCD2Q86UD0 394 aa18.65■□□□□ 0.58
CXXC1-208ENST00000587170 UTP14AQ9BVJ6 771 aaKnown RBP18.65■□□□□ 0.58
CXXC1-208ENST00000587170 COL4A1P02462 1669 aa18.65■□□□□ 0.58
CXXC1-208ENST00000587170 SLC34A2O95436 690 aa18.64■□□□□ 0.57
CXXC1-208ENST00000587170 GMPSP49915 693 aaPredicted RBP18.64■□□□□ 0.57
CXXC1-208ENST00000587170 BEGAINQ9BUH8 593 aa18.64■□□□□ 0.57
CXXC1-208ENST00000587170 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
CXXC1-208ENST00000587170 TCERG1O14776 1098 aaKnown RBP18.63■□□□□ 0.57
CXXC1-208ENST00000587170 CA12O43570 354 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms