RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-208ENST00000587165 SALL2Q9Y467 1007 aaPredicted RBP6.57□□□□□ -1.36
LINC01140-208ENST00000587165 RIC1Q4ADV7 1423 aa6.57□□□□□ -1.36
LINC01140-208ENST00000587165 N4BP2Q86UW6 1770 aaPredicted RBP6.57□□□□□ -1.36
LINC01140-208ENST00000587165 ABCC12Q96J65 1359 aa6.57□□□□□ -1.36
LINC01140-208ENST00000587165 UBN2Q6ZU65 1347 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 LTBP3Q9NS15 1303 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 KLRG2A4D1S0 409 aaPredicted RBP6.56□□□□□ -1.36
LINC01140-208ENST00000587165 C1QTNF8P60827 252 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 TWISTNBQ3B726 338 aaPredicted RBP6.56□□□□□ -1.36
LINC01140-208ENST00000587165 CRY2Q49AN0 593 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 DDX46Q7L014 1031 aaKnown RBP6.56□□□□□ -1.36
LINC01140-208ENST00000587165 LRP10Q7Z4F1 713 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 NLRP10Q86W26 655 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
LINC01140-208ENST00000587165 UTRNP46939 3433 aa6.56□□□□□ -1.36
LINC01140-208ENST00000587165 FANCIQ9NVI1 1328 aa6.55□□□□□ -1.36
LINC01140-208ENST00000587165 PPEF1O14829 653 aaPredicted RBP6.55□□□□□ -1.36
LINC01140-208ENST00000587165 FKBP4Q02790 459 aaKnown RBP eCLIP6.55□□□□□ -1.36
LINC01140-208ENST00000587165 TMC4Q7Z404 712 aa6.55□□□□□ -1.36
LINC01140-208ENST00000587165 C8orf58Q8NAV2 365 aa6.55□□□□□ -1.36
LINC01140-208ENST00000587165 JDP2Q8WYK2 163 aa6.55□□□□□ -1.36
LINC01140-208ENST00000587165 CRAMP1Q96RY5 1269 aa6.55□□□□□ -1.36
LINC01140-208ENST00000587165 KIAA1551Q9HCM1 1747 aa6.55□□□□□ -1.36
LINC01140-208ENST00000587165 AFDNP55196 1824 aaKnown RBP6.55□□□□□ -1.36
LINC01140-208ENST00000587165 GOLGB1Q14789 3259 aaKnown RBP6.54□□□□□ -1.36
LINC01140-208ENST00000587165 SENP3-EIF4A1A0A087X0R7 540 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 ATP5J2-PTCD1G3V325 749 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 CCER2I3L3R5 266 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 NFKBIEO00221 500 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 HCLS1P14317 486 aaPredicted RBP6.54□□□□□ -1.36
LINC01140-208ENST00000587165 HOXA10P31260 410 aaPredicted RBP6.54□□□□□ -1.36
LINC01140-208ENST00000587165 TRIM28Q13263 835 aaKnown RBP6.54□□□□□ -1.36
LINC01140-208ENST00000587165 SLC10A5Q5PT55 438 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 CCDC191Q8NCU4 936 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 SUPT20HQ8NEM7 779 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 MYD88Q99836 296 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 CWC25Q9NXE8 425 aaPredicted RBP6.54□□□□□ -1.36
LINC01140-208ENST00000587165 ARFGEF1Q9Y6D6 1849 aa6.54□□□□□ -1.36
LINC01140-208ENST00000587165 IQCA1LA6NCM1 817 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 GLTPD2A6NH11 291 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 E9PSI1 815 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 IRS4O14654 1257 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 BBOX1O75936 387 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 TOMM70O94826 608 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 SLC4A2P04920 1241 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 FKBP5Q13451 457 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 GRAPQ13588 217 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 KSR2Q6VAB6 950 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 TSPYL6Q8N831 410 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 ZBTB38Q8NAP3 1195 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 GRAPLQ8TC17 118 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 PSMD1Q99460 953 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 ISCA1Q9BUE6 129 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 METTL22Q9BUU2 404 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 PHAXQ9H814 394 aaKnown RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 NMRK2Q9NPI5 230 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 ZNF277Q9NRM2 450 aaPredicted RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 MAP3K2Q9Y2U5 619 aa6.53□□□□□ -1.36
LINC01140-208ENST00000587165 BRCA1P38398 1863 aaKnown RBP6.53□□□□□ -1.36
LINC01140-208ENST00000587165 DLEC1Q9Y238 1755 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 PI4KAP2A4QPH2 592 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 TCERG1O14776 1098 aaKnown RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 PCCAP05165 728 aaPredicted RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 VEGFAP15692 232 aaPredicted RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 IARSP41252 1262 aaKnown RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 EIF6P56537 245 aaKnown RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 EXOSC9Q06265 439 aaKnown RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 FLIIQ13045 1269 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 CCDC152Q4G0S7 254 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 DPP8Q6V1X1 898 aaPredicted RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 NIM1KQ8IY84 436 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 SYNE4Q8N205 404 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 LARGE2Q8N3Y3 721 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 PI4KAP1Q8N8J0 262 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 RBM46Q8TBY0 533 aaKnown RBP6.52□□□□□ -1.37
LINC01140-208ENST00000587165 C7orf43Q8WVR3 580 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 FAM89AQ96GI7 184 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 ATP6V0A2Q9Y487 856 aa6.52□□□□□ -1.37
LINC01140-208ENST00000587165 ABCC4O15439 1325 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 ANKRD31Q8N7Z5 1873 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 COL11A2P13942 1736 aaPredicted RBP6.51□□□□□ -1.37
LINC01140-208ENST00000587165 KIF3CO14782 793 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 PPIP5K2O43314 1243 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 LMOD1P29536 600 aaPredicted RBP6.51□□□□□ -1.37
LINC01140-208ENST00000587165 FSTL1Q12841 308 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 SF3B3Q15393 1217 aaKnown RBP6.51□□□□□ -1.37
LINC01140-208ENST00000587165 RTL5Q5HYW3 569 aaPredicted RBP6.51□□□□□ -1.37
LINC01140-208ENST00000587165 SP8Q8IXZ3 490 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 MPNDQ8N594 471 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 SMC1BQ8NDV3 1235 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 DNAAF4Q8WXU2 420 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 CDC5LQ99459 802 aaKnown RBP6.51□□□□□ -1.37
LINC01140-208ENST00000587165 VPS33BQ9H267 617 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 RRAGCQ9HB90 399 aa6.51□□□□□ -1.37
LINC01140-208ENST00000587165 CDHR2Q9BYE9 1310 aa6.5□□□□□ -1.37
LINC01140-208ENST00000587165 NUP98P52948 1817 aa6.5□□□□□ -1.37
LINC01140-208ENST00000587165 G3V3G9 751 aa6.5□□□□□ -1.37
LINC01140-208ENST00000587165 PDE8AO60658 829 aa6.5□□□□□ -1.37
LINC01140-208ENST00000587165 VAMP4O75379 141 aa6.5□□□□□ -1.37
LINC01140-208ENST00000587165 HSPA6P17066 643 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms