RNA–Protein interactions for RNA: ENST00000587098.1

CCDC130-207, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 617 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-207ENST00000587098 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
CCDC130-207ENST00000587098 ZNF428Q96B54 188 aa18.84■□□□□ 0.61
CCDC130-207ENST00000587098 DLEC1Q9Y238 1755 aa18.83■□□□□ 0.61
CCDC130-207ENST00000587098 NPR1P16066 1061 aa18.83■□□□□ 0.6
CCDC130-207ENST00000587098 SYNE4Q8N205 404 aa18.83■□□□□ 0.6
CCDC130-207ENST00000587098 SLC10A5Q5PT55 438 aa18.82■□□□□ 0.6
CCDC130-207ENST00000587098 ZNF219Q9P2Y4 722 aaPredicted RBP18.82■□□□□ 0.6
CCDC130-207ENST00000587098 TRMT112Q9UI30 125 aaKnown RBP18.82■□□□□ 0.6
CCDC130-207ENST00000587098 COL11A2P13942 1736 aaPredicted RBP18.82■□□□□ 0.6
CCDC130-207ENST00000587098 E9PSI1 815 aa18.81■□□□□ 0.6
CCDC130-207ENST00000587098 DDX58O95786 925 aaKnown RBP18.81■□□□□ 0.6
CCDC130-207ENST00000587098 SLFN5Q08AF3 891 aa18.81■□□□□ 0.6
CCDC130-207ENST00000587098 TRIM28Q13263 835 aaKnown RBP18.81■□□□□ 0.6
CCDC130-207ENST00000587098 CDCA7LQ96GN5 454 aa18.81■□□□□ 0.6
CCDC130-207ENST00000587098 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
CCDC130-207ENST00000587098 PI4KAP2A4QPH2 592 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 C21orf2O43822 256 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 CRY2Q49AN0 593 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 PRPF40BQ6NWY9 871 aaKnown RBP18.8■□□□□ 0.6
CCDC130-207ENST00000587098 KSR2Q6VAB6 950 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 C3orf67Q6ZVT6 689 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 PI4KAP1Q8N8J0 262 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
CCDC130-207ENST00000587098 MYD88Q99836 296 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 METTL22Q9BUU2 404 aaPredicted RBP18.8■□□□□ 0.6
CCDC130-207ENST00000587098 MAP3K2Q9Y2U5 619 aa18.8■□□□□ 0.6
CCDC130-207ENST00000587098 SLX4Q8IY92 1834 aa18.79■□□□□ 0.6
CCDC130-207ENST00000587098 RNF123Q5XPI4 1314 aa18.79■□□□□ 0.6
CCDC130-207ENST00000587098 HCLS1P14317 486 aaPredicted RBP18.79■□□□□ 0.6
CCDC130-207ENST00000587098 NLRP3Q96P20 1036 aa18.79■□□□□ 0.6
CCDC130-207ENST00000587098 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
CCDC130-207ENST00000587098 RIC1Q4ADV7 1423 aa18.78■□□□□ 0.6
CCDC130-207ENST00000587098 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
CCDC130-207ENST00000587098 FLIIQ13045 1269 aa18.78■□□□□ 0.6
CCDC130-207ENST00000587098 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
CCDC130-207ENST00000587098 TNRC6CQ9HCJ0 1690 aaKnown RBP18.78■□□□□ 0.6
CCDC130-207ENST00000587098 ARFGEF2Q9Y6D5 1785 aa18.78■□□□□ 0.6
CCDC130-207ENST00000587098 HOXA10P31260 410 aaPredicted RBP18.77■□□□□ 0.6
CCDC130-207ENST00000587098 RASSF7Q02833 373 aa18.77■□□□□ 0.6
CCDC130-207ENST00000587098 C7orf43Q8WVR3 580 aa18.77■□□□□ 0.6
CCDC130-207ENST00000587098 RPGRQ92834 1020 aaKnown RBP18.77■□□□□ 0.6
CCDC130-207ENST00000587098 ADCY9O60503 1353 aa18.77■□□□□ 0.6
CCDC130-207ENST00000587098 CACNA1FO60840 1977 aa18.77■□□□□ 0.59
CCDC130-207ENST00000587098 RTL5Q5HYW3 569 aaPredicted RBP18.76■□□□□ 0.59
CCDC130-207ENST00000587098 C9orf131Q5VYM1 1079 aa18.76■□□□□ 0.59
CCDC130-207ENST00000587098 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
CCDC130-207ENST00000587098 CCDC191Q8NCU4 936 aa18.76■□□□□ 0.59
CCDC130-207ENST00000587098 NFKBIEO00221 500 aa18.75■□□□□ 0.59
CCDC130-207ENST00000587098 PRELPP51888 382 aa18.75■□□□□ 0.59
CCDC130-207ENST00000587098 RBM17Q96I25 401 aaKnown RBP18.75■□□□□ 0.59
CCDC130-207ENST00000587098 CACNA1SQ13698 1873 aa18.75■□□□□ 0.59
CCDC130-207ENST00000587098 IGKV5-2P06315 115 aa18.74■□□□□ 0.59
CCDC130-207ENST00000587098 FKBP5Q13451 457 aaPredicted RBP18.74■□□□□ 0.59
CCDC130-207ENST00000587098 OLFM4Q6UX06 510 aa18.74■□□□□ 0.59
CCDC130-207ENST00000587098 ZBTB38Q8NAP3 1195 aaPredicted RBP18.74■□□□□ 0.59
CCDC130-207ENST00000587098 CRAMP1Q96RY5 1269 aa18.74■□□□□ 0.59
CCDC130-207ENST00000587098 CWC25Q9NXE8 425 aaPredicted RBP18.74■□□□□ 0.59
CCDC130-207ENST00000587098 IRS4O14654 1257 aaPredicted RBP18.73■□□□□ 0.59
CCDC130-207ENST00000587098 JARID2Q92833 1246 aaPredicted RBP18.73■□□□□ 0.59
CCDC130-207ENST00000587098 RNF181Q9P0P0 153 aa18.73■□□□□ 0.59
CCDC130-207ENST00000587098 SBF1O95248 1867 aa18.73■□□□□ 0.59
CCDC130-207ENST00000587098 NEXNQ0ZGT2 675 aa18.72■□□□□ 0.59
CCDC130-207ENST00000587098 SOGA3Q5TF21 947 aa18.72■□□□□ 0.59
CCDC130-207ENST00000587098 DNAAF4Q8WXU2 420 aa18.72■□□□□ 0.59
CCDC130-207ENST00000587098 PCCAP05165 728 aaPredicted RBP18.71■□□□□ 0.59
CCDC130-207ENST00000587098 LMNB1P20700 586 aa18.71■□□□□ 0.59
CCDC130-207ENST00000587098 CWF19L2Q2TBE0 894 aaKnown RBP18.71■□□□□ 0.59
CCDC130-207ENST00000587098 CCDC93Q567U6 631 aa18.71■□□□□ 0.59
CCDC130-207ENST00000587098 NEURL1BA8MQ27 555 aa18.7■□□□□ 0.58
CCDC130-207ENST00000587098 F6X3S4 739 aa18.7■□□□□ 0.58
CCDC130-207ENST00000587098 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC130-207ENST00000587098 SF3B3Q15393 1217 aaKnown RBP18.7■□□□□ 0.58
CCDC130-207ENST00000587098 FER1L6Q2WGJ9 1857 aa18.7■□□□□ 0.58
CCDC130-207ENST00000587098 MRPL50Q8N5N7 158 aaKnown RBP18.7■□□□□ 0.58
CCDC130-207ENST00000587098 ABCC4O15439 1325 aa18.7■□□□□ 0.58
CCDC130-207ENST00000587098 DDX46Q7L014 1031 aaKnown RBP18.69■□□□□ 0.58
CCDC130-207ENST00000587098 SLC51AQ86UW1 340 aa18.69■□□□□ 0.58
CCDC130-207ENST00000587098 ZNF526Q8TF50 670 aaPredicted RBP18.69■□□□□ 0.58
CCDC130-207ENST00000587098 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
CCDC130-207ENST00000587098 TAOK3Q9H2K8 898 aa18.69■□□□□ 0.58
CCDC130-207ENST00000587098 LTBP3Q9NS15 1303 aa18.69■□□□□ 0.58
CCDC130-207ENST00000587098 CCDC88AQ3V6T2 1871 aa18.69■□□□□ 0.58
CCDC130-207ENST00000587098 LAMB2P55268 1798 aa18.68■□□□□ 0.58
CCDC130-207ENST00000587098 PPEF1O14829 653 aaPredicted RBP18.68■□□□□ 0.58
CCDC130-207ENST00000587098 RTKN2Q8IZC4 609 aa18.68■□□□□ 0.58
CCDC130-207ENST00000587098 DDX60Q8IY21 1712 aaKnown RBP18.68■□□□□ 0.58
CCDC130-207ENST00000587098 H7C1W4 665 aa18.67■□□□□ 0.58
CCDC130-207ENST00000587098 BBOX1O75936 387 aa18.67■□□□□ 0.58
CCDC130-207ENST00000587098 CC2D2BQ6DHV5 1058 aa18.67■□□□□ 0.58
CCDC130-207ENST00000587098 LINS1Q8NG48 757 aa18.67■□□□□ 0.58
CCDC130-207ENST00000587098 PDE8AO60658 829 aa18.66■□□□□ 0.58
CCDC130-207ENST00000587098 HSP90B1P14625 803 aaKnown RBP18.66■□□□□ 0.58
CCDC130-207ENST00000587098 FKBP4Q02790 459 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCDC130-207ENST00000587098 GRAPQ13588 217 aa18.66■□□□□ 0.58
CCDC130-207ENST00000587098 GCKRQ14397 625 aa18.66■□□□□ 0.58
CCDC130-207ENST00000587098 BEND3Q5T5X7 828 aa18.66■□□□□ 0.58
CCDC130-207ENST00000587098 GRAPLQ8TC17 118 aaPredicted RBP18.66■□□□□ 0.58
CCDC130-207ENST00000587098 GPBP1L1Q9HC44 474 aaPredicted RBP18.66■□□□□ 0.58
CCDC130-207ENST00000587098 TAF1P21675 1872 aa18.65■□□□□ 0.58
CCDC130-207ENST00000587098 BCL2L13Q9BXK5 485 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms