RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 TMX4Q9H1E5 349 aaPredicted RBP26.11■■□□□ 1.77
VAT1-203ENST00000587062 KDM2BQ8NHM5 1336 aa26.11■■□□□ 1.77
VAT1-203ENST00000587062 COL11A2P13942 1736 aaPredicted RBP26.11■■□□□ 1.77
VAT1-203ENST00000587062 SENP3-EIF4A1A0A087X0R7 540 aa26.1■■□□□ 1.77
VAT1-203ENST00000587062 RASSF7Q02833 373 aa26.1■■□□□ 1.77
VAT1-203ENST00000587062 TSR2Q969E8 191 aaKnown RBP26.1■■□□□ 1.77
VAT1-203ENST00000587062 TRMT112Q9UI30 125 aaKnown RBP26.1■■□□□ 1.77
VAT1-203ENST00000587062 RIC1Q4ADV7 1423 aa26.1■■□□□ 1.77
VAT1-203ENST00000587062 C1QTNF8P60827 252 aa26.09■■□□□ 1.77
VAT1-203ENST00000587062 CRY2Q49AN0 593 aa26.09■■□□□ 1.77
VAT1-203ENST00000587062 CCDC93Q567U6 631 aa26.09■■□□□ 1.77
VAT1-203ENST00000587062 NLRP10Q86W26 655 aa26.09■■□□□ 1.77
VAT1-203ENST00000587062 TAOK3Q9H2K8 898 aa26.09■■□□□ 1.77
VAT1-203ENST00000587062 TWISTNBQ3B726 338 aaPredicted RBP26.08■■□□□ 1.77
VAT1-203ENST00000587062 SLC10A5Q5PT55 438 aa26.08■■□□□ 1.77
VAT1-203ENST00000587062 RTKN2Q8IZC4 609 aa26.08■■□□□ 1.77
VAT1-203ENST00000587062 GRIPAP1Q4V328 841 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 CC2D2BQ6DHV5 1058 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 MYH16Q9H6N6 1097 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 SH3TC1Q8TE82 1336 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 LTBP3Q9NS15 1303 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 ANKRD36CQ5JPF3 1778 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 ABCC12Q96J65 1359 aa26.07■■□□□ 1.76
VAT1-203ENST00000587062 SBF1O95248 1867 aa26.06■■□□□ 1.76
VAT1-203ENST00000587062 ARFGEF2Q9Y6D5 1785 aa26.06■■□□□ 1.76
VAT1-203ENST00000587062 HSP90B1P14625 803 aaKnown RBP26.06■■□□□ 1.76
VAT1-203ENST00000587062 DPY19L2Q6NUT2 758 aa26.06■■□□□ 1.76
VAT1-203ENST00000587062 SLX4Q8IY92 1834 aa26.05■■□□□ 1.76
VAT1-203ENST00000587062 CACNA1SQ13698 1873 aa26.05■■□□□ 1.76
VAT1-203ENST00000587062 NFKBIEO00221 500 aa26.05■■□□□ 1.76
VAT1-203ENST00000587062 HOXA10P31260 410 aaPredicted RBP26.05■■□□□ 1.76
VAT1-203ENST00000587062 CRAMP1Q96RY5 1269 aa26.05■■□□□ 1.76
VAT1-203ENST00000587062 PHAXQ9H814 394 aaKnown RBP26.04■■□□□ 1.76
VAT1-203ENST00000587062 TRIM28Q13263 835 aaKnown RBP26.03■■□□□ 1.76
VAT1-203ENST00000587062 C16orf71Q8IYS4 520 aaPredicted RBP26.03■■□□□ 1.76
VAT1-203ENST00000587062 TSPYL6Q8N831 410 aa26.03■■□□□ 1.76
VAT1-203ENST00000587062 C7orf43Q8WVR3 580 aa26.02■■□□□ 1.76
VAT1-203ENST00000587062 ISCA1Q9BUE6 129 aa26.02■■□□□ 1.76
VAT1-203ENST00000587062 FANCIQ9NVI1 1328 aa26.01■■□□□ 1.75
VAT1-203ENST00000587062 FER1L6Q2WGJ9 1857 aa26■■□□□ 1.75
VAT1-203ENST00000587062 ATP5J2-PTCD1G3V325 749 aa26■■□□□ 1.75
VAT1-203ENST00000587062 FKBP4Q02790 459 aaKnown RBP eCLIP26■■□□□ 1.75
VAT1-203ENST00000587062 NEXNQ0ZGT2 675 aa26■■□□□ 1.75
VAT1-203ENST00000587062 DDX46Q7L014 1031 aaKnown RBP26■■□□□ 1.75
VAT1-203ENST00000587062 CCER2I3L3R5 266 aa25.99■■□□□ 1.75
VAT1-203ENST00000587062 CCDC88AQ3V6T2 1871 aa25.99■■□□□ 1.75
VAT1-203ENST00000587062 GLTPD2A6NH11 291 aa25.98■■□□□ 1.75
VAT1-203ENST00000587062 SLC4A2P04920 1241 aa25.98■■□□□ 1.75
VAT1-203ENST00000587062 HCLS1P14317 486 aaPredicted RBP25.98■■□□□ 1.75
VAT1-203ENST00000587062 KSR2Q6VAB6 950 aa25.98■■□□□ 1.75
VAT1-203ENST00000587062 CCDC191Q8NCU4 936 aa25.98■■□□□ 1.75
VAT1-203ENST00000587062 MYD88Q99836 296 aa25.98■■□□□ 1.75
VAT1-203ENST00000587062 TNRC6CQ9HCJ0 1690 aaKnown RBP25.98■■□□□ 1.75
VAT1-203ENST00000587062 PPEF1O14829 653 aaPredicted RBP25.97■■□□□ 1.75
VAT1-203ENST00000587062 BBOX1O75936 387 aa25.97■■□□□ 1.75
VAT1-203ENST00000587062 METTL22Q9BUU2 404 aaPredicted RBP25.97■■□□□ 1.75
VAT1-203ENST00000587062 KIF3CO14782 793 aa25.96■■□□□ 1.75
VAT1-203ENST00000587062 TOMM70O94826 608 aa25.96■■□□□ 1.75
VAT1-203ENST00000587062 FAM89AQ96GI7 184 aa25.96■■□□□ 1.75
VAT1-203ENST00000587062 EXOSC9Q06265 439 aaKnown RBP25.95■■□□□ 1.74
VAT1-203ENST00000587062 ZBTB38Q8NAP3 1195 aaPredicted RBP25.95■■□□□ 1.74
VAT1-203ENST00000587062 PSMD1Q99460 953 aa25.95■■□□□ 1.74
VAT1-203ENST00000587062 NMRK2Q9NPI5 230 aa25.95■■□□□ 1.74
VAT1-203ENST00000587062 CWC25Q9NXE8 425 aaPredicted RBP25.95■■□□□ 1.74
VAT1-203ENST00000587062 MAP3K2Q9Y2U5 619 aa25.95■■□□□ 1.74
VAT1-203ENST00000587062 TMC4Q7Z404 712 aa25.94■■□□□ 1.74
VAT1-203ENST00000587062 SYNE4Q8N205 404 aa25.94■■□□□ 1.74
VAT1-203ENST00000587062 RRAGCQ9HB90 399 aa25.94■■□□□ 1.74
VAT1-203ENST00000587062 DICER1Q9UPY3 1922 aaKnown RBP25.93■■□□□ 1.74
VAT1-203ENST00000587062 PI4KAP2A4QPH2 592 aa25.93■■□□□ 1.74
VAT1-203ENST00000587062 TCERG1O14776 1098 aaKnown RBP25.93■■□□□ 1.74
VAT1-203ENST00000587062 VAMP4O75379 141 aa25.93■■□□□ 1.74
VAT1-203ENST00000587062 PRELPP51888 382 aa25.93■■□□□ 1.74
VAT1-203ENST00000587062 PI4KAP1Q8N8J0 262 aa25.93■■□□□ 1.74
VAT1-203ENST00000587062 JDP2Q8WYK2 163 aa25.93■■□□□ 1.74
VAT1-203ENST00000587062 IRS4O14654 1257 aaPredicted RBP25.92■■□□□ 1.74
VAT1-203ENST00000587062 VEGFAP15692 232 aaPredicted RBP25.92■■□□□ 1.74
VAT1-203ENST00000587062 C3orf67Q6ZVT6 689 aa25.92■■□□□ 1.74
VAT1-203ENST00000587062 SUPT20HQ8NEM7 779 aa25.92■■□□□ 1.74
VAT1-203ENST00000587062 ATP6V0A2Q9Y487 856 aa25.92■■□□□ 1.74
VAT1-203ENST00000587062 IARSP41252 1262 aaKnown RBP25.91■■□□□ 1.74
VAT1-203ENST00000587062 GRAPQ13588 217 aa25.91■■□□□ 1.74
VAT1-203ENST00000587062 RTL5Q5HYW3 569 aaPredicted RBP25.91■■□□□ 1.74
VAT1-203ENST00000587062 GRAPLQ8TC17 118 aaPredicted RBP25.91■■□□□ 1.74
VAT1-203ENST00000587062 ZNF277Q9NRM2 450 aaPredicted RBP25.91■■□□□ 1.74
VAT1-203ENST00000587062 CACNA1FO60840 1977 aa25.91■■□□□ 1.74
VAT1-203ENST00000587062 TIAM2Q8IVF5 1701 aa25.91■■□□□ 1.74
VAT1-203ENST00000587062 ABCC4O15439 1325 aa25.9■■□□□ 1.74
VAT1-203ENST00000587062 PCCAP05165 728 aaPredicted RBP25.9■■□□□ 1.74
VAT1-203ENST00000587062 FLIIQ13045 1269 aa25.9■■□□□ 1.74
VAT1-203ENST00000587062 FKBP5Q13451 457 aaPredicted RBP25.9■■□□□ 1.74
VAT1-203ENST00000587062 SF3B3Q15393 1217 aaKnown RBP25.9■■□□□ 1.74
VAT1-203ENST00000587062 SP8Q8IXZ3 490 aa25.9■■□□□ 1.74
VAT1-203ENST00000587062 OLFM4Q6UX06 510 aa25.89■■□□□ 1.74
VAT1-203ENST00000587062 ZNF428Q96B54 188 aa25.89■■□□□ 1.74
VAT1-203ENST00000587062 VPS33BQ9H267 617 aa25.89■■□□□ 1.74
VAT1-203ENST00000587062 RBM46Q8TBY0 533 aaKnown RBP25.88■■□□□ 1.73
VAT1-203ENST00000587062 E9PSI1 815 aa25.87■■□□□ 1.73
VAT1-203ENST00000587062 PDE8AO60658 829 aa25.87■■□□□ 1.73
VAT1-203ENST00000587062 DPP8Q6V1X1 898 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms