RNA–Protein interactions for RNA: ENST00000586944.5

PTBP1-210, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 4,661 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-210ENST00000586944 DDX19AQ9NUU7 478 aaKnown RBP20.26■□□□□ 0.83
PTBP1-210ENST00000586944 SLC5A1P13866 664 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 ZNF165P49910 485 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 TEX35Q5T0J7 233 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 NBPF7P0C2Y1 421 aaPredicted RBP20.25■□□□□ 0.83
PTBP1-210ENST00000586944 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 KLHDC4Q8TBB5 520 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 SMARCE1Q969G3 411 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 BICC1Q9H694 974 aaKnown RBP20.25■□□□□ 0.83
PTBP1-210ENST00000586944 USP19O94966 1318 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 YEATS2Q9ULM3 1422 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 EPS15P42566 896 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 KLHL34Q8N239 644 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
PTBP1-210ENST00000586944 GOLGA8AA7E2F4 631 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 ZNF652Q9Y2D9 606 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 LTKP29376 864 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 KLHL10Q6JEL2 608 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 PLEKHF1Q96S99 279 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 NPHP3Q7Z494 1330 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 SBNO1A3KN83 1393 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 TTC37Q6PGP7 1564 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 TRPM2O94759 1503 aa20.24■□□□□ 0.83
PTBP1-210ENST00000586944 ZNF830Q96NB3 372 aaPredicted RBP20.24■□□□□ 0.83
PTBP1-210ENST00000586944 TTC41PQ6P2S7 1318 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 SMTNL1A8MU46 457 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 ISM2Q6H9L7 571 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 MCMDC2Q4G0Z9 681 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 CLIP2Q9UDT6 1046 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 MYO5CQ9NQX4 1742 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 CAGE1Q8TC20 777 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 CCP110O43303 1012 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 Q6ZUG5 572 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 CHST3Q7LGC8 479 aa20.23■□□□□ 0.83
PTBP1-210ENST00000586944 CBFA2T2O43439 604 aa20.22■□□□□ 0.83
PTBP1-210ENST00000586944 F13A1P00488 732 aa20.22■□□□□ 0.83
PTBP1-210ENST00000586944 ZHX3Q9H4I2 956 aa20.22■□□□□ 0.83
PTBP1-210ENST00000586944 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
PTBP1-210ENST00000586944 TEX13AQ9BXU3 409 aaPredicted RBP20.22■□□□□ 0.83
PTBP1-210ENST00000586944 C19orf44Q9H6X5 657 aa20.22■□□□□ 0.83
PTBP1-210ENST00000586944 IQSEC3Q9UPP2 1182 aaPredicted RBP20.22■□□□□ 0.83
PTBP1-210ENST00000586944 SFPQP23246 707 aaKnown RBP eCLIP20.22■□□□□ 0.834e-7■■□□□ 12.7
PTBP1-210ENST00000586944 NBPF6Q5VWK0 638 aa20.22■□□□□ 0.83
PTBP1-210ENST00000586944 CCAR1Q8IX12 1150 aaKnown RBP20.22■□□□□ 0.83
PTBP1-210ENST00000586944 NBPF4Q96M43 638 aa20.22■□□□□ 0.83
PTBP1-210ENST00000586944 KLF18A0A0U1RQI7 1052 aa20.21■□□□□ 0.83
PTBP1-210ENST00000586944 TFCP2Q12800 502 aa20.21■□□□□ 0.83
PTBP1-210ENST00000586944 CREB3L3Q68CJ9 461 aa20.21■□□□□ 0.83
PTBP1-210ENST00000586944 KDM5AP29375 1690 aaKnown RBP20.21■□□□□ 0.83
PTBP1-210ENST00000586944 KRT18P05783 430 aaKnown RBP20.21■□□□□ 0.83
PTBP1-210ENST00000586944 TMEM67Q5HYA8 995 aa20.21■□□□□ 0.83
PTBP1-210ENST00000586944 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
PTBP1-210ENST00000586944 HSP90B2PQ58FF3 399 aa20.21■□□□□ 0.83
PTBP1-210ENST00000586944 NCOA7Q8NI08 942 aa20.21■□□□□ 0.83
PTBP1-210ENST00000586944 CCDC196A0A1B0GTZ2 297 aa20.2■□□□□ 0.82
PTBP1-210ENST00000586944 ATP2B3Q16720 1220 aa20.2■□□□□ 0.82
PTBP1-210ENST00000586944 PLEKHG3A1L390 1219 aa20.2■□□□□ 0.82
PTBP1-210ENST00000586944 SSBP05455 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
PTBP1-210ENST00000586944 IL15P40933 162 aaPredicted RBP20.2■□□□□ 0.82
PTBP1-210ENST00000586944 TRMT1Q9NXH9 659 aaKnown RBP20.2■□□□□ 0.82
PTBP1-210ENST00000586944 DACT1Q9NYF0 836 aa20.2■□□□□ 0.82
PTBP1-210ENST00000586944 USP5P45974 858 aa20.2■□□□□ 0.82
PTBP1-210ENST00000586944 ZPR1O75312 459 aa20.19■□□□□ 0.82
PTBP1-210ENST00000586944 C16orf45Q96MC5 204 aaPredicted RBP20.19■□□□□ 0.82
PTBP1-210ENST00000586944 MKNK2Q9HBH9 465 aa20.19■□□□□ 0.82
PTBP1-210ENST00000586944 STIM1Q13586 685 aa20.19■□□□□ 0.82
PTBP1-210ENST00000586944 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
PTBP1-210ENST00000586944 RBM5P52756 815 aaKnown RBP eCLIP20.18■□□□□ 0.821e-6■■□□□ 11.4
PTBP1-210ENST00000586944 CTAGE5O15320 804 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 MCM5P33992 734 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 HSPA2P54652 639 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 ZNF790Q6PG37 636 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 GSPT1P15170 499 aaKnown RBP20.18■□□□□ 0.82
PTBP1-210ENST00000586944 METAP2P50579 478 aaKnown RBP eCLIP20.18■□□□□ 0.824e-8■■□□□ 13
PTBP1-210ENST00000586944 CTCFLQ8NI51 663 aaPredicted RBP20.18■□□□□ 0.82
PTBP1-210ENST00000586944 PAG1Q9NWQ8 432 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 ANKIB1Q9P2G1 1089 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 ABCC4O15439 1325 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 SYT1P21579 422 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 TIMM10P62072 90 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 SSRP1Q08945 709 aaKnown RBP20.18■□□□□ 0.82
PTBP1-210ENST00000586944 PTPN14Q15678 1187 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 CNNM3Q8NE01 707 aa20.18■□□□□ 0.82
PTBP1-210ENST00000586944 SLC4A8Q2Y0W8 1093 aa20.17■□□□□ 0.82
PTBP1-210ENST00000586944 ZSCAN29Q8IWY8 852 aaPredicted RBP20.17■□□□□ 0.82
PTBP1-210ENST00000586944 DZIP1Q86YF9 867 aaKnown RBP20.17■□□□□ 0.82
PTBP1-210ENST00000586944 ZNHIT6Q9NWK9 470 aaKnown RBP20.17■□□□□ 0.82
PTBP1-210ENST00000586944 DHX8Q14562 1220 aaKnown RBP20.17■□□□□ 0.82
PTBP1-210ENST00000586944 TTF1Q15361 905 aaPredicted RBP20.17■□□□□ 0.82
PTBP1-210ENST00000586944 IL17REQ8NFR9 667 aa20.17■□□□□ 0.82
PTBP1-210ENST00000586944 HELBQ8NG08 1087 aaPredicted RBP20.17■□□□□ 0.82
PTBP1-210ENST00000586944 DCAF5Q96JK2 942 aa20.17■□□□□ 0.82
PTBP1-210ENST00000586944 SLC9C2Q5TAH2 1124 aa20.17■□□□□ 0.82
PTBP1-210ENST00000586944 SLC26A6Q9BXS9 759 aa20.17■□□□□ 0.82
PTBP1-210ENST00000586944 CEP131Q9UPN4 1083 aa20.17■□□□□ 0.82
PTBP1-210ENST00000586944 INTS4Q96HW7 963 aaKnown RBP20.16■□□□□ 0.82
PTBP1-210ENST00000586944 KCNQ3O43525 872 aa20.16■□□□□ 0.82
PTBP1-210ENST00000586944 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
PTBP1-210ENST00000586944 ZSCAN16Q9H4T2 348 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms