RNA–Protein interactions for RNA: ENST00000586193.5

TPM4-203, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-203ENST00000586193 PGPEP1Q9NXJ5 209 aa9.26□□□□□ -0.93
TPM4-203ENST00000586193 DMGDHQ9UI17 866 aaKnown RBP9.26□□□□□ -0.93
TPM4-203ENST00000586193 FOXD3Q9UJU5 478 aaPredicted RBP9.26□□□□□ -0.93
TPM4-203ENST00000586193 BCS1LQ9Y276 419 aa9.26□□□□□ -0.93
TPM4-203ENST00000586193 RPLP1P05386 114 aaKnown RBP9.25□□□□□ -0.93
TPM4-203ENST00000586193 NR3C2P08235 984 aa9.25□□□□□ -0.93
TPM4-203ENST00000586193 USP17L7P0C7H9 530 aa9.25□□□□□ -0.93
TPM4-203ENST00000586193 NR5A1Q13285 461 aa9.25□□□□□ -0.93
TPM4-203ENST00000586193 COPRSQ9NQ92 184 aa9.25□□□□□ -0.93
TPM4-203ENST00000586193 FAM13BQ9NYF5 915 aa9.25□□□□□ -0.93
TPM4-203ENST00000586193 MRPL42Q9Y6G3 142 aaKnown RBP9.25□□□□□ -0.93
TPM4-203ENST00000586193 RNF223E7ERA6 249 aa9.24□□□□□ -0.93
TPM4-203ENST00000586193 MICAL2O94851 1124 aa9.24□□□□□ -0.93
TPM4-203ENST00000586193 CLN3Q13286 438 aa9.24□□□□□ -0.93
TPM4-203ENST00000586193 MPNDQ8N594 471 aa9.24□□□□□ -0.93
TPM4-203ENST00000586193 FAM163AQ96GL9 167 aaPredicted RBP9.24□□□□□ -0.93
TPM4-203ENST00000586193 FAM8A1Q9UBU6 413 aa9.24□□□□□ -0.93
TPM4-203ENST00000586193 TNFRSF21O75509 655 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 ADH1AP07327 375 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 TXLNAP40222 546 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 ST13P50502 369 aaKnown RBP9.23□□□□□ -0.93
TPM4-203ENST00000586193 NFE2L2Q16236 605 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 C1orf53Q5VUE5 145 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 ERMP1Q7Z2K6 904 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 CKAP2LQ8IYA6 745 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 KDF1Q8NAX2 398 aaPredicted RBP9.23□□□□□ -0.93
TPM4-203ENST00000586193 MRFAP1L1Q96HT8 127 aa9.23□□□□□ -0.93
TPM4-203ENST00000586193 MARCH6O60337 910 aa9.22□□□□□ -0.93
TPM4-203ENST00000586193 PTPROQ16827 1216 aa9.22□□□□□ -0.93
TPM4-203ENST00000586193 PPARGC1BQ86YN6 1023 aaKnown RBP9.22□□□□□ -0.93
TPM4-203ENST00000586193 NIFKQ9BYG3 293 aaKnown RBP9.22□□□□□ -0.93
TPM4-203ENST00000586193 K7ELQ4 463 aaPredicted RBP9.21□□□□□ -0.94
TPM4-203ENST00000586193 MEN1O00255 615 aa9.21□□□□□ -0.94
TPM4-203ENST00000586193 SIAH2O43255 324 aa9.21□□□□□ -0.94
TPM4-203ENST00000586193 RAB11FIP3O75154 756 aa9.21□□□□□ -0.94
TPM4-203ENST00000586193 NXPE4Q6UWF7 544 aa9.21□□□□□ -0.94
TPM4-203ENST00000586193 ANKLE1Q8NAG6 615 aa9.21□□□□□ -0.94
TPM4-203ENST00000586193 ZFYVE28Q9HCC9 887 aa9.21□□□□□ -0.94
TPM4-203ENST00000586193 RPIAP49247 311 aa9.2□□□□□ -0.94
TPM4-203ENST00000586193 CBLBQ13191 982 aa9.2□□□□□ -0.94
TPM4-203ENST00000586193 NLRP3Q96P20 1036 aa9.2□□□□□ -0.94
TPM4-203ENST00000586193 ZSCAN10Q96SZ4 725 aaPredicted RBP9.2□□□□□ -0.94
TPM4-203ENST00000586193 NPHS2Q9NP85 383 aa9.2□□□□□ -0.94
TPM4-203ENST00000586193 KBTBD4Q9NVX7 518 aa9.2□□□□□ -0.94
TPM4-203ENST00000586193 USP20Q9Y2K6 914 aa9.2□□□□□ -0.94
TPM4-203ENST00000586193 hCG_2014768A0A024R1R8 64 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
TPM4-203ENST00000586193 CLSTN1O94985 981 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 POLR3DP05423 398 aaPredicted RBP9.19□□□□□ -0.94
TPM4-203ENST00000586193 SSBP05455 408 aaKnown RBP eCLIP9.19□□□□□ -0.94
TPM4-203ENST00000586193 HSD3B2P26439 372 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 IGBP1P78318 339 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 TMEM214Q6NUQ4 689 aaKnown RBP9.19□□□□□ -0.94
TPM4-203ENST00000586193 ZNF438Q7Z4V0 828 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 RHPN1Q8TCX5 695 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 RASGRP4Q8TDF6 673 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 MICAL1Q8TDZ2 1067 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 SNX29Q8TEQ0 813 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 BCO2Q9BYV7 579 aa9.19□□□□□ -0.94
TPM4-203ENST00000586193 TGFBR3LH3BV60 316 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 CD2BP2O95400 341 aaKnown RBP9.18□□□□□ -0.94
TPM4-203ENST00000586193 PTGIRP43119 386 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 SERINC3Q13530 473 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 XKR5Q6UX68 686 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 KCNB2Q92953 911 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 SPON2Q9BUD6 331 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 ZNF408Q9H9D4 720 aa9.18□□□□□ -0.94
TPM4-203ENST00000586193 PHACTR2O75167 634 aa9.17□□□□□ -0.94
TPM4-203ENST00000586193 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
TPM4-203ENST00000586193 XRCC5P13010 732 aaKnown RBP9.17□□□□□ -0.94
TPM4-203ENST00000586193 NOL8Q76FK4 1167 aaKnown RBP9.17□□□□□ -0.94
TPM4-203ENST00000586193 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
TPM4-203ENST00000586193 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
TPM4-203ENST00000586193 SEC16BQ96JE7 1060 aa9.17□□□□□ -0.94
TPM4-203ENST00000586193 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
TPM4-203ENST00000586193 SRCIN1Q9C0H9 1055 aa9.17□□□□□ -0.94
TPM4-203ENST00000586193 GTF2E1P29083 439 aaPredicted RBP9.16□□□□□ -0.94
TPM4-203ENST00000586193 NASPP49321 788 aaPredicted RBP9.16□□□□□ -0.94
TPM4-203ENST00000586193 IDH3AP50213 366 aa9.16□□□□□ -0.94
TPM4-203ENST00000586193 NBPF6Q5VWK0 638 aa9.16□□□□□ -0.94
TPM4-203ENST00000586193 KIAA0825Q8IV33 1275 aa9.16□□□□□ -0.94
TPM4-203ENST00000586193 CMTR1Q8N1G2 835 aaKnown RBP9.16□□□□□ -0.94
TPM4-203ENST00000586193 ZNF280CQ8ND82 737 aa9.16□□□□□ -0.94
TPM4-203ENST00000586193 NBPF4Q96M43 638 aa9.16□□□□□ -0.94
TPM4-203ENST00000586193 FNDC3AQ9Y2H6 1198 aaKnown RBP9.16□□□□□ -0.94
TPM4-203ENST00000586193 F6X3S4 739 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 IBSPP21815 317 aaPredicted RBP9.15□□□□□ -0.94
TPM4-203ENST00000586193 PLA2G4AP47712 749 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 NFX1Q12986 1120 aaKnown RBP9.15□□□□□ -0.94
TPM4-203ENST00000586193 C7orf43Q8WVR3 580 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 AIDAQ96BJ3 306 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 SUSD3Q96L08 255 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 ELP3Q9H9T3 547 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 TMEM63CQ9P1W3 806 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 ADAMTS1Q9UHI8 967 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 TTF2Q9UNY4 1162 aaKnown RBP9.15□□□□□ -0.94
TPM4-203ENST00000586193 MRVI1Q9Y6F6 885 aa9.15□□□□□ -0.94
TPM4-203ENST00000586193 MINDY4BA8MYZ0 360 aa9.14□□□□□ -0.95
TPM4-203ENST00000586193 UBAP1LF5GYI3 381 aa9.14□□□□□ -0.95
TPM4-203ENST00000586193 ETFBP38117 255 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms