RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 ZNF428Q96B54 188 aa27.04■■□□□ 1.92
PTBP1-207ENST00000585932 LMNB1P20700 586 aa27.03■■□□□ 1.92
PTBP1-207ENST00000585932 PARP10Q53GL7 1025 aa27.03■■□□□ 1.92
PTBP1-207ENST00000585932 SALL2Q9Y467 1007 aaPredicted RBP27.03■■□□□ 1.92
PTBP1-207ENST00000585932 NCBP3Q53F19 620 aaKnown RBP27.02■■□□□ 1.92
PTBP1-207ENST00000585932 FAM9BQ8IZU0 186 aa27.02■■□□□ 1.92
PTBP1-207ENST00000585932 PLBD2Q8NHP8 589 aa27.02■■□□□ 1.92
PTBP1-207ENST00000585932 PHAXQ9H814 394 aaKnown RBP27.02■■□□□ 1.92
PTBP1-207ENST00000585932 NMRK2Q9NPI5 230 aa27.02■■□□□ 1.92
PTBP1-207ENST00000585932 TIAM2Q8IVF5 1701 aa27.02■■□□□ 1.92
PTBP1-207ENST00000585932 ANKRD13DQ6ZTN6 518 aa27.01■■□□□ 1.91
PTBP1-207ENST00000585932 PPP1R42Q7Z4L9 355 aa27.01■■□□□ 1.91
PTBP1-207ENST00000585932 UTP14AQ9BVJ6 771 aaKnown RBP27.01■■□□□ 1.91
PTBP1-207ENST00000585932 HYPKQ9NX55 129 aa27.01■■□□□ 1.91
PTBP1-207ENST00000585932 SNED1Q8TER0 1413 aa26.99■■□□□ 1.91
PTBP1-207ENST00000585932 IL16Q14005 1332 aa26.99■■□□□ 1.91
PTBP1-207ENST00000585932 HSP90AB3PQ58FF7 597 aa26.99■■□□□ 1.91
PTBP1-207ENST00000585932 SLC10A5Q5PT55 438 aa26.99■■□□□ 1.91
PTBP1-207ENST00000585932 LTBP3Q9NS15 1303 aa26.98■■□□□ 1.91
PTBP1-207ENST00000585932 HOXA10P31260 410 aaPredicted RBP26.98■■□□□ 1.91
PTBP1-207ENST00000585932 ISCA1Q9BUE6 129 aa26.98■■□□□ 1.91
PTBP1-207ENST00000585932 SPINK5Q9NQ38 1064 aaPredicted RBP26.98■■□□□ 1.91
PTBP1-207ENST00000585932 LAMB2P55268 1798 aa26.98■■□□□ 1.91
PTBP1-207ENST00000585932 ATP5J2-PTCD1G3V325 749 aa26.97■■□□□ 1.91
PTBP1-207ENST00000585932 TAOK3Q9H2K8 898 aa26.97■■□□□ 1.91
PTBP1-207ENST00000585932 DICER1Q9UPY3 1922 aaKnown RBP26.96■■□□□ 1.91
PTBP1-207ENST00000585932 FANCIQ9NVI1 1328 aa26.95■■□□□ 1.91
PTBP1-207ENST00000585932 TCERG1O14776 1098 aaKnown RBP26.95■■□□□ 1.9
PTBP1-207ENST00000585932 HCLS1P14317 486 aaPredicted RBP26.95■■□□□ 1.9
PTBP1-207ENST00000585932 ALDH1B1P30837 517 aa26.94■■□□□ 1.9
PTBP1-207ENST00000585932 CCDC93Q567U6 631 aa26.94■■□□□ 1.9
PTBP1-207ENST00000585932 TRMT112Q9UI30 125 aaKnown RBP26.94■■□□□ 1.9
PTBP1-207ENST00000585932 DDX60Q8IY21 1712 aaKnown RBP26.93■■□□□ 1.9
PTBP1-207ENST00000585932 ZC3H4Q9UPT8 1303 aaKnown RBP26.93■■□□□ 1.9
PTBP1-207ENST00000585932 SOGA3Q5TF21 947 aa26.93■■□□□ 1.9
PTBP1-207ENST00000585932 WDR63Q8IWG1 891 aa26.93■■□□□ 1.9
PTBP1-207ENST00000585932 RPGRQ92834 1020 aaKnown RBP26.93■■□□□ 1.9
PTBP1-207ENST00000585932 RNF123Q5XPI4 1314 aa26.92■■□□□ 1.9
PTBP1-207ENST00000585932 TWISTNBQ3B726 338 aaPredicted RBP26.92■■□□□ 1.9
PTBP1-207ENST00000585932 CCDC30Q5VVM6 783 aa26.92■■□□□ 1.9
PTBP1-207ENST00000585932 CRAMP1Q96RY5 1269 aa26.92■■□□□ 1.9
PTBP1-207ENST00000585932 SH3TC1Q8TE82 1336 aa26.91■■□□□ 1.9
PTBP1-207ENST00000585932 NLRP3Q96P20 1036 aa26.91■■□□□ 1.9
PTBP1-207ENST00000585932 COL4A1P02462 1669 aa26.89■■□□□ 1.9
PTBP1-207ENST00000585932 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
PTBP1-207ENST00000585932 FKBP4Q02790 459 aaKnown RBP eCLIP26.89■■□□□ 1.9
PTBP1-207ENST00000585932 TRIM28Q13263 835 aaKnown RBP26.89■■□□□ 1.9
PTBP1-207ENST00000585932 G2E3Q7L622 706 aa26.89■■□□□ 1.9
PTBP1-207ENST00000585932 RIC3Q7Z5B4 369 aa26.89■■□□□ 1.9
PTBP1-207ENST00000585932 FAM89AQ96GI7 184 aa26.89■■□□□ 1.9
PTBP1-207ENST00000585932 RBM17Q96I25 401 aaKnown RBP26.89■■□□□ 1.9
PTBP1-207ENST00000585932 RRAGCQ9HB90 399 aa26.89■■□□□ 1.9
PTBP1-207ENST00000585932 ZNF277Q9NRM2 450 aaPredicted RBP26.89■■□□□ 1.9
PTBP1-207ENST00000585932 ABCC4O15439 1325 aa26.89■■□□□ 1.89
PTBP1-207ENST00000585932 KDM2BQ8NHM5 1336 aa26.89■■□□□ 1.89
PTBP1-207ENST00000585932 CEP350Q5VT06 3117 aa26.88■■□□□ 1.89
PTBP1-207ENST00000585932 TAF1P21675 1872 aa26.88■■□□□ 1.89
PTBP1-207ENST00000585932 GOLGA2Q08379 1002 aa26.88■■□□□ 1.89
PTBP1-207ENST00000585932 COL4A5P29400 1685 aa26.88■■□□□ 1.89
PTBP1-207ENST00000585932 ZNF521Q96K83 1311 aa26.87■■□□□ 1.89
PTBP1-207ENST00000585932 POTECB2RU33 542 aa26.86■■□□□ 1.89
PTBP1-207ENST00000585932 PPEF1O14829 653 aaPredicted RBP26.86■■□□□ 1.89
PTBP1-207ENST00000585932 EXOSC9Q06265 439 aaKnown RBP26.86■■□□□ 1.89
PTBP1-207ENST00000585932 RTL5Q5HYW3 569 aaPredicted RBP26.86■■□□□ 1.89
PTBP1-207ENST00000585932 RTKN2Q8IZC4 609 aa26.86■■□□□ 1.89
PTBP1-207ENST00000585932 MYD88Q99836 296 aa26.86■■□□□ 1.89
PTBP1-207ENST00000585932 VAMP4O75379 141 aa26.85■■□□□ 1.89
PTBP1-207ENST00000585932 WDR90Q96KV7 1748 aa26.83■■□□□ 1.89
PTBP1-207ENST00000585932 TOMM70O94826 608 aa26.83■■□□□ 1.89
PTBP1-207ENST00000585932 JARID2Q92833 1246 aaPredicted RBP26.83■■□□□ 1.89
PTBP1-207ENST00000585932 PSMD1Q99460 953 aa26.83■■□□□ 1.89
PTBP1-207ENST00000585932 METTL22Q9BUU2 404 aaPredicted RBP26.83■■□□□ 1.89
PTBP1-207ENST00000585932 MAP3K2Q9Y2U5 619 aa26.83■■□□□ 1.89
PTBP1-207ENST00000585932 SLC4A2P04920 1241 aa26.82■■□□□ 1.88
PTBP1-207ENST00000585932 PI4KAP2A4QPH2 592 aa26.81■■□□□ 1.88
PTBP1-207ENST00000585932 IGKV5-2P06315 115 aa26.81■■□□□ 1.88
PTBP1-207ENST00000585932 CC2D2BQ6DHV5 1058 aa26.81■■□□□ 1.88
PTBP1-207ENST00000585932 PI4KAP1Q8N8J0 262 aa26.81■■□□□ 1.88
PTBP1-207ENST00000585932 STK31Q9BXU1 1019 aa26.81■■□□□ 1.88
PTBP1-207ENST00000585932 ATP6V0A2Q9Y487 856 aa26.81■■□□□ 1.88
PTBP1-207ENST00000585932 IRS4O14654 1257 aaPredicted RBP26.8■■□□□ 1.88
PTBP1-207ENST00000585932 DDNO94850 711 aaPredicted RBP26.8■■□□□ 1.88
PTBP1-207ENST00000585932 IARSP41252 1262 aaKnown RBP26.8■■□□□ 1.88
PTBP1-207ENST00000585932 KSR2Q6VAB6 950 aa26.8■■□□□ 1.88
PTBP1-207ENST00000585932 ZBTB38Q8NAP3 1195 aaPredicted RBP26.8■■□□□ 1.88
PTBP1-207ENST00000585932 CHMP4AQ9BY43 222 aa26.8■■□□□ 1.88
PTBP1-207ENST00000585932 ZNF541Q9H0D2 1346 aa26.8■■□□□ 1.88
PTBP1-207ENST00000585932 DDX58O95786 925 aaKnown RBP26.79■■□□□ 1.88
PTBP1-207ENST00000585932 SF3B3Q15393 1217 aaKnown RBP26.79■■□□□ 1.88
PTBP1-207ENST00000585932 CCDC191Q8NCU4 936 aa26.79■■□□□ 1.88
PTBP1-207ENST00000585932 GRAPQ13588 217 aa26.78■■□□□ 1.88
PTBP1-207ENST00000585932 GRAPLQ8TC17 118 aaPredicted RBP26.78■■□□□ 1.88
PTBP1-207ENST00000585932 HSPA6P17066 643 aa26.77■■□□□ 1.88
PTBP1-207ENST00000585932 DDX46Q7L014 1031 aaKnown RBP26.77■■□□□ 1.88
PTBP1-207ENST00000585932 RBM46Q8TBY0 533 aaKnown RBP26.77■■□□□ 1.88
PTBP1-207ENST00000585932 CELF1Q92879 486 aaKnown RBP26.77■■□□□ 1.88
PTBP1-207ENST00000585932 CWC25Q9NXE8 425 aaPredicted RBP26.77■■□□□ 1.88
PTBP1-207ENST00000585932 LRRC37AA6NMS7 1700 aa26.76■■□□□ 1.88
PTBP1-207ENST00000585932 BBOX1O75936 387 aa26.76■■□□□ 1.87
PTBP1-207ENST00000585932 PCCAP05165 728 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms